RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 CCT7Q99832 543 aa19.9■□□□□ 0.78
SPAST-203ENST00000615843 CAPN6Q9Y6Q1 641 aa19.9■□□□□ 0.78
SPAST-203ENST00000615843 ENO3P13929 434 aaPredicted RBP19.89■□□□□ 0.78
SPAST-203ENST00000615843 CPA2P48052 419 aa19.89■□□□□ 0.78
SPAST-203ENST00000615843 DSG1Q02413 1049 aa19.89■□□□□ 0.78
SPAST-203ENST00000615843 CYFIP1Q7L576 1253 aa19.89■□□□□ 0.78
SPAST-203ENST00000615843 GALNT4Q8N4A0 578 aa19.89■□□□□ 0.78
SPAST-203ENST00000615843 PPEF1O14829 653 aaPredicted RBP19.89■□□□□ 0.77
SPAST-203ENST00000615843 NMT1P30419 496 aaKnown RBP19.89■□□□□ 0.77
SPAST-203ENST00000615843 EIF2AK1Q9BQI3 630 aaKnown RBP19.89■□□□□ 0.77
SPAST-203ENST00000615843 MANSC1Q9H8J5 431 aa19.89■□□□□ 0.77
SPAST-203ENST00000615843 ALG6Q9Y672 507 aa19.89■□□□□ 0.77
SPAST-203ENST00000615843 EFCAB6Q5THR3 1501 aa19.89■□□□□ 0.77
SPAST-203ENST00000615843 COMTP21964 271 aa19.89■□□□□ 0.77
SPAST-203ENST00000615843 FMO5P49326 533 aa19.89■□□□□ 0.77
SPAST-203ENST00000615843 C1orf228Q6PIY5 440 aa19.89■□□□□ 0.77
SPAST-203ENST00000615843 KRT27Q7Z3Y8 459 aa19.89■□□□□ 0.77
SPAST-203ENST00000615843 CPSF3Q9UKF6 684 aaKnown RBP19.89■□□□□ 0.77
SPAST-203ENST00000615843 WDR17Q8IZU2 1322 aa19.89■□□□□ 0.77
SPAST-203ENST00000615843 PSMD7P51665 324 aa19.89■□□□□ 0.77
SPAST-203ENST00000615843 TAP1Q03518 808 aa19.89■□□□□ 0.77
SPAST-203ENST00000615843 INPP5AQ14642 412 aa19.89■□□□□ 0.77
SPAST-203ENST00000615843 EZH2Q15910 746 aaKnown RBP19.89■□□□□ 0.77
SPAST-203ENST00000615843 RABL6Q3YEC7 729 aaPredicted RBP19.89■□□□□ 0.77
SPAST-203ENST00000615843 ZCWPW2Q504Y3 356 aa19.89■□□□□ 0.77
SPAST-203ENST00000615843 TMEM179Q6ZVK1 233 aa19.89■□□□□ 0.77
SPAST-203ENST00000615843 SLC30A5Q8TAD4 765 aa19.89■□□□□ 0.77
SPAST-203ENST00000615843 OSBPL8Q9BZF1 889 aa19.89■□□□□ 0.77
SPAST-203ENST00000615843 CSADQ9Y600 493 aa19.89■□□□□ 0.77
SPAST-203ENST00000615843 MAP3K4Q9Y6R4 1608 aa19.89■□□□□ 0.77
SPAST-203ENST00000615843 SYF2O95926 243 aaKnown RBP19.89■□□□□ 0.77
SPAST-203ENST00000615843 FOXD4Q12950 439 aaPredicted RBP19.89■□□□□ 0.77
SPAST-203ENST00000615843 KLF6Q99612 283 aaPredicted RBP19.89■□□□□ 0.77
SPAST-203ENST00000615843 FAM129AQ9BZQ8 928 aa19.89■□□□□ 0.77
SPAST-203ENST00000615843 HAO1Q9UJM8 370 aa19.89■□□□□ 0.77
SPAST-203ENST00000615843 CDH6P55285 790 aa19.88■□□□□ 0.77
SPAST-203ENST00000615843 ZNF200P98182 395 aaPredicted RBP19.88■□□□□ 0.77
SPAST-203ENST00000615843 FOXR1Q6PIV2 292 aa19.88■□□□□ 0.77
SPAST-203ENST00000615843 PRPF39Q86UA1 669 aaKnown RBP19.88■□□□□ 0.77
SPAST-203ENST00000615843 OR6B3Q8NGW1 331 aa19.88■□□□□ 0.77
SPAST-203ENST00000615843 CMTM5Q96DZ9 223 aa19.88■□□□□ 0.77
SPAST-203ENST00000615843 ADNPQ9H2P0 1102 aa19.88■□□□□ 0.77
SPAST-203ENST00000615843 SLC12A6Q9UHW9 1150 aa19.88■□□□□ 0.77
SPAST-203ENST00000615843 ANKARQ7Z5J8 1434 aa19.88■□□□□ 0.77
SPAST-203ENST00000615843 EYA4O95677 639 aa19.88■□□□□ 0.77
SPAST-203ENST00000615843 ESRRBO95718 433 aa19.88■□□□□ 0.77
SPAST-203ENST00000615843 PTK7Q13308 1070 aa19.88■□□□□ 0.77
SPAST-203ENST00000615843 EDRF1Q3B7T1 1238 aa19.88■□□□□ 0.77
SPAST-203ENST00000615843 C16orf89Q6UX73 402 aa19.88■□□□□ 0.77
SPAST-203ENST00000615843 SYNE4Q8N205 404 aa19.88■□□□□ 0.77
SPAST-203ENST00000615843 CAVIN3Q969G5 261 aa19.88■□□□□ 0.77
SPAST-203ENST00000615843 COPB2P35606 906 aa19.88■□□□□ 0.77
SPAST-203ENST00000615843 MTMR1Q13613 665 aa19.88■□□□□ 0.77
SPAST-203ENST00000615843 CAPRIN1Q14444 709 aaKnown RBP19.88■□□□□ 0.77
SPAST-203ENST00000615843 FASTKD1Q53R41 847 aaKnown RBP19.88■□□□□ 0.77
SPAST-203ENST00000615843 TRIM65Q6PJ69 517 aa19.88■□□□□ 0.77
SPAST-203ENST00000615843 EPS8L3Q8TE67 593 aaKnown RBP19.88■□□□□ 0.77
SPAST-203ENST00000615843 TMA16Q96EY4 203 aaKnown RBP19.88■□□□□ 0.77
SPAST-203ENST00000615843 SATB2Q9UPW6 733 aa19.88■□□□□ 0.77
SPAST-203ENST00000615843 SNUPNO95149 360 aaKnown RBP19.88■□□□□ 0.77
SPAST-203ENST00000615843 PPP1R36Q96LQ0 422 aa19.88■□□□□ 0.77
SPAST-203ENST00000615843 PAPOLBQ9NRJ5 636 aaKnown RBP19.88■□□□□ 0.77
SPAST-203ENST00000615843 PHTF1Q9UMS5 762 aa19.88■□□□□ 0.77
SPAST-203ENST00000615843 H0Y626 953 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 TRIM16O95361 564 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 COILP38432 576 aaPredicted RBP19.87■□□□□ 0.77
SPAST-203ENST00000615843 PTPAQ15257 358 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 RWDD4Q6NW29 188 aaKnown RBP19.87■□□□□ 0.77
SPAST-203ENST00000615843 CARD9Q9H257 536 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 UTYO14607 1347 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 M0QYV0 167 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 AKAP10O43572 662 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 BBOX1O75936 387 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 P4HBP07237 508 aaKnown RBP19.87■□□□□ 0.77
SPAST-203ENST00000615843 CD44P16070 742 aaKnown RBP19.87■□□□□ 0.77
SPAST-203ENST00000615843 LAMB3Q13751 1172 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 FOXP4Q8IVH2 680 aaPredicted RBP19.87■□□□□ 0.77
SPAST-203ENST00000615843 NEMP1O14524 444 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 XPO1O14980 1071 aaKnown RBP19.87■□□□□ 0.77
SPAST-203ENST00000615843 ATP6V1B1P15313 513 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 NPR1P16066 1061 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 HSPA2P54652 639 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 HERVK_113P62684 666 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 ADGRF4Q8IZF3 695 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 TPCN2Q8NHX9 752 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 LXNQ9BS40 222 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 O00370 1275 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 NSUN2Q08J23 767 aaKnown RBP eCLIP19.87■□□□□ 0.77
SPAST-203ENST00000615843 ATXN7L3BQ96GX2 97 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 RMDN2Q96LZ7 410 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 NLRP4Q96MN2 994 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 FSD1LQ9BXM9 530 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 HPS5Q9UPZ3 1129 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 BCS1LQ9Y276 419 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 ZHX2Q9Y6X8 837 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 NLRP1Q9C000 1473 aa19.87■□□□□ 0.77
SPAST-203ENST00000615843 E7ENQ6 273 aa19.86■□□□□ 0.77
SPAST-203ENST00000615843 FAM47CQ5HY64 1035 aa19.86■□□□□ 0.77
SPAST-203ENST00000615843 SLC27A3Q5K4L6 730 aa19.86■□□□□ 0.77
SPAST-203ENST00000615843 TMEM117Q9H0C3 514 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms