RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 SLC18A3Q16572 532 aa13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 ARHGAP29Q52LW3 1261 aa13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 RNF180Q86T96 592 aa13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 C16orf45Q96MC5 204 aaPredicted RBP13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 SCLT1Q96NL6 688 aa13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 PDZD7Q9H5P4 517 aa13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 HDAC6Q9UBN7 1215 aa13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 DERAQ9Y315 318 aa13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.28□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 PJA2O43164 708 aa13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 KRT86O43790 486 aa13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 AKR1B10O60218 316 aa13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 IQCF3P0C7M6 154 aa13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 DLATP10515 647 aaKnown RBP13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TNNI1P19237 187 aa13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 EIF4BP23588 611 aaKnown RBP13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TBXAS1P24557 533 aaPredicted RBP13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 EIF4A3P38919 411 aaKnown RBP13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 GRM5P41594 1212 aa13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 CAP1Q01518 475 aa13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 MAP2K1Q02750 393 aaPredicted RBP13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 DRAP1Q14919 205 aaPredicted RBP13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TDRD12Q587J7 1177 aaKnown RBP13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 DNTTIP2Q5QJE6 756 aaKnown RBP13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 PHLDB3Q6NSJ2 640 aa13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 NOTUMQ6P988 496 aa13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 SLC27A1Q6PCB7 646 aa13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 SERINC5Q86VE9 423 aa13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 KIF18AQ8NI77 898 aa13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 SHC3Q92529 594 aa13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TAF4BQ92750 862 aa13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 GPR88Q9GZN0 384 aa13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 RPF1Q9H9Y2 349 aaKnown RBP13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 PLEKHA5Q9HAU0 1116 aa13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 PDE11AQ9HCR9 933 aa13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 C1orf112Q9NSG2 853 aa13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TRMT1Q9NXH9 659 aaKnown RBP13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 INTUQ9ULD6 942 aa13.27□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 MYADML2A6NDP7 307 aa13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TTLL13PA6NNM8 815 aa13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 BTNL10A8MVZ5 291 aa13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 M0QZ92 97 aa13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TREHO43280 583 aa13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 B4GALT5O43286 388 aa13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 KIF5CO60282 957 aa13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ECM2O94769 699 aaPredicted RBP13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 CCND3P30281 292 aaPredicted RBP13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 DUOXA2Q1HG44 320 aa13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TMEM132AQ24JP5 1023 aa13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 WDR44Q5JSH3 913 aa13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TDRD10Q5VZ19 366 aaKnown RBP13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 FAM71AQ8IYT1 594 aa13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 HELQQ8TDG4 1101 aa13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TAS1R2Q8TE23 839 aa13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ZNF516Q92618 1163 aa13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 DESI2Q9BSY9 194 aa13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 IFIH1Q9BYX4 1025 aaKnown RBP13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 IMPG2Q9BZV3 1241 aa13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 NENFQ9UMX5 172 aa13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 REXO2Q9Y3B8 237 aaKnown RBP13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 C2CD2Q9Y426 696 aa13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 SQORQ9Y6N5 450 aa13.26□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 MROH7Q68CQ1 1323 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 EVI5O60447 810 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 PGK1P00558 417 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 HLA-DRAP01903 254 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ASGR1P07306 291 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ELNP15502 786 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 GRK4P32298 578 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 PIK3CAP42336 1068 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 MRPS6P82932 125 aaKnown RBP13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TRIM32Q13049 653 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TUBB2AQ13885 445 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 SNX17Q15036 470 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ENOX2Q16206 610 aaKnown RBP13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 KIZQ2M2Z5 673 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 NBPF20Q3BBV1 942 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 EEF1DP3Q658K8 133 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 RUFY4Q6ZNE9 571 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 CATSPER4Q7RTX7 472 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 KIAA1328Q86T90 577 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ACRBPQ8NEB7 543 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ZNF296Q8WUU4 475 aaPredicted RBP13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 DNAJB3Q8WWF6 145 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 SEMA4DQ92854 862 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ZBTB10Q96DT7 871 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ANKRD36BP1Q96IX9 119 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 CALR3Q96L12 384 aaKnown RBP13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 SYT11Q9BT88 431 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TUBB2BQ9BVA1 445 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 CCDC94Q9BW85 323 aaPredicted RBP13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 FAM49AQ9H0Q0 323 aaPredicted RBP13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 VRTNQ9H8Y1 702 aa13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 HMX1Q9NP08 348 aaPredicted RBP13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 UBE2TQ9NPD8 197 aaPredicted RBP13.25□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 PTPRJQ12913 1337 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 STAU1O95793 577 aaKnown RBP13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 ASS1P00966 412 aaKnown RBP13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 TNNC2P02585 160 aa13.24□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 INHAP05111 366 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms