RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 SLC15A5A6NIM6 579 aa20.51■□□□□ 0.87
PSPC1-206ENST00000619300 ACKR2O00590 384 aa20.51■□□□□ 0.87
PSPC1-206ENST00000619300 FAM189A1O60320 539 aa20.51■□□□□ 0.87
PSPC1-206ENST00000619300 FTLP02792 175 aaPredicted RBP20.51■□□□□ 0.87
PSPC1-206ENST00000619300 CYP11B1P15538 503 aa20.51■□□□□ 0.87
PSPC1-206ENST00000619300 IGBP1P78318 339 aa20.51■□□□□ 0.87
PSPC1-206ENST00000619300 MCL1Q07820 350 aa20.51■□□□□ 0.87
PSPC1-206ENST00000619300 CFAP221Q4G0U5 840 aa20.51■□□□□ 0.87
PSPC1-206ENST00000619300 SEZ6Q53EL9 994 aa20.51■□□□□ 0.87
PSPC1-206ENST00000619300 SYCE1Q8N0S2 351 aa20.51■□□□□ 0.87
PSPC1-206ENST00000619300 SPATA4Q8NEY3 305 aa20.51■□□□□ 0.87
PSPC1-206ENST00000619300 ABHD16BQ9H3Z7 469 aa20.51■□□□□ 0.87
PSPC1-206ENST00000619300 MAGEB2O15479 319 aa20.5■□□□□ 0.87
PSPC1-206ENST00000619300 VNN1O95497 513 aa20.5■□□□□ 0.87
PSPC1-206ENST00000619300 ITGBL1O95965 494 aaPredicted RBP20.5■□□□□ 0.87
PSPC1-206ENST00000619300 GZMAP12544 262 aa20.5■□□□□ 0.87
PSPC1-206ENST00000619300 PIK3CAP42336 1068 aa20.5■□□□□ 0.87
PSPC1-206ENST00000619300 PTENP60484 403 aa20.5■□□□□ 0.87
PSPC1-206ENST00000619300 ACVR2BQ13705 512 aa20.5■□□□□ 0.87
PSPC1-206ENST00000619300 DUSP28Q4G0W2 176 aa20.5■□□□□ 0.87
PSPC1-206ENST00000619300 TSHZ1Q6ZSZ6 1077 aa20.5■□□□□ 0.87
PSPC1-206ENST00000619300 BRSK2Q8IWQ3 736 aa20.5■□□□□ 0.87
PSPC1-206ENST00000619300 MMGT1Q8N4V1 131 aa20.5■□□□□ 0.87
PSPC1-206ENST00000619300 HNRNPLLQ8WVV9 542 aaKnown RBP20.5■□□□□ 0.87
PSPC1-206ENST00000619300 PCDHB18PQ96TA0 734 aa20.5■□□□□ 0.87
PSPC1-206ENST00000619300 C16orf70Q9BSU1 422 aa20.5■□□□□ 0.87
PSPC1-206ENST00000619300 THAP2Q9H0W7 228 aa20.5■□□□□ 0.87
PSPC1-206ENST00000619300 ACP6Q9NPH0 428 aa20.5■□□□□ 0.87
PSPC1-206ENST00000619300 PLXNA1Q9UIW2 1896 aa20.5■□□□□ 0.87
PSPC1-206ENST00000619300 ABLIM1O14639 778 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 OGTO15294 1046 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 RTN2O75298 545 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 SEC31AO94979 1220 aaKnown RBP20.49■□□□□ 0.87
PSPC1-206ENST00000619300 SMPD1P17405 629 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 C2orf54Q08AI8 447 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 TAF3Q5VWG9 929 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 IQSEC1Q6DN90 963 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 NPLOC4Q8TAT6 608 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 DHX38Q92620 1227 aaKnown RBP20.49■□□□□ 0.87
PSPC1-206ENST00000619300 TAF4BQ92750 862 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 MS4A14Q96JA4 679 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 GOLPH3Q9H4A6 298 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 SLC5A4Q9NY91 659 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 OGFRQ9NZT2 677 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 INO80B-WBP1J3KQ70 363 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 KIF4AO95239 1232 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 TNFSF9P41273 254 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 DNA2P51530 1060 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 CDR2Q01850 454 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 POU5F1BQ06416 359 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 GRM1Q13255 1194 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 WDR93Q6P2C0 686 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 DAAM2Q86T65 1068 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 ARHGEF26Q96DR7 871 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 ZNF668Q96K58 619 aaPredicted RBP20.49■□□□□ 0.87
PSPC1-206ENST00000619300 NFKBIZQ9BYH8 718 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 INO80BQ9C086 356 aaPredicted RBP20.49■□□□□ 0.87
PSPC1-206ENST00000619300 PTPRHQ9HD43 1115 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 OSGEPQ9NPF4 335 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 CPA4Q9UI42 421 aa20.49■□□□□ 0.87
PSPC1-206ENST00000619300 TARSL2A2RTX5 802 aaKnown RBP20.48■□□□□ 0.87
PSPC1-206ENST00000619300 CES2O00748 559 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 ATP8B1O43520 1251 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 MMEP08473 750 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 ZNF286BP0CG31 522 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 KRT5P13647 590 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 PROZP22891 400 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 PDE6CP51160 858 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 AP3M2P53677 418 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 VSNL1P62760 191 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 FMO1Q01740 532 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 PEX26Q7Z412 305 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 MSL3Q8N5Y2 521 aaKnown RBP20.48■□□□□ 0.87
PSPC1-206ENST00000619300 OR5B17Q8NGF7 314 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 NMRK2Q9NPI5 230 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 SMARCAL1Q9NZC9 954 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 EHD2Q9NZN4 543 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 STXBP5LQ9Y2K9 1186 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 SPDYE4A6NLX3 237 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 H3BRB1 525 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 MBTD1Q05BQ5 628 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 TCEAL1Q15170 157 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 ATF7IP2Q5U623 682 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 MPZL3Q6UWV2 235 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 LINC01465Q8N7H1 131 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 DDX1Q92499 740 aaKnown RBP20.48■□□□□ 0.87
PSPC1-206ENST00000619300 TUT1Q9H6E5 874 aaKnown RBP20.48■□□□□ 0.87
PSPC1-206ENST00000619300 FAM53CQ9NYF3 392 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 CPSF3Q9UKF6 684 aaKnown RBP20.48■□□□□ 0.87
PSPC1-206ENST00000619300 ZHX1Q9UKY1 873 aaPredicted RBP20.48■□□□□ 0.87
PSPC1-206ENST00000619300 COL1A2P08123 1366 aa20.48■□□□□ 0.87
PSPC1-206ENST00000619300 PHACTR2O75167 634 aa20.47■□□□□ 0.87
PSPC1-206ENST00000619300 ERLIN1O75477 346 aa20.47■□□□□ 0.87
PSPC1-206ENST00000619300 GPC5P78333 572 aa20.47■□□□□ 0.87
PSPC1-206ENST00000619300 NT5DC3Q86UY8 548 aa20.47■□□□□ 0.87
PSPC1-206ENST00000619300 WDR49Q8IV35 697 aa20.47■□□□□ 0.87
PSPC1-206ENST00000619300 RHOT2Q8IXI1 618 aa20.47■□□□□ 0.87
PSPC1-206ENST00000619300 PBKQ96KB5 322 aa20.47■□□□□ 0.87
PSPC1-206ENST00000619300 CALR3Q96L12 384 aaKnown RBP20.47■□□□□ 0.87
PSPC1-206ENST00000619300 MINDY3Q9H8M7 445 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms