RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 BRAPQ7Z569 592 aa19.05■□□□□ 0.64
PRKN-209ENST00000612485 FBXL6Q8N531 539 aa19.05■□□□□ 0.64
PRKN-209ENST00000612485 FEZF2Q8TBJ5 459 aa19.05■□□□□ 0.64
PRKN-209ENST00000612485 SPIRE2Q8WWL2 714 aa19.05■□□□□ 0.64
PRKN-209ENST00000612485 ASIC4Q96FT7 647 aa19.05■□□□□ 0.64
PRKN-209ENST00000612485 UROC1Q96N76 676 aa19.05■□□□□ 0.64
PRKN-209ENST00000612485 PLIN2Q99541 437 aa19.05■□□□□ 0.64
PRKN-209ENST00000612485 NTPCRQ9BSD7 190 aaKnown RBP19.05■□□□□ 0.64
PRKN-209ENST00000612485 CDT1Q9H211 546 aa19.05■□□□□ 0.64
PRKN-209ENST00000612485 CXCL16Q9H2A7 254 aa19.05■□□□□ 0.64
PRKN-209ENST00000612485 PTPRHQ9HD43 1115 aa19.05■□□□□ 0.64
PRKN-209ENST00000612485 LIMD1Q9UGP4 676 aa19.05■□□□□ 0.64
PRKN-209ENST00000612485 SFI1A8K8P3 1242 aa19.04■□□□□ 0.64
PRKN-209ENST00000612485 SLC16A4O15374 487 aa19.04■□□□□ 0.64
PRKN-209ENST00000612485 MCF2P10911 925 aa19.04■□□□□ 0.64
PRKN-209ENST00000612485 PLS3P13797 630 aa19.04■□□□□ 0.64
PRKN-209ENST00000612485 SLC12A3P55017 1021 aa19.04■□□□□ 0.64
PRKN-209ENST00000612485 STRN3Q13033 797 aa19.04■□□□□ 0.64
PRKN-209ENST00000612485 TMEM119Q4V9L6 283 aa19.04■□□□□ 0.64
PRKN-209ENST00000612485 GLRA4Q5JXX5 417 aa19.04■□□□□ 0.64
PRKN-209ENST00000612485 TAS1R3Q7RTX0 852 aa19.04■□□□□ 0.64
PRKN-209ENST00000612485 CEP57Q86XR8 500 aa19.04■□□□□ 0.64
PRKN-209ENST00000612485 GLYCTKQ8IVS8 523 aa19.04■□□□□ 0.64
PRKN-209ENST00000612485 PIK3R5Q8WYR1 880 aa19.04■□□□□ 0.64
PRKN-209ENST00000612485 STAMQ92783 540 aa19.04■□□□□ 0.64
PRKN-209ENST00000612485 CALML4Q96GE6 196 aa19.04■□□□□ 0.64
PRKN-209ENST00000612485 PPP1R10Q96QC0 940 aaKnown RBP19.04■□□□□ 0.64
PRKN-209ENST00000612485 TCHPQ9BT92 498 aa19.04■□□□□ 0.64
PRKN-209ENST00000612485 TARS2Q9BW92 718 aaKnown RBP19.04■□□□□ 0.64
PRKN-209ENST00000612485 ZDHHC7Q9NXF8 308 aa19.04■□□□□ 0.64
PRKN-209ENST00000612485 GTF3C3Q9Y5Q9 886 aa19.04■□□□□ 0.64
PRKN-209ENST00000612485 PLXNA3P51805 1871 aa19.03■□□□□ 0.64
PRKN-209ENST00000612485 DENND4AQ7Z401 1863 aa19.03■□□□□ 0.64
PRKN-209ENST00000612485 TMEM189-UBE2V1I3L0A0 370 aa19.03■□□□□ 0.64
PRKN-209ENST00000612485 RFPL2O75678 378 aa19.03■□□□□ 0.64
PRKN-209ENST00000612485 ASGR2P07307 311 aa19.03■□□□□ 0.64
PRKN-209ENST00000612485 SPATA31D3P0C874 917 aa19.03■□□□□ 0.64
PRKN-209ENST00000612485 MYBP10242 640 aa19.03■□□□□ 0.64
PRKN-209ENST00000612485 RPL17P18621 184 aaKnown RBP19.03■□□□□ 0.64
PRKN-209ENST00000612485 UBA7P41226 1012 aa19.03■□□□□ 0.64
PRKN-209ENST00000612485 RAD51AP2Q09MP3 1159 aa19.03■□□□□ 0.64
PRKN-209ENST00000612485 CUL4AQ13619 759 aa19.03■□□□□ 0.64
PRKN-209ENST00000612485 PSMD5Q16401 504 aa19.03■□□□□ 0.64
PRKN-209ENST00000612485 LILRA6Q6PI73 481 aa19.03■□□□□ 0.64
PRKN-209ENST00000612485 DCLRE1AQ6PJP8 1040 aa19.03■□□□□ 0.64
PRKN-209ENST00000612485 PRSS55Q6UWB4 352 aaPredicted RBP19.03■□□□□ 0.64
PRKN-209ENST00000612485 MPZL3Q6UWV2 235 aa19.03■□□□□ 0.64
PRKN-209ENST00000612485 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.03■□□□□ 0.64
PRKN-209ENST00000612485 SPATA31D4Q6ZUB0 917 aa19.03■□□□□ 0.64
PRKN-209ENST00000612485 CEP120Q8N960 986 aa19.03■□□□□ 0.64
PRKN-209ENST00000612485 SMG7Q92540 1137 aaKnown RBP19.03■□□□□ 0.64
PRKN-209ENST00000612485 WDR6Q9NNW5 1121 aaKnown RBP19.03■□□□□ 0.64
PRKN-209ENST00000612485 SLC38A7Q9NVC3 462 aa19.03■□□□□ 0.64
PRKN-209ENST00000612485 SMIM28A0A1B0GU29 152 aa19.02■□□□□ 0.64
PRKN-209ENST00000612485 H0YCG3 227 aa19.02■□□□□ 0.64
PRKN-209ENST00000612485 B3GAT3O94766 335 aa19.02■□□□□ 0.64
PRKN-209ENST00000612485 PAPLNO95428 1278 aa19.02■□□□□ 0.64
PRKN-209ENST00000612485 BRD1O95696 1058 aa19.02■□□□□ 0.64
PRKN-209ENST00000612485 PDCP20941 246 aa19.02■□□□□ 0.64
PRKN-209ENST00000612485 PROZP22891 400 aa19.02■□□□□ 0.64
PRKN-209ENST00000612485 CLCNKBP51801 687 aa19.02■□□□□ 0.64
PRKN-209ENST00000612485 OSTNP61366 133 aa19.02■□□□□ 0.64
PRKN-209ENST00000612485 XKR4Q5GH76 650 aa19.02■□□□□ 0.64
PRKN-209ENST00000612485 TMEM161BQ8NDZ6 487 aa19.02■□□□□ 0.64
PRKN-209ENST00000612485 LNX1Q8TBB1 728 aaPredicted RBP19.02■□□□□ 0.64
PRKN-209ENST00000612485 ACAP3Q96P50 834 aa19.02■□□□□ 0.64
PRKN-209ENST00000612485 PRRX2Q99811 253 aa19.02■□□□□ 0.64
PRKN-209ENST00000612485 PIDD1Q9HB75 910 aa19.02■□□□□ 0.64
PRKN-209ENST00000612485 LARSQ9P2J5 1176 aaKnown RBP19.02■□□□□ 0.64
PRKN-209ENST00000612485 MUC6Q6W4X9 2439 aa19.02■□□□□ 0.63
PRKN-209ENST00000612485 ZNF318Q5VUA4 2279 aa19.02■□□□□ 0.63
PRKN-209ENST00000612485 CLUHO75153 1309 aa19.01■□□□□ 0.63
PRKN-209ENST00000612485 VPS37CA5D8V6 355 aaPredicted RBP19.01■□□□□ 0.63
PRKN-209ENST00000612485 TRAPPC3O43617 180 aa19.01■□□□□ 0.63
PRKN-209ENST00000612485 TOM1L1O75674 476 aa19.01■□□□□ 0.63
PRKN-209ENST00000612485 LONP1P36776 959 aaKnown RBP19.01■□□□□ 0.63
PRKN-209ENST00000612485 UPP1Q16831 310 aa19.01■□□□□ 0.63
PRKN-209ENST00000612485 ALKAL1Q6UXT8 129 aa19.01■□□□□ 0.63
PRKN-209ENST00000612485 ZNF707Q96C28 371 aaPredicted RBP19.01■□□□□ 0.63
PRKN-209ENST00000612485 DDX27Q96GQ7 796 aaKnown RBP19.01■□□□□ 0.63
PRKN-209ENST00000612485 CLSTN3Q9BQT9 956 aa19.01■□□□□ 0.63
PRKN-209ENST00000612485 PRKD2Q9BZL6 878 aa19.01■□□□□ 0.63
PRKN-209ENST00000612485 C2orf16Q68DN1 1984 aa19.01■□□□□ 0.63
PRKN-209ENST00000612485 ABLIM1O14639 778 aa19■□□□□ 0.63
PRKN-209ENST00000612485 ZMYND10O75800 440 aa19■□□□□ 0.63
PRKN-209ENST00000612485 MAPTP10636 758 aaKnown RBP19■□□□□ 0.63
PRKN-209ENST00000612485 HARSP12081 509 aaKnown RBP19■□□□□ 0.63
PRKN-209ENST00000612485 FGFR3P22607 806 aa19■□□□□ 0.63
PRKN-209ENST00000612485 HOXD11P31277 338 aaPredicted RBP19■□□□□ 0.63
PRKN-209ENST00000612485 GBP2P32456 591 aaPredicted RBP19■□□□□ 0.63
PRKN-209ENST00000612485 NOLC1Q14978 699 aaKnown RBP eCLIP19■□□□□ 0.63
PRKN-209ENST00000612485 SF3A1Q15459 793 aaKnown RBP19■□□□□ 0.63
PRKN-209ENST00000612485 LIN9Q5TKA1 542 aa19■□□□□ 0.63
PRKN-209ENST00000612485 ZPBP2Q6X784 338 aa19■□□□□ 0.63
PRKN-209ENST00000612485 RASSF8Q8NHQ8 419 aa19■□□□□ 0.63
PRKN-209ENST00000612485 SNX27Q96L92 541 aa19■□□□□ 0.63
PRKN-209ENST00000612485 ANKFY1Q9P2R3 1169 aa19■□□□□ 0.63
PRKN-209ENST00000612485 FBXW11Q9UKB1 542 aa19■□□□□ 0.63
PRKN-209ENST00000612485 ODF2LQ9ULJ1 636 aa19■□□□□ 0.63
PRKN-209ENST00000612485 MYO10Q9HD67 2058 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms