RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 ANO9A1A5B4 782 aa8.04□□□□□ -1.12
PKP4-217ENST00000628904 C19orf81C9J6K1 198 aa8.04□□□□□ -1.12
PKP4-217ENST00000628904 CELF2O95319 508 aaKnown RBP8.04□□□□□ -1.12
PKP4-217ENST00000628904 PRKCBP05771 671 aa8.04□□□□□ -1.12
PKP4-217ENST00000628904 CXCL8P10145 99 aa8.04□□□□□ -1.12
PKP4-217ENST00000628904 CYP11B1P15538 503 aa8.04□□□□□ -1.12
PKP4-217ENST00000628904 RPS12P25398 132 aaKnown RBP8.04□□□□□ -1.12
PKP4-217ENST00000628904 SEC24CP53992 1094 aa8.04□□□□□ -1.12
PKP4-217ENST00000628904 ZKSCAN8Q15776 578 aaPredicted RBP8.04□□□□□ -1.12
PKP4-217ENST00000628904 PARD3BQ8TEW8 1205 aa8.04□□□□□ -1.12
PKP4-217ENST00000628904 FAM149B1Q96BN6 582 aa8.04□□□□□ -1.12
PKP4-217ENST00000628904 FDXACB1Q9BRP7 624 aaPredicted RBP8.04□□□□□ -1.12
PKP4-217ENST00000628904 SYT17Q9BSW7 474 aa8.04□□□□□ -1.12
PKP4-217ENST00000628904 MYO9BQ13459 2157 aa8.04□□□□□ -1.12
PKP4-217ENST00000628904 TCRBV7S2A1N4TA0A589 114 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 POC1B-GALNT4F8VUJ3 575 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 TLR3O15455 904 aaKnown RBP8.03□□□□□ -1.12
PKP4-217ENST00000628904 SUPT20HL2P0C7V6 817 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 MYZAPP0CAP1 466 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 GTF2H1P32780 548 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 ALDH5A1P51649 535 aaPredicted RBP8.03□□□□□ -1.12
PKP4-217ENST00000628904 HSD17B4P51659 736 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 FKBP1AP62942 108 aaKnown RBP8.03□□□□□ -1.12
PKP4-217ENST00000628904 NOP14P78316 857 aaKnown RBP8.03□□□□□ -1.12
PKP4-217ENST00000628904 PLCB4Q15147 1175 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 ZNF699Q32M78 642 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 PPP6R3Q5H9R7 873 aaPredicted RBP8.03□□□□□ -1.12
PKP4-217ENST00000628904 DENND2CQ68D51 928 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 C1orf131Q8NDD1 294 aaKnown RBP8.03□□□□□ -1.12
PKP4-217ENST00000628904 ZIM3Q96PE6 472 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 PCDHB18PQ96TA0 734 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 NGRNQ9NPE2 291 aaKnown RBP8.03□□□□□ -1.12
PKP4-217ENST00000628904 OPA1O60313 960 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 RGS20O76081 388 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 ARIH2O95376 493 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 VIMP08670 466 aaKnown RBP8.03□□□□□ -1.12
PKP4-217ENST00000628904 GUCY2CP25092 1073 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 FLT3P36888 993 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 C4orf19Q8IY42 314 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 KREMEN1Q96MU8 473 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 SETD4Q9NVD3 440 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 HPCAL4Q9UM19 191 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 AFG3L2Q9Y4W6 797 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 EIF3DO15371 548 aaKnown RBP eCLIP8.03□□□□□ -1.12
PKP4-217ENST00000628904 CST3P01034 146 aaPredicted RBP8.03□□□□□ -1.12
PKP4-217ENST00000628904 TNNC2P02585 160 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 OSBPP22059 807 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 GLRA2P23416 452 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 CETN2P41208 172 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 NOVP48745 357 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 TUBB2AQ13885 445 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 FIGNQ5HY92 759 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 CCDC137Q6PK04 289 aaKnown RBP8.03□□□□□ -1.12
PKP4-217ENST00000628904 ANKRD13AQ8IZ07 590 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 USP38Q8NB14 1042 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 MDM1Q8TC05 714 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 ALG3Q92685 438 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 MCEEQ96PE7 176 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.03□□□□□ -1.123e-6■■□□□ 12.4
PKP4-217ENST00000628904 TUBB2BQ9BVA1 445 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 XPNPEP1Q9NQW7 623 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 CWC15Q9P013 229 aaKnown RBP8.03□□□□□ -1.12
PKP4-217ENST00000628904 POLIQ9UNA4 740 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 O00370 1275 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 ZRANB2O95218 330 aaKnown RBP eCLIP8.03□□□□□ -1.123e-7■■■■□ 25.7
PKP4-217ENST00000628904 CYP2C19P33261 490 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 EPHB4P54760 987 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 WNT7BP56706 349 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 GABPB1Q06547 395 aaPredicted RBP8.03□□□□□ -1.12
PKP4-217ENST00000628904 HYIQ5T013 277 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 LIN9Q5TKA1 542 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 CATSPER4Q7RTX7 472 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 CPLX4Q7Z7G2 160 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 TMEM192Q8IY95 271 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 GPC2Q8N158 579 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 MICALL1Q8N3F8 863 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 RNF10Q8N5U6 811 aaKnown RBP8.03□□□□□ -1.12
PKP4-217ENST00000628904 RBBP8NLQ8NC74 664 aaPredicted RBP8.03□□□□□ -1.12
PKP4-217ENST00000628904 AIPL1Q9NZN9 384 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 CACNG4Q9UBN1 327 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 COG5Q9UP83 839 aa8.03□□□□□ -1.12
PKP4-217ENST00000628904 ATRNL1Q5VV63 1379 aa8.02□□□□□ -1.12
PKP4-217ENST00000628904 SLC16A3O15427 465 aaKnown RBP8.02□□□□□ -1.13
PKP4-217ENST00000628904 KIAA0754O94854 1291 aa8.02□□□□□ -1.13
PKP4-217ENST00000628904 ITGB3P05106 788 aa8.02□□□□□ -1.13
PKP4-217ENST00000628904 MYL3P08590 195 aa8.02□□□□□ -1.13
PKP4-217ENST00000628904 PYGMP11217 842 aa8.02□□□□□ -1.13
PKP4-217ENST00000628904 INSRRP14616 1297 aa8.02□□□□□ -1.13
PKP4-217ENST00000628904 SEMA3FQ13275 785 aa8.02□□□□□ -1.13
PKP4-217ENST00000628904 NEDD9Q14511 834 aa8.02□□□□□ -1.13
PKP4-217ENST00000628904 SEPT7Q16181 437 aaKnown RBP8.02□□□□□ -1.13
PKP4-217ENST00000628904 EEF1DP3Q658K8 133 aa8.02□□□□□ -1.13
PKP4-217ENST00000628904 OR6B2Q6IFH4 312 aa8.02□□□□□ -1.13
PKP4-217ENST00000628904 ZC3H18Q86VM9 953 aaKnown RBP8.02□□□□□ -1.13
PKP4-217ENST00000628904 OR6B3Q8NGW1 331 aa8.02□□□□□ -1.13
PKP4-217ENST00000628904 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.02□□□□□ -1.13
PKP4-217ENST00000628904 RPGRIP1Q96KN7 1286 aa8.02□□□□□ -1.13
PKP4-217ENST00000628904 C9orf72Q96LT7 481 aa8.02□□□□□ -1.13
PKP4-217ENST00000628904 FMO2Q99518 471 aa8.02□□□□□ -1.13
PKP4-217ENST00000628904 RNPEPQ9H4A4 650 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms