RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 C3orf20Q8ND61 904 aa10.71□□□□□ -0.7
GGA3-221ENST00000614198 C1orf131Q8NDD1 294 aaKnown RBP10.71□□□□□ -0.7
GGA3-221ENST00000614198 SCFD2Q8WU76 684 aa10.71□□□□□ -0.7
GGA3-221ENST00000614198 LRRC1Q9BTT6 524 aa10.71□□□□□ -0.7
GGA3-221ENST00000614198 TBX20Q9UMR3 447 aa10.71□□□□□ -0.7
GGA3-221ENST00000614198 STK24Q9Y6E0 443 aa10.71□□□□□ -0.7
GGA3-221ENST00000614198 MYADML2A6NDP7 307 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 MANSC4A6NHS7 340 aaPredicted RBP10.7□□□□□ -0.7
GGA3-221ENST00000614198 PDXKO00764 312 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 TNPO2O14787 897 aaKnown RBP10.7□□□□□ -0.7
GGA3-221ENST00000614198 VTNP04004 478 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 ADRB2P07550 413 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 RPSAP08865 295 aaKnown RBP10.7□□□□□ -0.7
GGA3-221ENST00000614198 FGFR4P22455 802 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 SEC24CP53992 1094 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 KRT83P78385 493 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 KIF5AQ12840 1032 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 DMP1Q13316 513 aaPredicted RBP10.7□□□□□ -0.7
GGA3-221ENST00000614198 MAN2A1Q16706 1144 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 MORN1Q5T089 497 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 AP1ARQ63HQ0 302 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 IQCKQ8N0W5 287 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 OR8K1Q8NGG5 319 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 RSRC1Q96IZ7 334 aaKnown RBP10.7□□□□□ -0.7
GGA3-221ENST00000614198 NLRP4Q96MN2 994 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 MINDY3Q9H8M7 445 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 SLC45A1Q9Y2W3 748 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 ASB14A6NK59 587 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 E7EVH7 732 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 B4GALT5O43286 388 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 LGALS2P05162 132 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 TGFB3P10600 412 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 INSRRP14616 1297 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 ELNP15502 786 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 NR1D1P20393 614 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 CNGA1P29973 690 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 GCKP35557 465 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 ACOT2P49753 483 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 SPAG1Q07617 926 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 CAPSQ13938 189 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 BMT2Q1RMZ1 405 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 CFAP58Q5T655 872 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 SLC35C1Q96A29 364 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 DHX33Q9H6R0 707 aaKnown RBP10.7□□□□□ -0.7
GGA3-221ENST00000614198 ANKFY1Q9P2R3 1169 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 ARMCX3Q9UH62 379 aaPredicted RBP10.7□□□□□ -0.7
GGA3-221ENST00000614198 GJD2Q9UKL4 321 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 DUSP10Q9Y6W6 482 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 TRIP12Q14669 1992 aaPredicted RBP10.7□□□□□ -0.7
GGA3-221ENST00000614198 DNM1LO00429 736 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 STRNO43815 780 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 MGRN1O60291 552 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 DGAT1O75907 488 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 CALCAP01258 141 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 KRT14P02533 472 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 PAFAH1B1P43034 410 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 PSMC4P43686 418 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 DNM2P50570 870 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 OSTNP61366 133 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 XRCC4Q13426 336 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 TARBP2Q15633 366 aaKnown RBP10.7□□□□□ -0.7
GGA3-221ENST00000614198 ZBTB33Q86T24 672 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 CREG2Q8IUH2 290 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 CD302Q8IX05 232 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 FAM186BQ8IYM0 893 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 MORC4Q8TE76 937 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 SLC7A3Q8WY07 619 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 CYFIP2Q96F07 1278 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 TARS2Q9BW92 718 aaKnown RBP10.7□□□□□ -0.7
GGA3-221ENST00000614198 LSM14BQ9BX40 385 aaKnown RBP10.7□□□□□ -0.7
GGA3-221ENST00000614198 TTYH3Q9C0H2 523 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 HAUS2Q9NVX0 235 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 ETAA1Q9NY74 926 aa10.7□□□□□ -0.7
GGA3-221ENST00000614198 ESYT3A0FGR9 886 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 CALUO43852 315 aaPredicted RBP10.69□□□□□ -0.7
GGA3-221ENST00000614198 MAPTP10636 758 aaKnown RBP10.69□□□□□ -0.7
GGA3-221ENST00000614198 CYLC1P35663 651 aaPredicted RBP10.69□□□□□ -0.7
GGA3-221ENST00000614198 GCLMP48507 274 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 NCKAP1LP55160 1127 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 POLR2FP61218 127 aaKnown RBP10.69□□□□□ -0.7
GGA3-221ENST00000614198 HLTFQ14527 1009 aaKnown RBP eCLIP10.69□□□□□ -0.73e-6■■□□□ 13
GGA3-221ENST00000614198 ANKRD20A8PQ5CZ79 823 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 CDCA2Q69YH5 1023 aaPredicted RBP10.69□□□□□ -0.7
GGA3-221ENST00000614198 RRAGAQ7L523 313 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 SMC1BQ8NDV3 1235 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 TRPV1Q8NER1 839 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 BICD1Q96G01 975 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 BORCS6Q96GS4 357 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 C16orf70Q9BSU1 422 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 OSBPL7Q9BZF2 842 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 SETD4Q9NVD3 440 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 HSPBP1Q9NZL4 362 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 EHD2Q9NZN4 543 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 CPSF2Q9P2I0 782 aaKnown RBP10.69□□□□□ -0.7
GGA3-221ENST00000614198 EYSQ5T1H1 3165 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 GOLGA6L10A6NI86 522 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 ZNF233A6NK53 670 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 LRRC53A6NM62 1247 aa10.69□□□□□ -0.7
GGA3-221ENST00000614198 HNRNPDLO14979 420 aaKnown RBP10.69□□□□□ -0.7
GGA3-221ENST00000614198 MUTP22033 750 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms