RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 PIP4K2CQ8TBX8 421 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 MAML1Q92585 1016 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 CCDC124Q96CT7 223 aaKnown RBP10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 TUBGCP5Q96RT8 1024 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 THTPAQ9BU02 230 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 MXD3Q9BW11 206 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 RMI1Q9H9A7 625 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 DCP1AQ9NPI6 582 aaPredicted RBP10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 NARFQ9UHQ1 456 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 MYH2Q9UKX2 1941 aa10.4□□□□□ -0.74
TNFAIP3-210ENST00000620204 PSMG1O95456 288 aa10.4□□□□□ -0.75
TNFAIP3-210ENST00000620204 TTC4O95801 387 aa10.4□□□□□ -0.75
TNFAIP3-210ENST00000620204 CCNB1P14635 433 aa10.4□□□□□ -0.75
TNFAIP3-210ENST00000620204 RPL13P26373 211 aaKnown RBP10.4□□□□□ -0.75
TNFAIP3-210ENST00000620204 SH2D4BQ5SQS7 431 aa10.4□□□□□ -0.75
TNFAIP3-210ENST00000620204 SFR1Q86XK3 245 aa10.4□□□□□ -0.75
TNFAIP3-210ENST00000620204 FBXO6Q9NRD1 293 aaPredicted RBP10.4□□□□□ -0.75
TNFAIP3-210ENST00000620204 USTQ9Y2C2 406 aa10.4□□□□□ -0.75
TNFAIP3-210ENST00000620204 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.4□□□□□ -0.75
TNFAIP3-210ENST00000620204 POTEFA5A3E0 1075 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 B2RBV5 119 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 H3BRJ5 948 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 RIMBP2O15034 1052 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 DNAJC6O75061 913 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 WFS1O76024 890 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 ENO1P06733 434 aaKnown RBP10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 POTEIP0CG38 1075 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 PLS3P13797 630 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 RPS8P62241 208 aaKnown RBP10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 MYBPC3Q14896 1274 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 NFIXQ14938 502 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 CGB2Q6NT52 195 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 LVRNQ6Q4G3 990 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 POTEGQ6S5H5 508 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 POTEEQ6S8J3 1075 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 LCA5Q86VQ0 697 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 VGLL2Q8N8G2 317 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 LNX1Q8TBB1 728 aaPredicted RBP10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 WDR60Q8WVS4 1066 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 PHF12Q96QT6 1004 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 NYXQ9GZU5 481 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 NDE1Q9NXR1 346 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 DDX25Q9UHL0 483 aaKnown RBP10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 C4AP0C0L4 1744 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 C4BP0C0L5 1744 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 PLCH1Q4KWH8 1693 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 AKAP3O75969 853 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 KITP10721 976 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 ABCD1P33897 745 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 CASP5P51878 434 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 WDR4P57081 412 aaKnown RBP10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 GRAMD1BQ3KR37 738 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 KAZNQ674X7 775 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 CNKSR2Q8WXI2 1034 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 SLC7A6OSQ96CW6 309 aaPredicted RBP10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 RILPQ96NA2 401 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 CADM1Q9BY67 442 aaKnown RBP10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 CCDC134Q9H6E4 229 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 DOT1LQ8TEK3 1739 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 DDX3YO15523 660 aaKnown RBP10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 TRPA1O75762 1119 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 PRDX5P30044 214 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 SERPINB6P35237 376 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 ARFIP2P53365 341 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 EPHB1P54762 984 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 POU5F1Q01860 360 aaKnown RBP10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 PDE1CQ14123 709 aaPredicted RBP10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 ECM1Q16610 540 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 TBC1D10BQ4KMP7 808 aaPredicted RBP10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 SDCCAG8Q86SQ7 713 aaPredicted RBP10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 MAPKAPK5Q8IW41 473 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 ARHGAP18Q8N392 663 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 ZNF512BQ96KM6 892 aaPredicted RBP10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 SYNCQ9H7C4 482 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 ARL8BQ9NVJ2 186 aa10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 MYO5AQ9Y4I1 1855 aaKnown RBP10.39□□□□□ -0.75
TNFAIP3-210ENST00000620204 ABLIM1O14639 778 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 CALUO43852 315 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 OAS1P00973 400 aaKnown RBP10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 RPA3P35244 121 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 SOX5P35711 763 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 Q4G0T1 1027 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.38□□□□□ -0.758e-12■■■■□ 20.4
TNFAIP3-210ENST00000620204 SLC20A1Q8WUM9 679 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 NRG4Q8WWG1 115 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 TTC17Q96AE7 1141 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 CLPTM1LQ96KA5 538 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 TMEM47Q9BQJ4 181 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 PLVAPQ9BX97 442 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 SPZ1Q9BXG8 430 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 ZWILCHQ9H900 591 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 UBE2TQ9NPD8 197 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 ACP6Q9NPH0 428 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 ANAPC4Q9UJX5 808 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 ANGPTL2Q9UKU9 493 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 NR3C1P04150 777 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 SKIV2L2P42285 1042 aaKnown RBP10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 ADCY7P51828 1080 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 KCNA1Q09470 495 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 PKN2Q16513 984 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms