RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 FDXACB1Q9BRP7 624 aaPredicted RBP5.12□□□□□ -1.59
SNCA-213ENST00000618500 PLA2G2FQ9BZM2 168 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 GPSM3Q9Y4H4 160 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 COL4A3BPQ9Y5P4 624 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 LYPLA2O95372 231 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 PAX3P23760 479 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 MCM5P33992 734 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 NAPAP54920 295 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 ZNF252P-AS1Q0IIN9 211 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 PPP2R5CQ13362 524 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 CCINQ13939 588 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 PSMD5Q16401 504 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 PFKFB3Q16875 520 aaPredicted RBP5.12□□□□□ -1.59
SNCA-213ENST00000618500 SOWAHCQ53LP3 525 aaPredicted RBP5.12□□□□□ -1.59
SNCA-213ENST00000618500 VITQ6UXI7 678 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 FANCBQ8NB91 859 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 GSTCDQ8NEC7 633 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 SMARCD2Q92925 531 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 PRIMPOLQ96LW4 560 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 KXD1Q9BQD3 176 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 TRMT61BQ9BVS5 477 aaKnown RBP5.12□□□□□ -1.59
SNCA-213ENST00000618500 LMAN1LQ9HAT1 526 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 TPCN1Q9ULQ1 816 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 COL5A1P20908 1838 aaPredicted RBP5.11□□□□□ -1.59
SNCA-213ENST00000618500 CCDC69A6NI79 296 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 PSMC3P17980 439 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 FNTBP49356 437 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 HNRNPUQ00839 825 aaKnown RBP eCLIP5.11□□□□□ -1.59
SNCA-213ENST00000618500 RING1Q06587 406 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 COL9A3Q14050 684 aaPredicted RBP5.11□□□□□ -1.59
SNCA-213ENST00000618500 MXD4Q14582 209 aaPredicted RBP5.11□□□□□ -1.59
SNCA-213ENST00000618500 PTPAQ15257 358 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 UGCGQ16739 394 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 ANKRD45Q5TZF3 282 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 CASC1Q6TDU7 716 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 LRRC71Q8N4P6 559 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 DAGLBQ8NCG7 672 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 GLIS3Q8NEA6 775 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 BEST2Q8NFU1 509 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 EXOC4Q96A65 974 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 ZFP14Q9HCL3 533 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 PKD2L1Q9P0L9 805 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 MYO15AQ9UKN7 3530 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 BCLAF3A2AJT9 711 aaKnown RBP5.11□□□□□ -1.59
SNCA-213ENST00000618500 MEIS3P2A8K0S8 358 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 RHOP08100 348 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 CEBPBP17676 345 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 ZNF76P36508 570 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 MPLP40238 635 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 OR1G1P47890 313 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 PTENP60484 403 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 PSMC5P62195 406 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 TFDP1Q14186 410 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 MRPL58Q14197 206 aaKnown RBP5.11□□□□□ -1.59
SNCA-213ENST00000618500 GAS6Q14393 721 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 ZNF423Q2M1K9 1284 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 XKR4Q5GH76 650 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 CDCA2Q69YH5 1023 aaPredicted RBP5.11□□□□□ -1.59
SNCA-213ENST00000618500 TYW1BQ6NUM6 668 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 CWC27Q6UX04 472 aaKnown RBP5.11□□□□□ -1.59
SNCA-213ENST00000618500 ANKS3Q6ZW76 656 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 HEATR3Q7Z4Q2 680 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 RAB44Q7Z6P3 723 aaPredicted RBP5.11□□□□□ -1.59
SNCA-213ENST00000618500 C4orf19Q8IY42 314 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 RNF169Q8NCN4 708 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 NAP1L4Q99733 375 aaKnown RBP5.11□□□□□ -1.59
SNCA-213ENST00000618500 APOL6Q9BWW8 343 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 GPR62Q9BZJ7 368 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 UNC45AQ9H3U1 944 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 GINS2Q9Y248 185 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 PIAS3Q9Y6X2 628 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 MYO7AQ13402 2215 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 MUC22E2RYF6 1773 aaPredicted RBP5.11□□□□□ -1.59
SNCA-213ENST00000618500 DMDP11532 3685 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 PHLPP2Q6ZVD8 1323 aa5.11□□□□□ -1.59
SNCA-213ENST00000618500 SMCO2A6NFE2 343 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 CAPN8A6NHC0 703 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 RBAK-RBAKDNI3L0D1 243 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 SYN3O14994 580 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 TBX3O15119 743 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 MSH4O15457 936 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 PRC1O43663 620 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 RPP40O75818 363 aaKnown RBP5.1□□□□□ -1.59
SNCA-213ENST00000618500 TCF3P15923 654 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 GNA11P29992 359 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 MBTD1Q05BQ5 628 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 TSGA10IPQ3SY00 556 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 ARHGAP29Q52LW3 1261 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 WDR44Q5JSH3 913 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 FAM78AQ5JUQ0 283 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 RTP2Q5QGT7 225 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 TANGO2Q6ICL3 276 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 SLC27A1Q6PCB7 646 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 TSSK4Q6SA08 328 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 CCDC26Q8TAB7 109 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 PSPC1Q8WXF1 523 aaKnown RBP5.1□□□□□ -1.59
SNCA-213ENST00000618500 C6orf50Q9HD87 102 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 HEBP1Q9NRV9 189 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 INPP5FQ9Y2H2 1132 aa5.1□□□□□ -1.59
SNCA-213ENST00000618500 NUP205Q92621 2012 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms