RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 ANKEF1Q9NU02 776 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 TXNDC16Q9P2K2 825 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 PCDHB2Q9Y5E7 798 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.25□□□□□ -0.93
LIG4-204ENST00000611712 H7C0C1 242 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 ITIH2P19823 946 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 NPTX2P47972 431 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 ATP5OP48047 213 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 HMGCS2P54868 508 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 YWHAGP61981 247 aaKnown RBP eCLIP9.25□□□□□ -0.93
LIG4-204ENST00000611712 BASP1P80723 227 aaKnown RBP9.25□□□□□ -0.93
LIG4-204ENST00000611712 CDR2Q01850 454 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 KRT81Q14533 505 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 STXBP2Q15833 593 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 BMT2Q1RMZ1 405 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 BBS9Q3SYG4 887 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 PHLDB3Q6NSJ2 640 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 TRMT10CQ7L0Y3 403 aaKnown RBP9.25□□□□□ -0.93
LIG4-204ENST00000611712 MREGQ8N565 214 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 ATG4AQ8WYN0 398 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 DHX38Q92620 1227 aaKnown RBP9.25□□□□□ -0.93
LIG4-204ENST00000611712 MOV10L1Q9BXT6 1211 aaKnown RBP9.25□□□□□ -0.93
LIG4-204ENST00000611712 SEMA4AQ9H3S1 761 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 CSADQ9Y600 493 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 PLIN4Q96Q06 1357 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 WDR91A4D1P6 747 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 TCP11X1B4DZS4 312 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 GOLGA8MH3BSY2 632 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 P4HA1P13674 534 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 SLC1A1P43005 524 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 RASSF2P50749 326 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 PPP3CAQ08209 521 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 AADACL2Q6P093 401 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 TATDN1Q6P1N9 297 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 CENPUQ71F23 418 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 EPM2AIP1Q7L775 607 aaPredicted RBP9.25□□□□□ -0.93
LIG4-204ENST00000611712 EPS8L3Q8TE67 593 aaKnown RBP9.25□□□□□ -0.93
LIG4-204ENST00000611712 KRT35Q92764 455 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 MCUR1Q96AQ8 359 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 ANKRD36BP1Q96IX9 119 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 DNAJC18Q9H819 358 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 ACP6Q9NPH0 428 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 ZNF302Q9NR11 478 aa9.25□□□□□ -0.93
LIG4-204ENST00000611712 PIK3CDO00329 1044 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 HLA-DRAP01903 254 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 TBXAS1P24557 533 aaPredicted RBP9.24□□□□□ -0.93
LIG4-204ENST00000611712 HNRNPH1P31943 449 aaKnown RBP9.24□□□□□ -0.93
LIG4-204ENST00000611712 SNRPFP62306 86 aaKnown RBP9.24□□□□□ -0.93
LIG4-204ENST00000611712 GPS1Q13098 491 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 DRP2Q13474 957 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 ACAD10Q6JQN1 1059 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 PYROXD1Q8WU10 500 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 ATG4CQ96DT6 458 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 ZNF668Q96K58 619 aaPredicted RBP9.24□□□□□ -0.93
LIG4-204ENST00000611712 NLRP4Q96MN2 994 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 MRIQ9BWK5 157 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 BCAS3Q9H6U6 928 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 HAUS2Q9NVX0 235 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 MYH3P11055 1940 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 PSMA2P25787 234 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 RXRBP28702 533 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 PCK1P35558 622 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 PRKCEQ02156 737 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 LGSNQ5TDP6 509 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 TRIM72Q6ZMU5 477 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 VPS52Q8N1B4 723 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 EIF1ADQ8N9N8 165 aaKnown RBP9.24□□□□□ -0.93
LIG4-204ENST00000611712 RAB3IPQ96QF0 476 aaPredicted RBP9.24□□□□□ -0.93
LIG4-204ENST00000611712 TGS1Q96RS0 853 aaKnown RBP9.24□□□□□ -0.93
LIG4-204ENST00000611712 TRAIPQ9BWF2 469 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 MYH8P13535 1937 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.24□□□□□ -0.93
LIG4-204ENST00000611712 FDX1P10109 184 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 PYGMP11217 842 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 FNTAP49354 379 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 ITGA8P53708 1063 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 SOX10P56693 466 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 XKR3Q5GH77 459 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 ZNF772Q68DY9 489 aaPredicted RBP9.24□□□□□ -0.93
LIG4-204ENST00000611712 C11orf63Q6NUN7 778 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 CASC4Q6P4E1 433 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 CCDC62Q6P9F0 684 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 SV2AQ7L0J3 742 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 PACS2Q86VP3 889 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 CD302Q8IX05 232 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 KCTD6Q8NC69 237 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 SYTL5Q8TDW5 730 aaPredicted RBP9.24□□□□□ -0.93
LIG4-204ENST00000611712 OSBPL8Q9BZF1 889 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 AGO4Q9HCK5 861 aaKnown RBP9.24□□□□□ -0.93
LIG4-204ENST00000611712 PRM3Q9NNZ6 103 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 TMEM51Q9NW97 253 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 IP6K2Q9UHH9 426 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 CICQ96RK0 1608 aaPredicted RBP9.24□□□□□ -0.93
LIG4-204ENST00000611712 C4AP0C0L4 1744 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 C4BP0C0L5 1744 aa9.24□□□□□ -0.93
LIG4-204ENST00000611712 CALB1P05937 261 aa9.23□□□□□ -0.93
LIG4-204ENST00000611712 RALAP11233 206 aa9.23□□□□□ -0.93
LIG4-204ENST00000611712 MSH2P43246 934 aa9.23□□□□□ -0.93
LIG4-204ENST00000611712 BAG6P46379 1132 aa9.23□□□□□ -0.93
LIG4-204ENST00000611712 BTNL9Q6UXG8 535 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms