RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	RESP18	Q5W5W9	173 aa		18.28	■□□□□ 0.52
CCND3-222	ENST00000612455	CNNM4	Q6P4Q7	775 aa		18.28	■□□□□ 0.52
CCND3-222	ENST00000612455	SFR1	Q86XK3	245 aa		18.28	■□□□□ 0.52
CCND3-222	ENST00000612455	MAP4K3	Q8IVH8	894 aa		18.28	■□□□□ 0.52
CCND3-222	ENST00000612455	IQUB	Q8NA54	791 aa		18.28	■□□□□ 0.52
CCND3-222	ENST00000612455	AUTS2	Q8WXX7	1259 aa		18.28	■□□□□ 0.52
CCND3-222	ENST00000612455	UHRF1	Q96T88	793 aa	Predicted RBP	18.28	■□□□□ 0.52
CCND3-222	ENST00000612455	GPR62	Q9BZJ7	368 aa		18.28	■□□□□ 0.52
CCND3-222	ENST00000612455	TNMD	Q9H2S6	317 aa		18.28	■□□□□ 0.52
CCND3-222	ENST00000612455	ZHX3	Q9H4I2	956 aa		18.28	■□□□□ 0.52
CCND3-222	ENST00000612455	TOPORS	Q9NS56	1045 aa	Predicted RBP	18.28	■□□□□ 0.52
CCND3-222	ENST00000612455	CD207	Q9UJ71	328 aa		18.28	■□□□□ 0.52
CCND3-222	ENST00000612455	ADAM28	Q9UKQ2	775 aa		18.28	■□□□□ 0.52
CCND3-222	ENST00000612455	MBTPS2	O43462	519 aa		18.27	■□□□□ 0.52
CCND3-222	ENST00000612455	IL9	P15248	144 aa		18.27	■□□□□ 0.52
CCND3-222	ENST00000612455	ME1	P48163	572 aa		18.27	■□□□□ 0.52
CCND3-222	ENST00000612455	NDUFV1	P49821	464 aa		18.27	■□□□□ 0.52
CCND3-222	ENST00000612455	OSTN	P61366	133 aa		18.27	■□□□□ 0.52
CCND3-222	ENST00000612455	HSP90AA2P	Q14568	343 aa	Predicted RBP	18.27	■□□□□ 0.52
CCND3-222	ENST00000612455	SLC10A6	Q3KNW5	377 aa		18.27	■□□□□ 0.52
CCND3-222	ENST00000612455	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	18.27	■□□□□ 0.52
CCND3-222	ENST00000612455	SLC39A4	Q6P5W5	647 aa		18.27	■□□□□ 0.52
CCND3-222	ENST00000612455	SLC22A17	Q8WUG5	538 aa		18.27	■□□□□ 0.52
CCND3-222	ENST00000612455	HVCN1	Q96D96	273 aa		18.27	■□□□□ 0.52
CCND3-222	ENST00000612455	SNX27	Q96L92	541 aa		18.27	■□□□□ 0.52
CCND3-222	ENST00000612455	ZMAT2	Q96NC0	199 aa	Known RBP	18.27	■□□□□ 0.52
CCND3-222	ENST00000612455	LRRC27	Q9C0I9	530 aa		18.27	■□□□□ 0.52
CCND3-222	ENST00000612455	OLFML3	Q9NRN5	406 aa		18.27	■□□□□ 0.52
CCND3-222	ENST00000612455	CNTN3	Q9P232	1028 aa		18.27	■□□□□ 0.52
CCND3-222	ENST00000612455	CACNG4	Q9UBN1	327 aa		18.27	■□□□□ 0.52
CCND3-222	ENST00000612455	BARX2	Q9UMQ3	279 aa	Predicted RBP	18.27	■□□□□ 0.52
CCND3-222	ENST00000612455	SSX2IP	Q9Y2D8	614 aa		18.27	■□□□□ 0.52
CCND3-222	ENST00000612455	STYXL1	Q9Y6J8	313 aa		18.27	■□□□□ 0.52
CCND3-222	ENST00000612455	BDP1	A6H8Y1	2624 aa		18.26	■□□□□ 0.51
CCND3-222	ENST00000612455		A0A0B4J269	797 aa		18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	FAM189A1	O60320	539 aa		18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	ADRB2	P07550	413 aa		18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	LIG4	P49917	911 aa		18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	DSG1	Q02413	1049 aa		18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	SMAD4	Q13485	552 aa	Known RBP	18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	SMAD2	Q15796	467 aa	Known RBP	18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	FUT10	Q6P4F1	479 aa		18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	CD300LG	Q6UXG3	332 aa		18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	SMRP1	Q8NCR6	262 aa		18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	LEO1	Q8WVC0	666 aa	Predicted RBP	18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	RABGGTA	Q92696	567 aa		18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	KLHL5	Q96PQ7	755 aa		18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	S1PR5	Q9H228	398 aa		18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	PLEKHA5	Q9HAU0	1116 aa		18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	RXFP1	Q9HBX9	757 aa		18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	MRPL17	Q9NRX2	175 aa	Known RBP	18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	ANKFY1	Q9P2R3	1169 aa		18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	FAM50B	Q9Y247	325 aa		18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	HCFC2	Q9Y5Z7	792 aa		18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	PDCD11	Q14690	1871 aa	Known RBP	18.26	■□□□□ 0.51
CCND3-222	ENST00000612455	CASTOR2	A6NHX0	329 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	ANKRD63	C9JTQ0	380 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	TMEM189-UBE2V1	I3L0A0	370 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	TADA2A	O75478	443 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	CLTA	P09496	248 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	CNP	P09543	421 aa	Known RBP	18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	KRT85	P78386	507 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	SOX4	Q06945	474 aa	Predicted RBP	18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	KYAT1	Q16773	422 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	HERC4	Q5GLZ8	1057 aa	Predicted RBP	18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	GLRA4	Q5JXX5	417 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	ADAL	Q6DHV7	355 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	ANKRD54	Q6NXT1	300 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	SYCE2	Q6PIF2	218 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	DCLRE1A	Q6PJP8	1040 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	STAM	Q92783	540 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	CASP10	Q92851	521 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	DHX58	Q96C10	678 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	BICD1	Q96G01	975 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	CHAMP1	Q96JM3	812 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	UROC1	Q96N76	676 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	NECAB3	Q96P71	396 aa	Predicted RBP	18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	TRIM9	Q9C026	710 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	PANK4	Q9NVE7	773 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	FAM13B	Q9NYF5	915 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	ATP6V1D	Q9Y5K8	247 aa		18.25	■□□□□ 0.51
CCND3-222	ENST00000612455	TTC26	A0AVF1	554 aa		18.24	■□□□□ 0.51
CCND3-222	ENST00000612455	HNRNPDL	O14979	420 aa	Known RBP	18.24	■□□□□ 0.51
CCND3-222	ENST00000612455	OGT	O15294	1046 aa		18.24	■□□□□ 0.51
CCND3-222	ENST00000612455	POLR2D	O15514	142 aa	Known RBP	18.24	■□□□□ 0.51
CCND3-222	ENST00000612455	KIF4A	O95239	1232 aa		18.24	■□□□□ 0.51
CCND3-222	ENST00000612455	C1R	P00736	705 aa		18.24	■□□□□ 0.51
CCND3-222	ENST00000612455	IDE	P14735	1019 aa		18.24	■□□□□ 0.51
CCND3-222	ENST00000612455	HOXB8	P17481	243 aa	Predicted RBP	18.24	■□□□□ 0.51
CCND3-222	ENST00000612455	CMA1	P23946	247 aa		18.24	■□□□□ 0.51
CCND3-222	ENST00000612455	IGFBP6	P24592	240 aa	Predicted RBP	18.24	■□□□□ 0.51
CCND3-222	ENST00000612455	GLUD2	P49448	558 aa		18.24	■□□□□ 0.51
CCND3-222	ENST00000612455	AMPD3	Q01432	767 aa		18.24	■□□□□ 0.51
CCND3-222	ENST00000612455	CLUL1	Q15846	466 aa		18.24	■□□□□ 0.51
CCND3-222	ENST00000612455	UPP1	Q16831	310 aa		18.24	■□□□□ 0.51
CCND3-222	ENST00000612455	USP41	Q3LFD5	358 aa		18.24	■□□□□ 0.51
CCND3-222	ENST00000612455	SEZ6	Q53EL9	994 aa		18.24	■□□□□ 0.51
CCND3-222	ENST00000612455	PPFIBP1	Q86W92	1011 aa		18.24	■□□□□ 0.51
CCND3-222	ENST00000612455	DDX27	Q96GQ7	796 aa	Known RBP	18.24	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms