RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 SPATC1LQ9H0A9 340 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 BHMT2Q9H2M3 363 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 PXMP2Q9NR77 195 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 AIPL1Q9NZN9 384 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 NAGPAQ9UK23 515 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 EML1O00423 815 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 ACTN1P12814 892 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 CHN1P15882 459 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 RPA1P27694 616 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 SLCO1A2P46721 670 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 KCNMA1Q12791 1236 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 OTOP1Q7RTM1 612 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 MDM1Q8TC05 714 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 TRIM51Q9BSJ1 452 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 CELF4Q9BZC1 486 aaKnown RBP7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 BTBD7Q9P203 1132 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 FBXO40Q9UH90 709 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 TPX2Q9ULW0 747 aaKnown RBP7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 AGTPBP1Q9UPW5 1226 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 STK38LQ9Y2H1 464 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 DIS3Q9Y2L1 958 aaKnown RBP7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 MYPNQ86TC9 1320 aa7.49□□□□□ -1.21
SRGAP3-213ENST00000618999 CCL15-CCL14A0A0B4J2E2 113 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 FAM170AA1A519 330 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 FAM13AO94988 1023 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 ANXA13P27216 316 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 PDE6CP51160 858 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 CRYMQ14894 314 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 CCL15Q16663 113 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 ASTE1Q2TB18 679 aaPredicted RBP7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 PCNX4Q63HM2 1172 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 TMC3Q7Z5M5 1100 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 TRIM59Q8IWR1 403 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 CHST13Q8NET6 341 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 REPS2Q8NFH8 660 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 TPCN2Q8NHX9 752 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 TATDN2Q93075 761 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 KLHL29Q96CT2 875 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 RUNDC3BQ96NL0 473 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 CYP39A1Q9NYL5 469 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 NOP53Q9NZM5 478 aaKnown RBP7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 SUCLA2Q9P2R7 463 aaPredicted RBP7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 SNX24Q9Y343 169 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 DICER1Q9UPY3 1922 aaKnown RBP7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 F8VZ95 297 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 RASGRF2O14827 1237 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 RASSF9O75901 435 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 CYP2C8P10632 490 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 GHRP10912 638 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 PSMC6P62333 389 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 MRPS9P82933 396 aaKnown RBP7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 GRM1Q13255 1194 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 SLMAPQ14BN4 828 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 EDRF1Q3B7T1 1238 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 GNPTABQ3T906 1256 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 EEPD1Q7L9B9 569 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 SAMD3Q8N6K7 520 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 SLC5A5Q92911 643 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 MPHOSPH6Q99547 160 aaKnown RBP7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 UNC45AQ9H3U1 944 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 AZI2Q9H6S1 392 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 NOD2Q9HC29 1040 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 NKIRAS1Q9NYS0 192 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 ADAMTS5Q9UNA0 930 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 FRMD4BQ9Y2L6 1034 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 NPHP3-ACAD11A0A0J9YXS1 232 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 FAM187AA6NFU0 413 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 HGSO14964 777 aaPredicted RBP7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 TLR2O60603 784 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 PSMD10O75832 226 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 HSPA6P17066 643 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 SLC9A1P19634 815 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 HUNKP57058 714 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 CNTN2Q02246 1040 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 KCTD2Q14681 263 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 TMEM119Q4V9L6 283 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 LDLRAD1Q5T700 205 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 SEPT14Q6ZU15 432 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 INTS8Q75QN2 995 aaKnown RBP7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 FRMD5Q7Z6J6 570 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 SYCP3Q8IZU3 236 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 GBP7Q8N8V2 638 aaPredicted RBP7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 ANKRD42Q8N9B4 389 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 FBF1Q8TES7 1133 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 PIK3R5Q8WYR1 880 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 RIT2Q99578 217 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 CCDC77Q9BR77 488 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 FAM129AQ9BZQ8 928 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 PIF1Q9H611 641 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 ATP6V0A4Q9HBG4 840 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 MCM8Q9UJA3 840 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 VAV3Q9UKW4 847 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 PNMA3Q9UL41 463 aa7.48□□□□□ -1.21
SRGAP3-213ENST00000618999 SPOPO43791 374 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 SCP2P22307 547 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 SETDB1Q15047 1291 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 MAEAQ7L5Y9 396 aa7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 ZNF571Q7Z3V5 609 aaPredicted RBP7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 PAIP2Q9BPZ3 127 aaKnown RBP7.47□□□□□ -1.21
SRGAP3-213ENST00000618999 MOV10L1Q9BXT6 1211 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms