RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 TTC17Q96AE7 1141 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 BAZ2AQ9UIF9 1905 aaKnown RBP11.03□□□□□ -0.64
CTCFL-216ENST00000608263 RGPD5Q99666 1765 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 H7C0C1 242 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 TXNDC9O14530 226 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 SLC16A3O15427 465 aaKnown RBP11.03□□□□□ -0.64
CTCFL-216ENST00000608263 SKAP2O75563 359 aaPredicted RBP11.03□□□□□ -0.64
CTCFL-216ENST00000608263 ATP5OP48047 213 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 ITGA8P53708 1063 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 CDO1Q16878 200 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 FBXL13Q8NEE6 735 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 PWWP2AQ96N64 755 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 WNT8AQ9H1J5 351 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 UNC45AQ9H3U1 944 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 NRBP2Q9NSY0 501 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 TNPO2O14787 897 aaKnown RBP11.03□□□□□ -0.64
CTCFL-216ENST00000608263 CLGNO14967 610 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 PYGMP11217 842 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 COILP38432 576 aaPredicted RBP11.03□□□□□ -0.64
CTCFL-216ENST00000608263 RPL21P46778 160 aaKnown RBP11.03□□□□□ -0.64
CTCFL-216ENST00000608263 DNAJC3Q13217 504 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 SNRNP35Q16560 246 aaKnown RBP11.03□□□□□ -0.64
CTCFL-216ENST00000608263 PALB2Q86YC2 1186 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 ARHGEF19Q8IW93 802 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 THNSL1Q8IYQ7 743 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 CFAP61Q8NHU2 1237 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 LNX1Q8TBB1 728 aaPredicted RBP11.03□□□□□ -0.64
CTCFL-216ENST00000608263 GLIS2Q9BZE0 524 aaPredicted RBP11.03□□□□□ -0.64
CTCFL-216ENST00000608263 VCPKMTQ9H867 229 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 NYAP2Q9P242 653 aa11.03□□□□□ -0.64
CTCFL-216ENST00000608263 DIS3Q9Y2L1 958 aaKnown RBP11.03□□□□□ -0.64
CTCFL-216ENST00000608263 ARHGAP42A6NI28 874 aa11.02□□□□□ -0.64
CTCFL-216ENST00000608263 YWHABP31946 246 aaKnown RBP11.02□□□□□ -0.64
CTCFL-216ENST00000608263 MSH2P43246 934 aa11.02□□□□□ -0.64
CTCFL-216ENST00000608263 TSNAXIP1Q2TAA8 658 aa11.02□□□□□ -0.64
CTCFL-216ENST00000608263 SLC13A5Q86YT5 568 aaPredicted RBP11.02□□□□□ -0.64
CTCFL-216ENST00000608263 RFX6Q8HWS3 928 aa11.02□□□□□ -0.64
CTCFL-216ENST00000608263 ZNF280CQ8ND82 737 aa11.02□□□□□ -0.64
CTCFL-216ENST00000608263 CCDC110Q8TBZ0 833 aa11.02□□□□□ -0.64
CTCFL-216ENST00000608263 ATP8B4Q8TF62 1192 aa11.02□□□□□ -0.64
CTCFL-216ENST00000608263 PYROXD1Q8WU10 500 aa11.02□□□□□ -0.64
CTCFL-216ENST00000608263 ATG4CQ96DT6 458 aa11.02□□□□□ -0.64
CTCFL-216ENST00000608263 PURBQ96QR8 312 aaKnown RBP11.02□□□□□ -0.64
CTCFL-216ENST00000608263 TXNDC16Q9P2K2 825 aa11.02□□□□□ -0.64
CTCFL-216ENST00000608263 CTNNAL1Q9UBT7 734 aa11.02□□□□□ -0.64
CTCFL-216ENST00000608263 SEL1LQ9UBV2 794 aa11.02□□□□□ -0.64
CTCFL-216ENST00000608263 SYNJ2BP-COX16A0A087WUM0 186 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 K7ERI5 159 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 IGF2BP3O00425 579 aaKnown RBP eCLIP11.02□□□□□ -0.65
CTCFL-216ENST00000608263 PIK3R2O00459 728 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 STAM2O75886 525 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 PIAS1O75925 651 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 UBOX5O94941 541 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 AGTP01019 485 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 TMEM191BP0C7N4 346 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 ZNF720Q7Z2F6 126 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 SPATA21Q7Z572 469 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 PRUNE1Q86TP1 453 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 CERS5Q8N5B7 392 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 RAB3IPQ96QF0 476 aaPredicted RBP11.02□□□□□ -0.65
CTCFL-216ENST00000608263 KCTD10Q9H3F6 313 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 NOP53Q9NZM5 478 aaKnown RBP11.02□□□□□ -0.65
CTCFL-216ENST00000608263 COX16Q9P0S2 106 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 ELF1P32519 619 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 PDIA2Q13087 525 aaKnown RBP11.02□□□□□ -0.65
CTCFL-216ENST00000608263 P3H4Q92791 437 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 RBM15Q96T37 977 aaKnown RBP eCLIP11.02□□□□□ -0.659e-11■□□□□ 8.6
CTCFL-216ENST00000608263 ZSWIM1Q9BR11 485 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 ADPGKQ9BRR6 497 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 YIPF3Q9GZM5 350 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 CDC42EP4Q9H3Q1 356 aaKnown RBP11.02□□□□□ -0.65
CTCFL-216ENST00000608263 NOD2Q9HC29 1040 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 ERVK-5Q9HDB9 667 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 KCNH7Q9NS40 1196 aa11.02□□□□□ -0.65
CTCFL-216ENST00000608263 SLITRK3O94933 977 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 RALAP11233 206 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 KRT10P13645 584 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 RASSF2P50749 326 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 YARSP54577 528 aaKnown RBP11.01□□□□□ -0.65
CTCFL-216ENST00000608263 P3H1Q32P28 736 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 NLRP7Q8WX94 980 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 ALG3Q92685 438 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 SNF8Q96H20 258 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 CFAP57Q96MR6 1250 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 SH3GL2Q99962 352 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 TUFT1Q9NNX1 390 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 TRAF3IP3Q9Y228 551 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 USP15Q9Y4E8 981 aaPredicted RBP11.01□□□□□ -0.65
CTCFL-216ENST00000608263 C5P01031 1676 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 ADM5C9JUS6 153 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 INHBAP08476 426 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 CCND2P30279 289 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 ARSEP51690 589 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 BPIFB4P59827 614 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 MSL3Q8N5Y2 521 aaKnown RBP11.01□□□□□ -0.65
CTCFL-216ENST00000608263 HSPH1Q92598 858 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 ERP27Q96DN0 273 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 CYTH2Q99418 400 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 SUGT1Q9Y2Z0 365 aa11.01□□□□□ -0.65
CTCFL-216ENST00000608263 COL1A1P02452 1464 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms