RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 TRAPPC3O43617 180 aa18.46■□□□□ 0.55
NEK3-206ENST00000611833 COILP38432 576 aaPredicted RBP18.46■□□□□ 0.55
NEK3-206ENST00000611833 DEFB132Q7Z7B7 95 aa18.46■□□□□ 0.55
NEK3-206ENST00000611833 ATP6V0A1Q93050 837 aa18.46■□□□□ 0.55
NEK3-206ENST00000611833 CYFIP2Q96F07 1278 aa18.46■□□□□ 0.55
NEK3-206ENST00000611833 RUNDC3BQ96NL0 473 aa18.46■□□□□ 0.55
NEK3-206ENST00000611833 FZD1Q9UP38 647 aa18.46■□□□□ 0.55
NEK3-206ENST00000611833 TLDC2A0PJX2 215 aa18.46■□□□□ 0.55
NEK3-206ENST00000611833 RNF187Q5TA31 235 aaPredicted RBP18.46■□□□□ 0.55
NEK3-206ENST00000611833 SWSAP1Q6NVH7 229 aa18.46■□□□□ 0.55
NEK3-206ENST00000611833 SCYL3Q8IZE3 742 aa18.46■□□□□ 0.55
NEK3-206ENST00000611833 GPD1LQ8N335 351 aa18.46■□□□□ 0.55
NEK3-206ENST00000611833 EPB41L4BQ9H329 900 aa18.46■□□□□ 0.55
NEK3-206ENST00000611833 CNOT10Q9H9A5 744 aaKnown RBP18.46■□□□□ 0.55
NEK3-206ENST00000611833 XPNPEP1Q9NQW7 623 aa18.46■□□□□ 0.55
NEK3-206ENST00000611833 ZNF214Q9UL59 606 aaPredicted RBP18.46■□□□□ 0.55
NEK3-206ENST00000611833 MAFGO15525 162 aa18.45■□□□□ 0.54
NEK3-206ENST00000611833 RARAP10276 462 aa18.45■□□□□ 0.54
NEK3-206ENST00000611833 RPS12P25398 132 aaKnown RBP18.45■□□□□ 0.54
NEK3-206ENST00000611833 GMPSP49915 693 aaPredicted RBP18.45■□□□□ 0.54
NEK3-206ENST00000611833 SP4Q02446 784 aa18.45■□□□□ 0.54
NEK3-206ENST00000611833 SLC29A2Q14542 456 aa18.45■□□□□ 0.54
NEK3-206ENST00000611833 CYP1B1Q16678 543 aa18.45■□□□□ 0.54
NEK3-206ENST00000611833 DALRD3Q5D0E6 543 aaKnown RBP18.45■□□□□ 0.54
NEK3-206ENST00000611833 ZNF280CQ8ND82 737 aa18.45■□□□□ 0.54
NEK3-206ENST00000611833 DDX1Q92499 740 aaKnown RBP18.45■□□□□ 0.54
NEK3-206ENST00000611833 RAPGEF5Q92565 580 aa18.45■□□□□ 0.54
NEK3-206ENST00000611833 RNF25Q96BH1 459 aaPredicted RBP18.45■□□□□ 0.54
NEK3-206ENST00000611833 TLCD1Q96CP7 247 aa18.45■□□□□ 0.54
NEK3-206ENST00000611833 FAM213AQ9BRX8 229 aa18.45■□□□□ 0.54
NEK3-206ENST00000611833 PI4K2AQ9BTU6 479 aa18.45■□□□□ 0.54
NEK3-206ENST00000611833 PLVAPQ9BX97 442 aa18.45■□□□□ 0.54
NEK3-206ENST00000611833 PDLIM7Q9NR12 457 aa18.45■□□□□ 0.54
NEK3-206ENST00000611833 PASKQ96RG2 1323 aa18.45■□□□□ 0.54
NEK3-206ENST00000611833 DKC1O60832 514 aaKnown RBP eCLIP18.45■□□□□ 0.54
NEK3-206ENST00000611833 PTPRAP18433 802 aa18.45■□□□□ 0.54
NEK3-206ENST00000611833 KCNJ1P48048 391 aa18.45■□□□□ 0.54
NEK3-206ENST00000611833 HMGCS2P54868 508 aa18.45■□□□□ 0.54
NEK3-206ENST00000611833 IFT88Q13099 833 aa18.45■□□□□ 0.54
NEK3-206ENST00000611833 BYSLQ13895 437 aaKnown RBP18.45■□□□□ 0.54
NEK3-206ENST00000611833 CCDC60Q8IWA6 550 aaPredicted RBP18.45■□□□□ 0.54
NEK3-206ENST00000611833 NSUN6Q8TEA1 469 aaKnown RBP18.45■□□□□ 0.54
NEK3-206ENST00000611833 FAM84AQ96KN4 292 aa18.45■□□□□ 0.54
NEK3-206ENST00000611833 RGS17Q9UGC6 210 aaPredicted RBP18.45■□□□□ 0.54
NEK3-206ENST00000611833 PHIPQ8WWQ0 1821 aa18.45■□□□□ 0.54
NEK3-206ENST00000611833 SMIM23A6NLE4 172 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 SORBS3O60504 671 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 PSAPP07602 524 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 LLGL1Q15334 1064 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 CLEC16AQ2KHT3 1053 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 PRAMEF18Q5VWM3 479 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 POTEAQ6S8J7 498 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 ENOSF1Q7L5Y1 443 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 TAS1R3Q7RTX0 852 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 C3orf20Q8ND61 904 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 MCPH1Q8NEM0 835 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 IFT74Q96LB3 600 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 SEMA4AQ9H3S1 761 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 SEPT9Q9UHD8 586 aaPredicted RBP18.44■□□□□ 0.54
NEK3-206ENST00000611833 GGA2Q9UJY4 613 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 GRIN3BO60391 1043 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 DGAT1O75907 488 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 CALCAP01258 141 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 PAEPP09466 180 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 MAPK4P31152 587 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 TGFB2P61812 414 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 TMEM132BQ14DG7 1078 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 PPP1R7Q15435 360 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 BRDTQ58F21 947 aaPredicted RBP18.44■□□□□ 0.54
NEK3-206ENST00000611833 YTHDF3Q7Z739 585 aaKnown RBP18.44■□□□□ 0.54
NEK3-206ENST00000611833 SLC16A10Q8TF71 515 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 WRNIP1Q96S55 665 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 JPH1Q9HDC5 661 aaPredicted RBP18.44■□□□□ 0.54
NEK3-206ENST00000611833 C1orf112Q9NSG2 853 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 CNOT7Q9UIV1 285 aaKnown RBP18.44■□□□□ 0.54
NEK3-206ENST00000611833 ANAPC7Q9UJX3 599 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 ADAMTS5Q9UNA0 930 aa18.44■□□□□ 0.54
NEK3-206ENST00000611833 UTRNP46939 3433 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 RGS16O15492 202 aaPredicted RBP18.43■□□□□ 0.54
NEK3-206ENST00000611833 CLDN3O15551 220 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 ECEL1O95672 775 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 GARTP22102 1010 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 DSG3P32926 999 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 FNTAP49354 379 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 PRKCEQ02156 737 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 GCNT1Q02742 428 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 SLMAPQ14BN4 828 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 MDM1Q8TC05 714 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 PGM2Q96G03 612 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 AS3MTQ9HBK9 375 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 ZNF112Q9UJU3 913 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 CAPN7Q9Y6W3 813 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 FGFR4P22455 802 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 OAZ1P54368 228 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 CALCOCO2Q13137 446 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 SIX1Q15475 284 aaPredicted RBP18.43■□□□□ 0.54
NEK3-206ENST00000611833 DCAF15Q66K64 600 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 CYFIP1Q7L576 1253 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 UHMK1Q8TAS1 419 aaKnown RBP18.43■□□□□ 0.54
NEK3-206ENST00000611833 CEP89Q96ST8 783 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms