RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 ZCCHC2Q9C0B9 1178 aaKnown RBP13.71□□□□□ -0.21
HLA-F-230ENST00000606273 EPS15L1Q9UBC2 864 aa13.71□□□□□ -0.21
HLA-F-230ENST00000606273 PCDHGA2Q9Y5H1 932 aa13.71□□□□□ -0.21
HLA-F-230ENST00000606273 PCDHGA11Q9Y5H2 935 aa13.71□□□□□ -0.21
HLA-F-230ENST00000606273 FNDC1Q4ZHG4 1894 aaPredicted RBP13.71□□□□□ -0.21
HLA-F-230ENST00000606273 MEIS2O14770 477 aa13.7□□□□□ -0.22
HLA-F-230ENST00000606273 JAK2O60674 1132 aa13.7□□□□□ -0.22
HLA-F-230ENST00000606273 FDPSP14324 419 aaKnown RBP13.7□□□□□ -0.22
HLA-F-230ENST00000606273 GBP2P32456 591 aaPredicted RBP13.7□□□□□ -0.22
HLA-F-230ENST00000606273 STAT5BP51692 787 aa13.7□□□□□ -0.22
HLA-F-230ENST00000606273 POLGP54098 1239 aaPredicted RBP13.7□□□□□ -0.22
HLA-F-230ENST00000606273 STARD6P59095 220 aa13.7□□□□□ -0.22
HLA-F-230ENST00000606273 PTPN14Q15678 1187 aa13.7□□□□□ -0.22
HLA-F-230ENST00000606273 PLA2G4EQ3MJ16 856 aa13.7□□□□□ -0.22
HLA-F-230ENST00000606273 DDX53Q86TM3 631 aaKnown RBP13.7□□□□□ -0.22
HLA-F-230ENST00000606273 TMEM173Q86WV6 379 aaPredicted RBP13.7□□□□□ -0.22
HLA-F-230ENST00000606273 ECHDC2Q86YB7 292 aa13.7□□□□□ -0.22
HLA-F-230ENST00000606273 ZNF295-AS1Q8N0V1 137 aa13.7□□□□□ -0.22
HLA-F-230ENST00000606273 GOLGA6L1Q8N7Z2 621 aa13.7□□□□□ -0.22
HLA-F-230ENST00000606273 SMARCC2Q8TAQ2 1214 aa13.7□□□□□ -0.22
HLA-F-230ENST00000606273 RNF26Q9BY78 433 aaPredicted RBP13.7□□□□□ -0.22
HLA-F-230ENST00000606273 EPC1Q9H2F5 836 aa13.7□□□□□ -0.22
HLA-F-230ENST00000606273 PARD6AQ9NPB6 346 aa13.7□□□□□ -0.22
HLA-F-230ENST00000606273 USP18Q9UMW8 372 aa13.7□□□□□ -0.22
HLA-F-230ENST00000606273 LIMCH1Q9UPQ0 1083 aa13.7□□□□□ -0.22
HLA-F-230ENST00000606273 CPLX1O14810 134 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 MAFGO15525 162 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 LILRB5O75023 590 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 SKIP12755 728 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 CLCN4P51793 760 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 CSTF1Q05048 431 aaKnown RBP13.69□□□□□ -0.22
HLA-F-230ENST00000606273 MTMR1Q13613 665 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 UBE2SQ16763 222 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 KIZQ2M2Z5 673 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 FIGNL1Q6PIW4 674 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 CCDC83Q8IWF9 413 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 NSUN7Q8NE18 718 aaKnown RBP13.69□□□□□ -0.22
HLA-F-230ENST00000606273 NELL1Q92832 810 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 KLHL5Q96PQ7 755 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 OSMRQ99650 979 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 ALG2Q9H553 416 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 JPH1Q9HDC5 661 aaPredicted RBP13.69□□□□□ -0.22
HLA-F-230ENST00000606273 WDR6Q9NNW5 1121 aaKnown RBP13.69□□□□□ -0.22
HLA-F-230ENST00000606273 SLC2A4RGQ9NR83 387 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 GJB4Q9NTQ9 266 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 SPATA6Q9NWH7 488 aaPredicted RBP13.69□□□□□ -0.22
HLA-F-230ENST00000606273 BARHL2Q9NY43 387 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 SMG5Q9UPR3 1016 aaKnown RBP13.69□□□□□ -0.22
HLA-F-230ENST00000606273 PCDHGC4Q9Y5F7 938 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 UBIAD1Q9Y5Z9 338 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 USP3Q9Y6I4 520 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 GPR179Q6PRD1 2367 aa13.69□□□□□ -0.22
HLA-F-230ENST00000606273 MAP1BP46821 2468 aaKnown RBP13.69□□□□□ -0.22
HLA-F-230ENST00000606273 A6NJY4 79 aa13.68□□□□□ -0.22
HLA-F-230ENST00000606273 CDK2AP1O14519 115 aa13.68□□□□□ -0.22
HLA-F-230ENST00000606273 SLC30A4O14863 429 aa13.68□□□□□ -0.22
HLA-F-230ENST00000606273 LAMTOR5O43504 91 aa13.68□□□□□ -0.22
HLA-F-230ENST00000606273 TBC1D4O60343 1298 aa13.68□□□□□ -0.22
HLA-F-230ENST00000606273 GPR32O75388 356 aa13.68□□□□□ -0.22
HLA-F-230ENST00000606273 ZSCAN20P17040 1043 aaPredicted RBP13.68□□□□□ -0.22
HLA-F-230ENST00000606273 NAPAP54920 295 aa13.68□□□□□ -0.22
HLA-F-230ENST00000606273 SSRP1Q08945 709 aaKnown RBP13.68□□□□□ -0.22
HLA-F-230ENST00000606273 EML3Q32P44 896 aa13.68□□□□□ -0.22
HLA-F-230ENST00000606273 NLRP8Q86W28 1048 aa13.68□□□□□ -0.22
HLA-F-230ENST00000606273 RNF169Q8NCN4 708 aa13.68□□□□□ -0.22
HLA-F-230ENST00000606273 CMASQ8NFW8 434 aaPredicted RBP13.68□□□□□ -0.22
HLA-F-230ENST00000606273 COL26A1Q96A83 441 aa13.68□□□□□ -0.22
HLA-F-230ENST00000606273 IGSF21Q96ID5 467 aa13.68□□□□□ -0.22
HLA-F-230ENST00000606273 MYADMQ96S97 322 aa13.68□□□□□ -0.22
HLA-F-230ENST00000606273 PPP1R16BQ96T49 567 aa13.68□□□□□ -0.22
HLA-F-230ENST00000606273 JADE2Q9NQC1 790 aa13.68□□□□□ -0.22
HLA-F-230ENST00000606273 ZSCAN32Q9NX65 697 aa13.68□□□□□ -0.22
HLA-F-230ENST00000606273 VPS54Q9P1Q0 977 aa13.68□□□□□ -0.22
HLA-F-230ENST00000606273 SLC9A2Q9UBY0 812 aa13.68□□□□□ -0.22
HLA-F-230ENST00000606273 USP24Q9UPU5 2620 aa13.68□□□□□ -0.22
HLA-F-230ENST00000606273 ITGB2P05107 769 aa13.67□□□□□ -0.22
HLA-F-230ENST00000606273 KLRC2P26717 231 aa13.67□□□□□ -0.22
HLA-F-230ENST00000606273 ACTR2P61160 394 aa13.67□□□□□ -0.22
HLA-F-230ENST00000606273 DMWDQ09019 674 aa13.67□□□□□ -0.22
HLA-F-230ENST00000606273 HELQQ8TDG4 1101 aa13.67□□□□□ -0.22
HLA-F-230ENST00000606273 STAMQ92783 540 aa13.67□□□□□ -0.22
HLA-F-230ENST00000606273 CUL5Q93034 780 aa13.67□□□□□ -0.22
HLA-F-230ENST00000606273 POM121Q96HA1 1249 aa13.67□□□□□ -0.22
HLA-F-230ENST00000606273 SHDQ96IW2 340 aa13.67□□□□□ -0.22
HLA-F-230ENST00000606273 TMX3Q96JJ7 454 aa13.67□□□□□ -0.22
HLA-F-230ENST00000606273 BCO2Q9BYV7 579 aa13.67□□□□□ -0.22
HLA-F-230ENST00000606273 PSTPIP2Q9H939 334 aa13.67□□□□□ -0.22
HLA-F-230ENST00000606273 KAT6AQ92794 2004 aa13.66□□□□□ -0.22
HLA-F-230ENST00000606273 SPTBN2O15020 2390 aa13.66□□□□□ -0.22
HLA-F-230ENST00000606273 ATRXP46100 2492 aa13.66□□□□□ -0.22
HLA-F-230ENST00000606273 DOCK5Q9H7D0 1870 aa13.66□□□□□ -0.22
HLA-F-230ENST00000606273 A0A0U1RQF3 1178 aa13.66□□□□□ -0.22
HLA-F-230ENST00000606273 CCDC195A0A1B0GUA6 201 aa13.66□□□□□ -0.22
HLA-F-230ENST00000606273 A0A1W2PNR3 127 aa13.66□□□□□ -0.22
HLA-F-230ENST00000606273 KANSL1LA0AUZ9 987 aa13.66□□□□□ -0.22
HLA-F-230ENST00000606273 SMCO2A6NFE2 343 aa13.66□□□□□ -0.22
HLA-F-230ENST00000606273 ANHXE9PGG2 379 aa13.66□□□□□ -0.22
HLA-F-230ENST00000606273 HBP1O60381 514 aa13.66□□□□□ -0.22
HLA-F-230ENST00000606273 ATG7O95352 703 aa13.66□□□□□ -0.22
HLA-F-230ENST00000606273 CNPP09543 421 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms