RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 SYCE1Q8N0S2 351 aa18.83■□□□□ 0.6
TRA2A-212ENST00000621813 GPC2Q8N158 579 aa18.83■□□□□ 0.6
TRA2A-212ENST00000621813 RDH13Q8NBN7 331 aa18.83■□□□□ 0.6
TRA2A-212ENST00000621813 TAF4BQ92750 862 aa18.83■□□□□ 0.6
TRA2A-212ENST00000621813 ZNF570Q96NI8 536 aa18.83■□□□□ 0.6
TRA2A-212ENST00000621813 CYP39A1Q9NYL5 469 aa18.83■□□□□ 0.6
TRA2A-212ENST00000621813 GGA3Q9NZ52 723 aa18.83■□□□□ 0.6
TRA2A-212ENST00000621813 DNM1LO00429 736 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 DDX3XO00571 662 aaKnown RBP eCLIP18.82■□□□□ 0.64e-21■■■■■ 31.7
TRA2A-212ENST00000621813 FTCDO95954 541 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 KCNA2P16389 499 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 CCND1P24385 295 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 LBRQ14739 615 aaKnown RBP18.82■□□□□ 0.6
TRA2A-212ENST00000621813 DPY19L2Q6NUT2 758 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 ANO5Q75V66 913 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 SND1Q7KZF4 910 aaKnown RBP eCLIP18.82■□□□□ 0.6
TRA2A-212ENST00000621813 CD302Q8IX05 232 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 SLC30A5Q8TAD4 765 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 LMO3Q8TAP4 145 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 SPIRE2Q8WWL2 714 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 LZICQ8WZA0 190 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 PSMB7Q99436 277 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 NTPCRQ9BSD7 190 aaKnown RBP18.82■□□□□ 0.6
TRA2A-212ENST00000621813 OSBPL7Q9BZF2 842 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 EMSYQ7Z589 1322 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 HMGB1P1B2RPK0 211 aaPredicted RBP18.82■□□□□ 0.6
TRA2A-212ENST00000621813 SLC16A4O15374 487 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 TNFRSF8P28908 595 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 RTP1P59025 263 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 MRPS35P82673 323 aaKnown RBP18.82■□□□□ 0.6
TRA2A-212ENST00000621813 RPS6KA1Q15418 735 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 SH3D19Q5HYK7 790 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 PLA2G4FQ68DD2 849 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 MAP4K3Q8IVH8 894 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 GBP7Q8N8V2 638 aaPredicted RBP18.82■□□□□ 0.6
TRA2A-212ENST00000621813 MCPH1Q8NEM0 835 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 TRPM4Q8TD43 1214 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 CBWD1Q9BRT8 395 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 GPR88Q9GZN0 384 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 PCIF1Q9H4Z3 704 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 JPH1Q9HDC5 661 aaPredicted RBP18.82■□□□□ 0.6
TRA2A-212ENST00000621813 USP20Q9Y2K6 914 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 AFG3L2Q9Y4W6 797 aa18.82■□□□□ 0.6
TRA2A-212ENST00000621813 GOLGA6L10A0A0M3HER8 536 aa18.81■□□□□ 0.6
TRA2A-212ENST00000621813 C5orf60A6NFR6 353 aa18.81■□□□□ 0.6
TRA2A-212ENST00000621813 ALADP13716 330 aa18.81■□□□□ 0.6
TRA2A-212ENST00000621813 KIF22Q14807 665 aa18.81■□□□□ 0.6
TRA2A-212ENST00000621813 SGSM1Q2NKQ1 1148 aa18.81■□□□□ 0.6
TRA2A-212ENST00000621813 CACNA2D3Q8IZS8 1091 aa18.81■□□□□ 0.6
TRA2A-212ENST00000621813 LRRC57Q8N9N7 239 aa18.81■□□□□ 0.6
TRA2A-212ENST00000621813 TMEM161BQ8NDZ6 487 aa18.81■□□□□ 0.6
TRA2A-212ENST00000621813 PBKQ96KB5 322 aa18.81■□□□□ 0.6
TRA2A-212ENST00000621813 RNPC3Q96LT9 517 aaKnown RBP18.81■□□□□ 0.6
TRA2A-212ENST00000621813 SYT11Q9BT88 431 aa18.81■□□□□ 0.6
TRA2A-212ENST00000621813 DNAAF2Q9NVR5 837 aaKnown RBP18.81■□□□□ 0.6
TRA2A-212ENST00000621813 WDR35Q9P2L0 1181 aa18.81■□□□□ 0.6
TRA2A-212ENST00000621813 GABBR1Q9UBS5 961 aa18.81■□□□□ 0.6
TRA2A-212ENST00000621813 SLC9A2Q9UBY0 812 aa18.81■□□□□ 0.6
TRA2A-212ENST00000621813 TBX20Q9UMR3 447 aa18.81■□□□□ 0.6
TRA2A-212ENST00000621813 G3BP2Q9UN86 482 aaKnown RBP18.81■□□□□ 0.6
TRA2A-212ENST00000621813 MYH9P35579 1960 aaKnown RBP18.81■□□□□ 0.6
TRA2A-212ENST00000621813 SSC5DA1L4H1 1573 aa18.81■□□□□ 0.6
TRA2A-212ENST00000621813 H0YCG3 227 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 DGAT1O75907 488 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 NR1D1P20393 614 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 ENPEPQ07075 957 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 EPC2Q52LR7 807 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 CMPK2Q5EBM0 449 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 PHLDB3Q6NSJ2 640 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 C8orf74Q6P047 294 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 USP37Q86T82 979 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.8■□□□□ 0.65e-42■■□□□ 12
TRA2A-212ENST00000621813 TPCN2Q8NHX9 752 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 U2AF1L4Q8WU68 220 aaKnown RBP18.8■□□□□ 0.6
TRA2A-212ENST00000621813 CEP170P1Q96L14 293 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 LRRC1Q9BTT6 524 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 DOCK5Q9H7D0 1870 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 ZWILCHQ9H900 591 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 GPRC5CQ9NQ84 441 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 KMT5AQ9NQR1 393 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 LCTP09848 1927 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 PTPRFP10586 1907 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 TMEM150BA6NC51 233 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 CCDC169A6NNP5 214 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 SPDYE16A6NNV3 312 aaPredicted RBP18.8■□□□□ 0.6
TRA2A-212ENST00000621813 E7EVH7 732 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 PENKP01210 267 aaPredicted RBP18.8■□□□□ 0.6
TRA2A-212ENST00000621813 TMEM253P0C7T8 217 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 NPTX2P47972 431 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 PRAMEF18Q5VWM3 479 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 SLFN11Q7Z7L1 901 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 CHST13Q8NET6 341 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 DNERQ8NFT8 737 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 C17orf50Q8WW18 174 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 TEKT4Q8WW24 435 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 OSBPL1AQ9BXW6 950 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 STIM2Q9P246 746 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 ASB3Q9Y575 518 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 GMEB1Q9Y692 573 aa18.8■□□□□ 0.6
TRA2A-212ENST00000621813 NCANO14594 1321 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms