RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 APOBEC3GQ9HC16 384 aaKnown RBP17.08■□□□□ 0.32
CTSA-214ENST00000606788 STXBP5LQ9Y2K9 1186 aa17.08■□□□□ 0.32
CTSA-214ENST00000606788 WDR81Q562E7 1941 aa17.08■□□□□ 0.32
CTSA-214ENST00000606788 A0A0G2JLL6 359 aaPredicted RBP17.07■□□□□ 0.32
CTSA-214ENST00000606788 PRRT2Q7Z6L0 340 aaPredicted RBP17.07■□□□□ 0.32
CTSA-214ENST00000606788 SYCE1Q8N0S2 351 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 ZNF564Q8TBZ8 553 aaPredicted RBP17.07■□□□□ 0.32
CTSA-214ENST00000606788 HES6Q96HZ4 224 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.07■□□□□ 0.32
CTSA-214ENST00000606788 PCDHB4Q9Y5E5 795 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 ZC3H4Q9UPT8 1303 aaKnown RBP17.07■□□□□ 0.32
CTSA-214ENST00000606788 DDX3YO15523 660 aaKnown RBP17.07■□□□□ 0.32
CTSA-214ENST00000606788 CLDN3O15551 220 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 CST3P01034 146 aaPredicted RBP17.07■□□□□ 0.32
CTSA-214ENST00000606788 CAPN2P17655 700 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 KCNJ1P48048 391 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 TFAMQ00059 246 aaKnown RBP17.07■□□□□ 0.32
CTSA-214ENST00000606788 PPATQ06203 517 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 WDR44Q5JSH3 913 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 GOLGA6L1Q8N7Z2 621 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 CYFIP2Q96F07 1278 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 RUFY1Q96T51 708 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 C11orf70Q9BRQ4 267 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 MTMR12Q9C0I1 747 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 NRBP2Q9NSY0 501 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 SUCLA2Q9P2R7 463 aaPredicted RBP17.07■□□□□ 0.32
CTSA-214ENST00000606788 CNOT8Q9UFF9 292 aaKnown RBP17.07■□□□□ 0.32
CTSA-214ENST00000606788 PRDM4Q9UKN5 801 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 USTQ9Y2C2 406 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 EXTL3O43909 919 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 VNN1O95497 513 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 TUBBP07437 444 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 DPY19L2Q6NUT2 758 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 UHMK1Q8TAS1 419 aaKnown RBP17.07■□□□□ 0.32
CTSA-214ENST00000606788 PSPC1Q8WXF1 523 aaKnown RBP17.07■□□□□ 0.32
CTSA-214ENST00000606788 PBKQ96KB5 322 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 FGD4Q96M96 766 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 ACBD3Q9H3P7 528 aa17.07■□□□□ 0.32
CTSA-214ENST00000606788 O00370 1275 aa17.06■□□□□ 0.32
CTSA-214ENST00000606788 MAATS1Q7Z4T9 603 aa17.06■□□□□ 0.32
CTSA-214ENST00000606788 SLFN11Q7Z7L1 901 aa17.06■□□□□ 0.32
CTSA-214ENST00000606788 TMEM192Q8IY95 271 aa17.06■□□□□ 0.32
CTSA-214ENST00000606788 KLHL11Q9NVR0 708 aa17.06■□□□□ 0.32
CTSA-214ENST00000606788 NUB1Q9Y5A7 615 aa17.06■□□□□ 0.32
CTSA-214ENST00000606788 RTN2O75298 545 aa17.06■□□□□ 0.32
CTSA-214ENST00000606788 ZNF286BP0CG31 522 aa17.06■□□□□ 0.32
CTSA-214ENST00000606788 ATP1A2P50993 1020 aa17.06■□□□□ 0.32
CTSA-214ENST00000606788 GPC3P51654 580 aa17.06■□□□□ 0.32
CTSA-214ENST00000606788 EPHB4P54760 987 aa17.06■□□□□ 0.32
CTSA-214ENST00000606788 DPH6Q7L8W6 267 aa17.06■□□□□ 0.32
CTSA-214ENST00000606788 ZNF572Q7Z3I7 529 aaPredicted RBP17.06■□□□□ 0.32
CTSA-214ENST00000606788 C18orf8Q96DM3 657 aa17.06■□□□□ 0.32
CTSA-214ENST00000606788 FBXL18Q96ME1 805 aa17.06■□□□□ 0.32
CTSA-214ENST00000606788 ZIM3Q96PE6 472 aa17.06■□□□□ 0.32
CTSA-214ENST00000606788 RNPEPQ9H4A4 650 aa17.06■□□□□ 0.32
CTSA-214ENST00000606788 BTNL10A8MVZ5 291 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 SOCS7O14512 581 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 WEE2P0C1S8 567 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 RRM1P23921 792 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 ARL2P36404 184 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 SNX1Q13596 522 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 NEDD9Q14511 834 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 METTL7BQ6UX53 244 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 ANAPC7Q9UJX3 599 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 AGTPBP1Q9UPW5 1226 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 P4HA2O15460 535 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 KRT19P08727 400 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 ZBTB48P10074 688 aaPredicted RBP17.05■□□□□ 0.32
CTSA-214ENST00000606788 LAMTOR4Q0VGL1 99 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 ZFYVE27Q5T4F4 411 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 SCFD2Q8WU76 684 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 SLC10A4Q96EP9 437 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 C17orf75Q9HAS0 396 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 LCTP09848 1927 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 SPDYE5A6NIY4 337 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 PYGMP11217 842 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 GARTP22102 1010 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 CYP2C19P33261 490 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 NAMPTP43490 491 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 CDR2Q01850 454 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 GPR162Q16538 588 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 FAM160B1Q5W0V3 765 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 GPR20Q99678 358 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 MINDY3Q9H8M7 445 aa17.05■□□□□ 0.32
CTSA-214ENST00000606788 NXF1Q9UBU9 619 aaKnown RBP17.05■□□□□ 0.32
CTSA-214ENST00000606788 NCANO14594 1321 aa17.04■□□□□ 0.32
CTSA-214ENST00000606788 A0A0A6YYK5 440 aaPredicted RBP17.04■□□□□ 0.32
CTSA-214ENST00000606788 TMEM62Q0P6H9 643 aa17.04■□□□□ 0.32
CTSA-214ENST00000606788 PAK2Q13177 524 aa17.04■□□□□ 0.32
CTSA-214ENST00000606788 FAM182AQ5T1J6 154 aa17.04■□□□□ 0.32
CTSA-214ENST00000606788 ZDHHC14Q8IZN3 488 aa17.04■□□□□ 0.32
CTSA-214ENST00000606788 FAM71BQ8TC56 605 aa17.04■□□□□ 0.32
CTSA-214ENST00000606788 TMC2Q8TDI7 906 aa17.04■□□□□ 0.32
CTSA-214ENST00000606788 ISCUQ9H1K1 167 aa17.04■□□□□ 0.32
CTSA-214ENST00000606788 BCCIPQ9P287 314 aaKnown RBP eCLIP17.04■□□□□ 0.32
CTSA-214ENST00000606788 STAM2O75886 525 aa17.04■□□□□ 0.32
CTSA-214ENST00000606788 ATG7O95352 703 aa17.04■□□□□ 0.32
CTSA-214ENST00000606788 ICAM3P32942 547 aa17.04■□□□□ 0.32
CTSA-214ENST00000606788 ITIH3Q06033 890 aa17.04■□□□□ 0.32
CTSA-214ENST00000606788 EEF1DP3Q658K8 133 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms