RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 PRPF18Q99633 342 aaKnown RBP10.12□□□□□ -0.79
CSMD1-217ENST00000602723 INTS2Q9H0H0 1204 aaKnown RBP10.12□□□□□ -0.79
CSMD1-217ENST00000602723 CASZ1Q86V15 1759 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 MCAMP43121 646 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 SDK1Q7Z5N4 2213 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 RFWD2Q8NHY2 731 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.12□□□□□ -0.79
CSMD1-217ENST00000602723 UNC45AQ9H3U1 944 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 VIPAS39Q9H9C1 493 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 IL6STP40189 918 aaPredicted RBP10.12□□□□□ -0.79
CSMD1-217ENST00000602723 PPP1R18Q6NYC8 613 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 GGT7Q9UJ14 662 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 ARAP3Q8WWN8 1544 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 LSP1P33241 339 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 PLOD1Q02809 727 aaPredicted RBP10.12□□□□□ -0.79
CSMD1-217ENST00000602723 BYSLQ13895 437 aaKnown RBP10.12□□□□□ -0.79
CSMD1-217ENST00000602723 ARHGAP27Q6ZUM4 889 aa10.12□□□□□ -0.79
CSMD1-217ENST00000602723 SLC9A1P19634 815 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 ENOSF1Q7L5Y1 443 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 CLEC4FQ8N1N0 589 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 TSPAN17Q96FV3 270 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 TMEM245Q9H330 911 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 CXorf56Q9H5V9 222 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 KRT16P08779 473 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 NT5C2P49902 561 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 NAA30Q147X3 362 aaPredicted RBP10.11□□□□□ -0.79
CSMD1-217ENST00000602723 NECTIN1Q15223 517 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 TRADDQ15628 312 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 AASDHQ4L235 1098 aaPredicted RBP10.11□□□□□ -0.79
CSMD1-217ENST00000602723 SPDYAQ5MJ70 313 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 SH2D3CQ8N5H7 860 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 ZSCAN32Q9NX65 697 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 SNX12Q9UMY4 172 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 H0YC42 278 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 KCNN4O15554 427 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 EIF3EP60228 445 aaKnown RBP10.11□□□□□ -0.79
CSMD1-217ENST00000602723 ZNF473Q8WTR7 871 aaKnown RBP10.11□□□□□ -0.79
CSMD1-217ENST00000602723 POLIQ9UNA4 740 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 UBA6A0AVT1 1052 aaPredicted RBP10.11□□□□□ -0.79
CSMD1-217ENST00000602723 APRTP07741 180 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 MYL2P10916 166 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 KIF2CQ99661 725 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 DBNDD1Q9H9R9 158 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 PNMA3Q9UL41 463 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 ZNF280CQ8ND82 737 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 ATL2Q8NHH9 583 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 ASIC4Q96FT7 647 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 GJB4Q9NTQ9 266 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 USE1Q9NZ43 259 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 MOSPD1Q9UJG1 213 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 REREQ9P2R6 1566 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 TRIM66O15016 1216 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 IREB2P48200 963 aaKnown RBP10.11□□□□□ -0.79
CSMD1-217ENST00000602723 USPL1Q5W0Q7 1092 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 GALNT4Q8N4A0 578 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 ERP27Q96DN0 273 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 CCDC134Q9H6E4 229 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 EMSYQ7Z589 1322 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 DSG1Q02413 1049 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 TMEM179Q6ZVK1 233 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 TNIP2Q8NFZ5 429 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 LY9Q9HBG7 655 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 CAB39Q9Y376 341 aaPredicted RBP10.11□□□□□ -0.79
CSMD1-217ENST00000602723 CDH16O75309 829 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 BBOX1O75936 387 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 ZNF235Q14590 738 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 TRIP10Q15642 601 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 ANKRD40Q6AI12 368 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 RBM15Q96T37 977 aaKnown RBP eCLIP10.11□□□□□ -0.79
CSMD1-217ENST00000602723 TRIM62Q9BVG3 475 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 KLHL11Q9NVR0 708 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 CEP152O94986 1710 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 ERVK-7P63135 1459 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 MYH1P12882 1939 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 MYH2Q9UKX2 1941 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 MYH4Q9Y623 1939 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 PHF20L1A8MW92 1017 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 ADORA2BP29275 332 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 TXNRD1Q16881 649 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 RINLQ6ZS11 566 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 MIGA2Q7L4E1 593 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 CEP95Q96GE4 821 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 KCNK16Q96T55 309 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 AATKQ6ZMQ8 1374 aa10.11□□□□□ -0.79
CSMD1-217ENST00000602723 PHF2O75151 1096 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 TBL3Q12788 808 aaKnown RBP10.1□□□□□ -0.79
CSMD1-217ENST00000602723 FRMD5Q7Z6J6 570 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 SH3RF3Q8TEJ3 882 aaPredicted RBP10.1□□□□□ -0.79
CSMD1-217ENST00000602723 FAM162AQ96A26 154 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 SEC16BQ96JE7 1060 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 LXNQ9BS40 222 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 RANBP17Q9H2T7 1088 aaKnown RBP10.1□□□□□ -0.79
CSMD1-217ENST00000602723 NSMCE4AQ9NXX6 385 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 KNL1Q8NG31 2342 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 MYO3BQ8WXR4 1341 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 BCORL1Q5H9F3 1711 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 IGF2BP3O00425 579 aaKnown RBP eCLIP10.1□□□□□ -0.79
CSMD1-217ENST00000602723 TEX33O43247 280 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 TRIM49P0CI25 452 aa10.1□□□□□ -0.79
CSMD1-217ENST00000602723 TRIM49CP0CI26 452 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms