RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 CEP120Q8N960 986 aa23.99■■□□□ 1.43
TRAF4-217ENST00000618771 TMEM161BQ8NDZ6 487 aa23.99■■□□□ 1.43
TRAF4-217ENST00000618771 LRRC15Q8TF66 581 aa23.99■■□□□ 1.43
TRAF4-217ENST00000618771 B3GALT6Q96L58 329 aa23.99■■□□□ 1.43
TRAF4-217ENST00000618771 CCDC94Q9BW85 323 aaPredicted RBP23.99■■□□□ 1.43
TRAF4-217ENST00000618771 CHST7Q9NS84 486 aa23.99■■□□□ 1.43
TRAF4-217ENST00000618771 BLOC1S4Q9NUP1 217 aa23.99■■□□□ 1.43
TRAF4-217ENST00000618771 LARSQ9P2J5 1176 aaKnown RBP23.99■■□□□ 1.43
TRAF4-217ENST00000618771 MTMR6Q9Y217 621 aa23.99■■□□□ 1.43
TRAF4-217ENST00000618771 TEX28O15482 410 aa23.98■■□□□ 1.43
TRAF4-217ENST00000618771 MARCKSP29966 332 aaPredicted RBP23.98■■□□□ 1.43
TRAF4-217ENST00000618771 GRM5P41594 1212 aa23.98■■□□□ 1.43
TRAF4-217ENST00000618771 PTPN5P54829 565 aa23.98■■□□□ 1.43
TRAF4-217ENST00000618771 USP41Q3LFD5 358 aa23.98■■□□□ 1.43
TRAF4-217ENST00000618771 GLRA4Q5JXX5 417 aa23.98■■□□□ 1.43
TRAF4-217ENST00000618771 ZBTB33Q86T24 672 aa23.98■■□□□ 1.43
TRAF4-217ENST00000618771 FBXL6Q8N531 539 aa23.98■■□□□ 1.43
TRAF4-217ENST00000618771 HASPINQ8TF76 798 aa23.98■■□□□ 1.43
TRAF4-217ENST00000618771 REEP2Q9BRK0 252 aa23.98■■□□□ 1.43
TRAF4-217ENST00000618771 TCHPQ9BT92 498 aa23.98■■□□□ 1.43
TRAF4-217ENST00000618771 CCSER1Q9C0I3 900 aa23.98■■□□□ 1.43
TRAF4-217ENST00000618771 SFXN1Q9H9B4 322 aa23.98■■□□□ 1.43
TRAF4-217ENST00000618771 RXFP1Q9HBX9 757 aa23.98■■□□□ 1.43
TRAF4-217ENST00000618771 TOPORSQ9NS56 1045 aaPredicted RBP23.98■■□□□ 1.43
TRAF4-217ENST00000618771 ODF2LQ9ULJ1 636 aa23.98■■□□□ 1.43
TRAF4-217ENST00000618771 SF3B1O75533 1304 aaKnown RBP eCLIP23.98■■□□□ 1.433e-6■■■■□ 20.7
TRAF4-217ENST00000618771 SPDYE4A6NLX3 237 aa23.97■■□□□ 1.43
TRAF4-217ENST00000618771 KIF4AO95239 1232 aa23.97■■□□□ 1.43
TRAF4-217ENST00000618771 WEE2P0C1S8 567 aa23.97■■□□□ 1.43
TRAF4-217ENST00000618771 MAPTP10636 758 aaKnown RBP23.97■■□□□ 1.43
TRAF4-217ENST00000618771 MCF2P10911 925 aa23.97■■□□□ 1.43
TRAF4-217ENST00000618771 PROZP22891 400 aa23.97■■□□□ 1.43
TRAF4-217ENST00000618771 MTHFRP42898 656 aa23.97■■□□□ 1.43
TRAF4-217ENST00000618771 YARSP54577 528 aaKnown RBP23.97■■□□□ 1.43
TRAF4-217ENST00000618771 OSTNP61366 133 aa23.97■■□□□ 1.43
TRAF4-217ENST00000618771 SIGLEC14Q08ET2 396 aa23.97■■□□□ 1.43
TRAF4-217ENST00000618771 KANK3Q6NY19 840 aa23.97■■□□□ 1.43
TRAF4-217ENST00000618771 MPZL3Q6UWV2 235 aa23.97■■□□□ 1.43
TRAF4-217ENST00000618771 GPR65Q8IYL9 337 aa23.97■■□□□ 1.43
TRAF4-217ENST00000618771 RAD54LQ92698 747 aa23.97■■□□□ 1.43
TRAF4-217ENST00000618771 SNX21Q969T3 373 aa23.97■■□□□ 1.43
TRAF4-217ENST00000618771 RIPOR3Q96MK2 946 aa23.97■■□□□ 1.43
TRAF4-217ENST00000618771 POMKQ9H5K3 350 aa23.97■■□□□ 1.43
TRAF4-217ENST00000618771 FBXO2Q9UK22 296 aaPredicted RBP23.97■■□□□ 1.43
TRAF4-217ENST00000618771 H0YCG3 227 aa23.96■■□□□ 1.43
TRAF4-217ENST00000618771 ABLIM1O14639 778 aa23.96■■□□□ 1.43
TRAF4-217ENST00000618771 STX6O43752 255 aa23.96■■□□□ 1.43
TRAF4-217ENST00000618771 BRD1O95696 1058 aa23.96■■□□□ 1.43
TRAF4-217ENST00000618771 CEBPZQ03701 1054 aaKnown RBP23.96■■□□□ 1.43
TRAF4-217ENST00000618771 MCM6Q14566 821 aa23.96■■□□□ 1.43
TRAF4-217ENST00000618771 RIN2Q8WYP3 895 aaPredicted RBP23.96■■□□□ 1.43
TRAF4-217ENST00000618771 PPP1R10Q96QC0 940 aaKnown RBP23.96■■□□□ 1.43
TRAF4-217ENST00000618771 PRRX2Q99811 253 aa23.96■■□□□ 1.43
TRAF4-217ENST00000618771 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.96■■□□□ 1.43
TRAF4-217ENST00000618771 GTF3C3Q9Y5Q9 886 aa23.96■■□□□ 1.43
TRAF4-217ENST00000618771 TOM1L1O75674 476 aa23.95■■□□□ 1.42
TRAF4-217ENST00000618771 FAM13AO94988 1023 aa23.95■■□□□ 1.42
TRAF4-217ENST00000618771 GLUD1P00367 558 aa23.95■■□□□ 1.42
TRAF4-217ENST00000618771 KRT18P05783 430 aaKnown RBP23.95■■□□□ 1.42
TRAF4-217ENST00000618771 HARSP12081 509 aaKnown RBP23.95■■□□□ 1.42
TRAF4-217ENST00000618771 SP100P23497 879 aaPredicted RBP23.95■■□□□ 1.42
TRAF4-217ENST00000618771 NCKAP1LP55160 1127 aa23.95■■□□□ 1.42
TRAF4-217ENST00000618771 SPECC1Q5M775 1068 aa23.95■■□□□ 1.42
TRAF4-217ENST00000618771 ATAT1Q5SQI0 421 aa23.95■■□□□ 1.42
TRAF4-217ENST00000618771 TMC5Q6UXY8 1006 aa23.95■■□□□ 1.42
TRAF4-217ENST00000618771 ZPBP2Q6X784 338 aa23.95■■□□□ 1.42
TRAF4-217ENST00000618771 USP49Q70CQ1 688 aa23.95■■□□□ 1.42
TRAF4-217ENST00000618771 LARP4BQ92615 738 aaKnown RBP23.95■■□□□ 1.42
TRAF4-217ENST00000618771 EPSTI1Q96J88 318 aa23.95■■□□□ 1.42
TRAF4-217ENST00000618771 ZSCAN16Q9H4T2 348 aaPredicted RBP23.95■■□□□ 1.42
TRAF4-217ENST00000618771 TSHZ2Q9NRE2 1034 aa23.95■■□□□ 1.42
TRAF4-217ENST00000618771 ANKFY1Q9P2R3 1169 aa23.95■■□□□ 1.42
TRAF4-217ENST00000618771 NR2E1Q9Y466 385 aa23.95■■□□□ 1.42
TRAF4-217ENST00000618771 SRPRBQ9Y5M8 271 aaKnown RBP23.95■■□□□ 1.42
TRAF4-217ENST00000618771 KMT2EQ8IZD2 1858 aa23.94■■□□□ 1.42
TRAF4-217ENST00000618771 USP34Q70CQ2 3546 aa23.94■■□□□ 1.42
TRAF4-217ENST00000618771 CREMQ03060 361 aa23.94■■□□□ 1.42
TRAF4-217ENST00000618771 TCF15Q12870 199 aa23.94■■□□□ 1.42
TRAF4-217ENST00000618771 NOLC1Q14978 699 aaKnown RBP eCLIP23.94■■□□□ 1.42
TRAF4-217ENST00000618771 ASIC4Q96FT7 647 aa23.94■■□□□ 1.42
TRAF4-217ENST00000618771 ZBTB45Q96K62 511 aaPredicted RBP23.94■■□□□ 1.42
TRAF4-217ENST00000618771 ACAP3Q96P50 834 aa23.94■■□□□ 1.42
TRAF4-217ENST00000618771 USP28Q96RU2 1077 aa23.94■■□□□ 1.42
TRAF4-217ENST00000618771 MAN1C1Q9NR34 630 aa23.94■■□□□ 1.42
TRAF4-217ENST00000618771 CACNA1HO95180 2353 aa23.93■■□□□ 1.42
TRAF4-217ENST00000618771 SMIM28A0A1B0GU29 152 aa23.93■■□□□ 1.42
TRAF4-217ENST00000618771 ZNF131P52739 623 aa23.93■■□□□ 1.42
TRAF4-217ENST00000618771 ELAVL2Q12926 359 aaKnown RBP23.93■■□□□ 1.42
TRAF4-217ENST00000618771 PTPN21Q16825 1174 aa23.93■■□□□ 1.42
TRAF4-217ENST00000618771 XKR4Q5GH76 650 aa23.93■■□□□ 1.42
TRAF4-217ENST00000618771 RTP2Q5QGT7 225 aa23.93■■□□□ 1.42
TRAF4-217ENST00000618771 FAM171A1Q5VUB5 890 aa23.93■■□□□ 1.42
TRAF4-217ENST00000618771 ELMSAN1Q6PJG2 1045 aa23.93■■□□□ 1.42
TRAF4-217ENST00000618771 ALKAL1Q6UXT8 129 aa23.93■■□□□ 1.42
TRAF4-217ENST00000618771 HAUS6Q7Z4H7 955 aa23.93■■□□□ 1.42
TRAF4-217ENST00000618771 GPR149Q86SP6 731 aa23.93■■□□□ 1.42
TRAF4-217ENST00000618771 HSCBQ8IWL3 235 aa23.93■■□□□ 1.42
TRAF4-217ENST00000618771 MYCT1Q8N699 235 aa23.93■■□□□ 1.42
TRAF4-217ENST00000618771 KCNN1Q92952 543 aa23.93■■□□□ 1.42
TRAF4-217ENST00000618771 BICD1Q96G01 975 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms