RNA–Protein interactions for RNA: ENST00000622464.4

AGAP3-226, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-226ENST00000622464 TUBB4BP68371 445 aa14.05□□□□□ -0.16
AGAP3-226ENST00000622464 BRDTQ58F21 947 aaPredicted RBP14.05□□□□□ -0.16
AGAP3-226ENST00000622464 SCARA5Q6ZMJ2 495 aa14.05□□□□□ -0.16
AGAP3-226ENST00000622464 SLFN11Q7Z7L1 901 aa14.05□□□□□ -0.16
AGAP3-226ENST00000622464 ERO1BQ86YB8 467 aa14.05□□□□□ -0.16
AGAP3-226ENST00000622464 SH2D3CQ8N5H7 860 aa14.05□□□□□ -0.16
AGAP3-226ENST00000622464 DNERQ8NFT8 737 aa14.05□□□□□ -0.16
AGAP3-226ENST00000622464 OR2W6PQ8NHA6 318 aa14.05□□□□□ -0.16
AGAP3-226ENST00000622464 RNPC3Q96LT9 517 aaKnown RBP14.05□□□□□ -0.16
AGAP3-226ENST00000622464 TIPINQ9BVW5 301 aa14.05□□□□□ -0.16
AGAP3-226ENST00000622464 NUP85Q9BW27 656 aa14.05□□□□□ -0.16
AGAP3-226ENST00000622464 VNN1O95497 513 aa14.05□□□□□ -0.16
AGAP3-226ENST00000622464 CD58P19256 250 aa14.05□□□□□ -0.16
AGAP3-226ENST00000622464 EPHX2P34913 555 aa14.05□□□□□ -0.16
AGAP3-226ENST00000622464 GJC1P36383 396 aa14.05□□□□□ -0.16
AGAP3-226ENST00000622464 PDE6CP51160 858 aa14.05□□□□□ -0.16
AGAP3-226ENST00000622464 GTF2A1P52655 376 aaPredicted RBP14.05□□□□□ -0.16
AGAP3-226ENST00000622464 ANKRD13AQ8IZ07 590 aa14.05□□□□□ -0.16
AGAP3-226ENST00000622464 HES6Q96HZ4 224 aa14.05□□□□□ -0.16
AGAP3-226ENST00000622464 SPATA33Q96N06 139 aa14.05□□□□□ -0.16
AGAP3-226ENST00000622464 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.05□□□□□ -0.165e-7■■■□□ 17.7
AGAP3-226ENST00000622464 TRPC6Q9Y210 931 aa14.05□□□□□ -0.16
AGAP3-226ENST00000622464 NCANO14594 1321 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 BTNL10A8MVZ5 291 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 DAPK3O43293 454 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 CCDC172P0C7W6 258 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 GPS2Q13227 327 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 TMEM132AQ24JP5 1023 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 THNSL1Q8IYQ7 743 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 ARL8AQ96BM9 186 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 FBXL18Q96ME1 805 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 CEP89Q96ST8 783 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 MMP19Q99542 508 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 FAM118BQ9BPY3 351 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 O00370 1275 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 ORC1Q13415 861 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 TMEM270Q6UE05 265 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 AZI2Q9H6S1 392 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 C1orf112Q9NSG2 853 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 EXTL3O43909 919 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 ARL2P36404 184 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 GPC3P51654 580 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 TNNC1P63316 161 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 KCTD2Q14681 263 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 TMEM192Q8IY95 271 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 PSPC1Q8WXF1 523 aaKnown RBP14.04□□□□□ -0.16
AGAP3-226ENST00000622464 CENPHQ9H3R5 247 aa14.04□□□□□ -0.16
AGAP3-226ENST00000622464 SUCLA2Q9P2R7 463 aaPredicted RBP14.04□□□□□ -0.16
AGAP3-226ENST00000622464 ZNFX1Q9P2E3 1918 aaKnown RBP14.03□□□□□ -0.16
AGAP3-226ENST00000622464 DKC1O60832 514 aaKnown RBP eCLIP14.03□□□□□ -0.164e-8■■■■□ 20.4
AGAP3-226ENST00000622464 ATG7O95352 703 aa14.03□□□□□ -0.16
AGAP3-226ENST00000622464 CST3P01034 146 aaPredicted RBP14.03□□□□□ -0.16
AGAP3-226ENST00000622464 MCM3P25205 808 aa14.03□□□□□ -0.16
AGAP3-226ENST00000622464 GPC5P78333 572 aa14.03□□□□□ -0.16
AGAP3-226ENST00000622464 ZDHHC14Q8IZN3 488 aa14.03□□□□□ -0.16
AGAP3-226ENST00000622464 ZNF564Q8TBZ8 553 aaPredicted RBP14.03□□□□□ -0.16
AGAP3-226ENST00000622464 SCFD2Q8WU76 684 aa14.03□□□□□ -0.16
AGAP3-226ENST00000622464 SEPT1Q8WYJ6 367 aa14.03□□□□□ -0.16
AGAP3-226ENST00000622464 MTMR12Q9C0I1 747 aa14.03□□□□□ -0.16
AGAP3-226ENST00000622464 RNF19AQ9NV58 838 aa14.03□□□□□ -0.16
AGAP3-226ENST00000622464 NUB1Q9Y5A7 615 aa14.03□□□□□ -0.16
AGAP3-226ENST00000622464 SPDYE5A6NIY4 337 aa14.03□□□□□ -0.16
AGAP3-226ENST00000622464 SPOPO43791 374 aa14.03□□□□□ -0.16
AGAP3-226ENST00000622464 TXNP10599 105 aaKnown RBP14.03□□□□□ -0.16
AGAP3-226ENST00000622464 ICAM3P32942 547 aa14.03□□□□□ -0.16
AGAP3-226ENST00000622464 MOGSQ13724 837 aa14.03□□□□□ -0.16
AGAP3-226ENST00000622464 IFT20Q8IY31 132 aa14.03□□□□□ -0.16
AGAP3-226ENST00000622464 LMBR1Q8WVP7 490 aa14.03□□□□□ -0.16
AGAP3-226ENST00000622464 CYFIP2Q96F07 1278 aa14.03□□□□□ -0.16
AGAP3-226ENST00000622464 ZIM3Q96PE6 472 aa14.03□□□□□ -0.16
AGAP3-226ENST00000622464 LRRC4CQ9HCJ2 640 aa14.03□□□□□ -0.16
AGAP3-226ENST00000622464 CNOT8Q9UFF9 292 aaKnown RBP14.03□□□□□ -0.16
AGAP3-226ENST00000622464 A0A0A6YYK5 440 aaPredicted RBP14.02□□□□□ -0.16
AGAP3-226ENST00000622464 INO80B-WBP1J3KQ70 363 aa14.02□□□□□ -0.16
AGAP3-226ENST00000622464 P4HA2O15460 535 aa14.02□□□□□ -0.16
AGAP3-226ENST00000622464 RTN2O75298 545 aa14.02□□□□□ -0.16
AGAP3-226ENST00000622464 ZNF286BP0CG31 522 aa14.02□□□□□ -0.16
AGAP3-226ENST00000622464 EPHB4P54760 987 aa14.02□□□□□ -0.16
AGAP3-226ENST00000622464 ITIH3Q06033 890 aa14.02□□□□□ -0.16
AGAP3-226ENST00000622464 METTL7BQ6UX53 244 aa14.02□□□□□ -0.16
AGAP3-226ENST00000622464 SYCE1Q8N0S2 351 aa14.02□□□□□ -0.16
AGAP3-226ENST00000622464 DDX1Q92499 740 aaKnown RBP14.02□□□□□ -0.16
AGAP3-226ENST00000622464 C18orf8Q96DM3 657 aa14.02□□□□□ -0.16
AGAP3-226ENST00000622464 PBKQ96KB5 322 aa14.02□□□□□ -0.16
AGAP3-226ENST00000622464 GPR20Q99678 358 aa14.02□□□□□ -0.16
AGAP3-226ENST00000622464 C11orf70Q9BRQ4 267 aa14.02□□□□□ -0.16
AGAP3-226ENST00000622464 INO80BQ9C086 356 aaPredicted RBP14.02□□□□□ -0.16
AGAP3-226ENST00000622464 ISCUQ9H1K1 167 aa14.02□□□□□ -0.16
AGAP3-226ENST00000622464 RNPEPQ9H4A4 650 aa14.02□□□□□ -0.16
AGAP3-226ENST00000622464 MINDY3Q9H8M7 445 aa14.02□□□□□ -0.16
AGAP3-226ENST00000622464 GDF3Q9NR23 364 aa14.02□□□□□ -0.16
AGAP3-226ENST00000622464 TMEM59LQ9UK28 342 aa14.02□□□□□ -0.16
AGAP3-226ENST00000622464 AGTPBP1Q9UPW5 1226 aa14.02□□□□□ -0.16
AGAP3-226ENST00000622464 PTPN22Q9Y2R2 807 aa14.02□□□□□ -0.16
AGAP3-226ENST00000622464 PCDHB4Q9Y5E5 795 aa14.02□□□□□ -0.16
AGAP3-226ENST00000622464 MYPNQ86TC9 1320 aa14.02□□□□□ -0.17
AGAP3-226ENST00000622464 CHRM1P11229 460 aaPredicted RBP14.02□□□□□ -0.17
AGAP3-226ENST00000622464 GARTP22102 1010 aa14.02□□□□□ -0.17
AGAP3-226ENST00000622464 RRM1P23921 792 aa14.02□□□□□ -0.17
AGAP3-226ENST00000622464 EDNRBP24530 442 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms