RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 PLCG1P19174 1290 aa27.63■■■□□ 2.01
VEGFA-229ENST00000621747 RESTQ13127 1097 aa27.63■■■□□ 2.01
VEGFA-229ENST00000621747 KARSQ15046 597 aaKnown RBP27.63■■■□□ 2.01
VEGFA-229ENST00000621747 GLRA4Q5JXX5 417 aa27.63■■■□□ 2.01
VEGFA-229ENST00000621747 CEP120Q8N960 986 aa27.63■■■□□ 2.01
VEGFA-229ENST00000621747 UROC1Q96N76 676 aa27.63■■■□□ 2.01
VEGFA-229ENST00000621747 TTPALQ9BTX7 342 aa27.63■■■□□ 2.01
VEGFA-229ENST00000621747 CLIC4Q9Y696 253 aa27.63■■■□□ 2.01
VEGFA-229ENST00000621747 TOM1L1O75674 476 aa27.62■■■□□ 2.01
VEGFA-229ENST00000621747 BRD1O95696 1058 aa27.62■■■□□ 2.01
VEGFA-229ENST00000621747 OSTNP61366 133 aa27.62■■■□□ 2.01
VEGFA-229ENST00000621747 ZXDAP98168 799 aa27.62■■■□□ 2.01
VEGFA-229ENST00000621747 CACNB1Q02641 598 aaPredicted RBP27.62■■■□□ 2.01
VEGFA-229ENST00000621747 DHX8Q14562 1220 aaKnown RBP27.62■■■□□ 2.01
VEGFA-229ENST00000621747 C15orf39Q6ZRI6 1047 aa27.62■■■□□ 2.01
VEGFA-229ENST00000621747 CMASQ8NFW8 434 aaPredicted RBP27.62■■■□□ 2.01
VEGFA-229ENST00000621747 HDAC7Q8WUI4 952 aa27.62■■■□□ 2.01
VEGFA-229ENST00000621747 RAD54LQ92698 747 aa27.62■■■□□ 2.01
VEGFA-229ENST00000621747 ACAP3Q96P50 834 aa27.62■■■□□ 2.01
VEGFA-229ENST00000621747 C2CD4DB7Z1M9 353 aa27.61■■■□□ 2.01
VEGFA-229ENST00000621747 PTPAQ15257 358 aa27.61■■■□□ 2.01
VEGFA-229ENST00000621747 FAM171A1Q5VUB5 890 aa27.61■■■□□ 2.01
VEGFA-229ENST00000621747 ZPBP2Q6X784 338 aa27.61■■■□□ 2.01
VEGFA-229ENST00000621747 TDRD5Q8NAT2 981 aaKnown RBP27.61■■■□□ 2.01
VEGFA-229ENST00000621747 REEP2Q9BRK0 252 aa27.61■■■□□ 2.01
VEGFA-229ENST00000621747 CCSER1Q9C0I3 900 aa27.61■■■□□ 2.01
VEGFA-229ENST00000621747 BLOC1S4Q9NUP1 217 aa27.61■■■□□ 2.01
VEGFA-229ENST00000621747 SLC38A7Q9NVC3 462 aa27.61■■■□□ 2.01
VEGFA-229ENST00000621747 ANKFY1Q9P2R3 1169 aa27.61■■■□□ 2.01
VEGFA-229ENST00000621747 USTQ9Y2C2 406 aa27.61■■■□□ 2.01
VEGFA-229ENST00000621747 SMIM28A0A1B0GU29 152 aa27.6■■■□□ 2.01
VEGFA-229ENST00000621747 TMEM189-UBE2V1I3L0A0 370 aa27.6■■■□□ 2.01
VEGFA-229ENST00000621747 ABLIM1O14639 778 aa27.6■■■□□ 2.01
VEGFA-229ENST00000621747 FAM13AO94988 1023 aa27.6■■■□□ 2.01
VEGFA-229ENST00000621747 KRT18P05783 430 aaKnown RBP27.6■■■□□ 2.01
VEGFA-229ENST00000621747 HARSP12081 509 aaKnown RBP27.6■■■□□ 2.01
VEGFA-229ENST00000621747 SCP2P22307 547 aa27.6■■■□□ 2.01
VEGFA-229ENST00000621747 NCKAP1LP55160 1127 aa27.6■■■□□ 2.01
VEGFA-229ENST00000621747 MCM6Q14566 821 aa27.6■■■□□ 2.01
VEGFA-229ENST00000621747 NOLC1Q14978 699 aaKnown RBP eCLIP27.6■■■□□ 2.01
VEGFA-229ENST00000621747 PTPN21Q16825 1174 aa27.6■■■□□ 2.01
VEGFA-229ENST00000621747 XKR4Q5GH76 650 aa27.6■■■□□ 2.01
VEGFA-229ENST00000621747 RTP2Q5QGT7 225 aa27.6■■■□□ 2.01
VEGFA-229ENST00000621747 PDXDC1Q6P996 788 aa27.6■■■□□ 2.01
VEGFA-229ENST00000621747 DCLRE1AQ6PJP8 1040 aa27.6■■■□□ 2.01
VEGFA-229ENST00000621747 ALKAL1Q6UXT8 129 aa27.6■■■□□ 2.01
VEGFA-229ENST00000621747 CYP26C1Q6V0L0 522 aa27.6■■■□□ 2.01
VEGFA-229ENST00000621747 CEP57Q86XR8 500 aa27.6■■■□□ 2.01
VEGFA-229ENST00000621747 PALB2Q86YC2 1186 aa27.6■■■□□ 2.01
VEGFA-229ENST00000621747 PLEKHA4Q9H4M7 779 aa27.6■■■□□ 2.01
VEGFA-229ENST00000621747 FOXD4L1Q9NU39 408 aa27.6■■■□□ 2.01
VEGFA-229ENST00000621747 B3GAT3O94766 335 aa27.59■■■□□ 2.01
VEGFA-229ENST00000621747 PRSS55Q6UWB4 352 aaPredicted RBP27.59■■■□□ 2.01
VEGFA-229ENST00000621747 TRIM67Q6ZTA4 783 aa27.59■■■□□ 2.01
VEGFA-229ENST00000621747 CCDC149Q6ZUS6 474 aa27.59■■■□□ 2.01
VEGFA-229ENST00000621747 GLYCTKQ8IVS8 523 aa27.59■■■□□ 2.01
VEGFA-229ENST00000621747 PLCD3Q8N3E9 789 aa27.59■■■□□ 2.01
VEGFA-229ENST00000621747 MYCT1Q8N699 235 aa27.59■■■□□ 2.01
VEGFA-229ENST00000621747 LRRC15Q8TF66 581 aa27.59■■■□□ 2.01
VEGFA-229ENST00000621747 PIK3R5Q8WYR1 880 aa27.59■■■□□ 2.01
VEGFA-229ENST00000621747 LARP4BQ92615 738 aaKnown RBP27.59■■■□□ 2.01
VEGFA-229ENST00000621747 BICD1Q96G01 975 aa27.59■■■□□ 2.01
VEGFA-229ENST00000621747 ZBTB45Q96K62 511 aaPredicted RBP27.59■■■□□ 2.01
VEGFA-229ENST00000621747 SNX27Q96L92 541 aa27.59■■■□□ 2.01
VEGFA-229ENST00000621747 ZSCAN16Q9H4T2 348 aaPredicted RBP27.59■■■□□ 2.01
VEGFA-229ENST00000621747 PARVGQ9HBI0 331 aa27.59■■■□□ 2.01
VEGFA-229ENST00000621747 ARIH1Q9Y4X5 557 aaPredicted RBP27.59■■■□□ 2.01
VEGFA-229ENST00000621747 SRPRBQ9Y5M8 271 aaKnown RBP27.59■■■□□ 2.01
VEGFA-229ENST00000621747 CLDN3O15551 220 aa27.58■■■□□ 2.01
VEGFA-229ENST00000621747 TGM5O43548 720 aa27.58■■■□□ 2.01
VEGFA-229ENST00000621747 RPL17P18621 184 aaKnown RBP27.58■■■□□ 2.01
VEGFA-229ENST00000621747 MARCKSP29966 332 aaPredicted RBP27.58■■■□□ 2.01
VEGFA-229ENST00000621747 CLCNKBP51801 687 aa27.58■■■□□ 2.01
VEGFA-229ENST00000621747 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.58■■■□□ 2.01
VEGFA-229ENST00000621747 HAUS6Q7Z4H7 955 aa27.58■■■□□ 2.01
VEGFA-229ENST00000621747 KCNN1Q92952 543 aa27.58■■■□□ 2.01
VEGFA-229ENST00000621747 ACSF2Q96CM8 615 aaPredicted RBP27.58■■■□□ 2.01
VEGFA-229ENST00000621747 DDX27Q96GQ7 796 aaKnown RBP27.58■■■□□ 2.01
VEGFA-229ENST00000621747 RHOBTB2Q9BYZ6 727 aa27.58■■■□□ 2.01
VEGFA-229ENST00000621747 CCDC39Q9UFE4 941 aa27.58■■■□□ 2.01
VEGFA-229ENST00000621747 FBXO2Q9UK22 296 aaPredicted RBP27.58■■■□□ 2.01
VEGFA-229ENST00000621747 MTMR6Q9Y217 621 aa27.58■■■□□ 2.01
VEGFA-229ENST00000621747 CCDC195A0A1B0GUA6 201 aa27.57■■■□□ 2
VEGFA-229ENST00000621747 TRAPPC3O43617 180 aa27.57■■■□□ 2
VEGFA-229ENST00000621747 STX6O43752 255 aa27.57■■■□□ 2
VEGFA-229ENST00000621747 TBCAO75347 108 aaKnown RBP27.57■■■□□ 2
VEGFA-229ENST00000621747 KCNE1P15382 129 aa27.57■■■□□ 2
VEGFA-229ENST00000621747 DDIT3P35638 169 aa27.57■■■□□ 2
VEGFA-229ENST00000621747 TXLNAP40222 546 aa27.57■■■□□ 2
VEGFA-229ENST00000621747 MATR3P43243 847 aaKnown RBP eCLIP27.57■■■□□ 2
VEGFA-229ENST00000621747 ZNF131P52739 623 aa27.57■■■□□ 2
VEGFA-229ENST00000621747 MCL1Q07820 350 aa27.57■■■□□ 2
VEGFA-229ENST00000621747 PSMD5Q16401 504 aa27.57■■■□□ 2
VEGFA-229ENST00000621747 UPP1Q16831 310 aa27.57■■■□□ 2
VEGFA-229ENST00000621747 FAM173BQ6P4H8 233 aa27.57■■■□□ 2
VEGFA-229ENST00000621747 ZDHHC14Q8IZN3 488 aa27.57■■■□□ 2
VEGFA-229ENST00000621747 EPSTI1Q96J88 318 aa27.57■■■□□ 2
VEGFA-229ENST00000621747 MFSD14AQ96MC6 490 aa27.57■■■□□ 2
VEGFA-229ENST00000621747 GOLGA2P5Q9HBQ8 144 aa27.57■■■□□ 2
VEGFA-229ENST00000621747 CNTN3Q9P232 1028 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms