RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 SP4Q02446 784 aa13.56□□□□□ -0.24
PCDHGA4-202ENST00000612927 MYO1EQ12965 1108 aa13.56□□□□□ -0.24
PCDHGA4-202ENST00000612927 MYBPC2Q14324 1141 aa13.56□□□□□ -0.24
PCDHGA4-202ENST00000612927 SH3D19Q5HYK7 790 aa13.56□□□□□ -0.24
PCDHGA4-202ENST00000612927 SPDYCQ5MJ68 293 aa13.56□□□□□ -0.24
PCDHGA4-202ENST00000612927 ERMARDQ5T6L9 678 aa13.56□□□□□ -0.24
PCDHGA4-202ENST00000612927 OR2W6PQ8NHA6 318 aa13.56□□□□□ -0.24
PCDHGA4-202ENST00000612927 LMBR1Q8WVP7 490 aa13.56□□□□□ -0.24
PCDHGA4-202ENST00000612927 KAT5Q92993 513 aa13.56□□□□□ -0.24
PCDHGA4-202ENST00000612927 TBC1D31Q96DN5 1066 aa13.56□□□□□ -0.24
PCDHGA4-202ENST00000612927 STAMBPL1Q96FJ0 436 aa13.56□□□□□ -0.24
PCDHGA4-202ENST00000612927 TIPINQ9BVW5 301 aa13.56□□□□□ -0.24
PCDHGA4-202ENST00000612927 FAM129AQ9BZQ8 928 aa13.56□□□□□ -0.24
PCDHGA4-202ENST00000612927 DDX47Q9H0S4 455 aaKnown RBP13.56□□□□□ -0.24
PCDHGA4-202ENST00000612927 HSPBP1Q9NZL4 362 aa13.56□□□□□ -0.24
PCDHGA4-202ENST00000612927 NOVA2Q9UNW9 492 aaKnown RBP13.56□□□□□ -0.24
PCDHGA4-202ENST00000612927 TRPC6Q9Y210 931 aa13.56□□□□□ -0.24
PCDHGA4-202ENST00000612927 POLR2AP24928 1970 aaKnown RBP13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 DICER1Q9UPY3 1922 aaKnown RBP13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 ADM5C9JUS6 153 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 ATP2C2O75185 946 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 STBD1O95210 358 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 ITGA4P13612 1032 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 VAMP7P51809 220 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 SOX10P56693 466 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 C1orf220Q5T0J3 134 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 BZW1Q7L1Q6 419 aaKnown RBP13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 SLFN11Q7Z7L1 901 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 NT5DC3Q86UY8 548 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 SLC35G2Q8TBE7 412 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 XPO6Q96QU8 1125 aaKnown RBP13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 ST6GALNAC4Q9H4F1 302 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 UBE2TQ9NPD8 197 aaPredicted RBP13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 HOXC10Q9NYD6 342 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 STXBP5LQ9Y2K9 1186 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 LCTP09848 1927 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 KIAA1217Q5T5P2 1943 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 A0A0A6YYK5 440 aaPredicted RBP13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 PGRMC1O00264 195 aaKnown RBP13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 MAFGO15525 162 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 ADRB2P07550 413 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 SSR1P43307 286 aaKnown RBP13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 EIF3BP55884 814 aaKnown RBP13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 C12orf56Q8IXR9 622 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 BSNDQ8WZ55 320 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 SPDL1Q96EA4 605 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 PBKQ96KB5 322 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 THAP2Q9H0W7 228 aa13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 NOP53Q9NZM5 478 aaKnown RBP13.55□□□□□ -0.24
PCDHGA4-202ENST00000612927 DOCK5Q9H7D0 1870 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 LOC285556D6RIA3 1793 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 MYPNQ86TC9 1320 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 ALADP13716 330 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 MAGOHP61326 146 aaKnown RBP13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 FSTL1Q12841 308 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 SWSAP1Q6NVH7 229 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 INTS8Q75QN2 995 aaKnown RBP13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 ACTRT1Q8TDG2 376 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 SCFD2Q8WU76 684 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 UBLCP1Q8WVY7 318 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 CTNNBL1Q8WYA6 563 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 RFFLQ8WZ73 363 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 MAGOHBQ96A72 148 aaKnown RBP13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 ELMO3Q96BJ8 720 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 TLCD1Q96CP7 247 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 L3MBTL3Q96JM7 780 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 JPH1Q9HDC5 661 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 INTUQ9ULD6 942 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 NCANO14594 1321 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 ANKRD33BA6NCL7 494 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 ANP32DO95626 131 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 TNFAIP3P21580 790 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 NPTX2P47972 431 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 ADCY2Q08462 1091 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 BIRC2Q13490 618 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 ZNF268Q14587 947 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 DDX42Q86XP3 938 aaKnown RBP eCLIP13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 CCDC60Q8IWA6 550 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 XXYLT1Q8NBI6 393 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 SAAL1Q96ER3 474 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 CEP170P1Q96L14 293 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 ACP6Q9NPH0 428 aa13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 CHORDC1Q9UHD1 332 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA4-202ENST00000612927 NFASCO94856 1347 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 CCDC169A6NNP5 214 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 SPATA31C2B4DYI2 1134 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 ANKRD63C9JTQ0 380 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 TMEM253P0C7T8 217 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 ACTR2P61160 394 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 CNTN2Q02246 1040 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 CBWD2Q8IUF1 395 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 KIRREL3Q8IZU9 778 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 TMEM161BQ8NDZ6 487 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 TMEM174Q8WUU8 243 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 ZNF317Q96PQ6 595 aaPredicted RBP13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 SUCLA2Q9P2R7 463 aaPredicted RBP13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 SLC9A2Q9UBY0 812 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 COG5Q9UP83 839 aa13.53□□□□□ -0.24
PCDHGA4-202ENST00000612927 ATP8B3O60423 1300 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms