RNA–Protein interactions for RNA: ENST00000617848.4

CNTNAP3B-213, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 290 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-213ENST00000617848 ERO1AQ96HE7 468 aa9.45□□□□□ -0.9
CNTNAP3B-213ENST00000617848 FAM81BQ96LP2 452 aa9.45□□□□□ -0.9
CNTNAP3B-213ENST00000617848 SCLT1Q96NL6 688 aa9.45□□□□□ -0.9
CNTNAP3B-213ENST00000617848 CGRRF1Q99675 332 aa9.45□□□□□ -0.9
CNTNAP3B-213ENST00000617848 GCOM2Q9BZD3 368 aaPredicted RBP9.45□□□□□ -0.9
CNTNAP3B-213ENST00000617848 ADAMTS10Q9H324 1103 aa9.45□□□□□ -0.9
CNTNAP3B-213ENST00000617848 PDE11AQ9HCR9 933 aa9.45□□□□□ -0.9
CNTNAP3B-213ENST00000617848 UBE2TQ9NPD8 197 aaPredicted RBP9.45□□□□□ -0.9
CNTNAP3B-213ENST00000617848 TOPORSQ9NS56 1045 aaPredicted RBP9.45□□□□□ -0.9
CNTNAP3B-213ENST00000617848 RAB20Q9NX57 234 aa9.45□□□□□ -0.9
CNTNAP3B-213ENST00000617848 RBAKQ9NYW8 714 aaPredicted RBP9.45□□□□□ -0.9
CNTNAP3B-213ENST00000617848 MYADML2A6NDP7 307 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 B4GALT5O43286 388 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 FAM189A1O60320 539 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 FKTNO75072 461 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 ZC3H11AO75152 810 aaKnown RBP eCLIP9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 HMGCRP04035 888 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 MCF2P10911 925 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 ANXA13P27216 316 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 CCND3P30281 292 aaPredicted RBP9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 MAGEA1P43355 309 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 KIF11P52732 1056 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 MFAP3P55082 362 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 PRMT2P55345 433 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 ETF1P62495 437 aaKnown RBP9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 CAP1Q01518 475 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 NCBP1Q09161 790 aaKnown RBP9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 PCBP1Q15365 356 aaKnown RBP eCLIP9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 AMHR2Q16671 573 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 ARHGAP44Q17R89 818 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 ASTE1Q2TB18 679 aaPredicted RBP9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 ZNF568Q3ZCX4 644 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 ARHGAP29Q52LW3 1261 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 ZBTB41Q5SVQ8 909 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 EEF1DP3Q658K8 133 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 KIAA1328Q86T90 577 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 THNSL1Q8IYQ7 743 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 C7orf31Q8N865 590 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 KIF18AQ8NI77 898 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 RAET1EQ8TD07 263 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 TAS1R2Q8TE23 839 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 PXYLP1Q8TE99 480 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 SEMA4DQ92854 862 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 NT5C1BQ96P26 610 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 PPP1R16BQ96T49 567 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 FAM49AQ9H0Q0 323 aaPredicted RBP9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 CDT1Q9H211 546 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 HAUS4Q9H6D7 363 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 LUC7LQ9NQ29 371 aaKnown RBP9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 HDAC6Q9UBN7 1215 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 AJAP1Q9UKB5 411 aaPredicted RBP9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 CPSF3Q9UKF6 684 aaKnown RBP9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 REXO2Q9Y3B8 237 aaKnown RBP9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 R3HCC1Q9Y3T6 440 aaKnown RBP9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 PAXBP1Q9Y5B6 917 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 PCDHA13Q9Y5I0 950 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 CNTNAP2Q9UHC6 1331 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 MGAMO43451 1857 aa9.44□□□□□ -0.9
CNTNAP3B-213ENST00000617848 SRCAPQ6ZRS2 3230 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 SIP14410 1827 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 F8VZ95 297 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 RBAK-RBAKDNI3L0D1 243 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 TREHO43280 583 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 KIF5CO60282 957 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 TSPAN1O60635 241 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 ADAMTS4O75173 837 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 GPR32O75388 356 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 GFPT2O94808 682 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 ERLIN2O94905 339 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 IL18RAPO95256 599 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 PGK1P00558 417 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 HLA-DRAP01903 254 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 CLTAP09496 248 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 IQCF3P0C7M6 154 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 ELNP15502 786 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 ARF4P18085 180 aaPredicted RBP9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 HOXC8P31273 242 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 TNFSF9P41273 254 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 ARHGAP25P42331 645 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 VAV2P52735 878 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 WNT7BP56706 349 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 GNG11P61952 73 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 ARID5AQ03989 594 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 BIRC3Q13489 604 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 HIC1Q14526 733 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 KIZQ2M2Z5 673 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 NBPF20Q3BBV1 942 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 ZACNQ401N2 412 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 SEZ6Q53EL9 994 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 WDR44Q5JSH3 913 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 C10orf76Q5T2E6 689 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 LMBRD2Q68DH5 695 aaPredicted RBP9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 SYT10Q6XYQ8 523 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 RUFY4Q6ZNE9 571 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 APBB1IPQ7Z5R6 666 aaPredicted RBP9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 VPS36Q86VN1 386 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 WDR49Q8IV35 697 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 SPNS2Q8IVW8 549 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 ARHGEF19Q8IW93 802 aa9.43□□□□□ -0.9
CNTNAP3B-213ENST00000617848 KLHDC9Q8NEP7 349 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms