RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 CDKAL1Q5VV42 579 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 TCERG1LQ5VWI1 586 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 PPP2R2DQ66LE6 453 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 CFAP161Q6P656 301 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 CADM3Q8N126 398 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 NKAIN3Q8N8D7 197 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 TOR1AIP2Q8NFQ8 470 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 PPP1R13BQ96KQ4 1090 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 SAMD11Q96NU1 681 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 IGKV6D-41A0A0C4DH26 115 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 DGKIO75912 1065 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 APOEP02649 317 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 MYL3P08590 195 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 GTF2IP78347 998 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 CCDC40Q4G0X9 1142 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 BRDTQ58F21 947 aaPredicted RBP8.14□□□□□ -1.11
HCG18-244ENST00000602516 SPECC1LQ69YQ0 1117 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 SIGIRRQ6IA17 410 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 HEATR3Q7Z4Q2 680 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 CCDC116Q8IYX3 515 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 RASGRP4Q8TDF6 673 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 WDR60Q8WVS4 1066 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 NTPCRQ9BSD7 190 aaKnown RBP8.14□□□□□ -1.11
HCG18-244ENST00000602516 NDEL1Q9GZM8 345 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 SCPEP1Q9HB40 452 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 ARNT2Q9HBZ2 717 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 PLCB1Q9NQ66 1216 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 HERC5Q9UII4 1024 aaKnown RBP8.14□□□□□ -1.11
HCG18-244ENST00000602516 SATB2Q9UPW6 733 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 TELO2Q9Y4R8 837 aa8.14□□□□□ -1.11
HCG18-244ENST00000602516 CCDC162PA2VCL2 907 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 C3orf80F5H4A9 247 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 BIRC5O15392 142 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 GOLGA8HP0CJ92 632 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 P3H1Q32P28 736 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 SNX30Q5VWJ9 437 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 CCDC81Q6ZN84 652 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 BTN2A1Q7KYR7 527 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 CERS5Q8N5B7 392 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 STK32AQ8WU08 396 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 NRBF2Q96F24 287 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 NUP58Q9BVL2 599 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 RIOX1Q9H6W3 641 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 DMAP1Q9NPF5 467 aaPredicted RBP8.13□□□□□ -1.11
HCG18-244ENST00000602516 PFDN4Q9NQP4 134 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 CCDC177Q9NQR7 707 aaPredicted RBP8.13□□□□□ -1.11
HCG18-244ENST00000602516 STARD7Q9NQZ5 370 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 CNTN3Q9P232 1028 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 L3MBTL1Q9Y468 752 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 ZNF646O15015 1829 aaPredicted RBP8.13□□□□□ -1.11
HCG18-244ENST00000602516 ADAMTSL1Q8N6G6 1762 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 MYO3BQ8WXR4 1341 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 ESYT2A0FGR8 921 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 PRRT4C9JH25 899 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 PSMD14O00487 310 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 CCNT1O60563 726 aaKnown RBP8.13□□□□□ -1.11
HCG18-244ENST00000602516 SNHG28P0DPA3 235 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 FDX1P10109 184 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 NPR1P16066 1061 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 LSP1P33241 339 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 PBX1P40424 430 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 ROR1Q01973 937 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 BYSLQ13895 437 aaKnown RBP8.13□□□□□ -1.11
HCG18-244ENST00000602516 MTERF2Q49AM1 385 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 CEP78Q5JTW2 689 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 C6orf132Q5T0Z8 1188 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 RNF187Q5TA31 235 aaPredicted RBP8.13□□□□□ -1.11
HCG18-244ENST00000602516 DUS1LQ6P1R4 473 aaKnown RBP8.13□□□□□ -1.11
HCG18-244ENST00000602516 USP17L2Q6R6M4 530 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 DTHD1Q6ZMT9 781 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 C3orf62Q6ZUJ4 267 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 DDX42Q86XP3 938 aaKnown RBP eCLIP8.13□□□□□ -1.11
HCG18-244ENST00000602516 SYTL1Q8IYJ3 562 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 TC2NQ8N9U0 490 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 CDC26Q8NHZ8 85 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 DQX1Q8TE96 717 aaKnown RBP8.13□□□□□ -1.11
HCG18-244ENST00000602516 CCDC12Q8WUD4 166 aaPredicted RBP8.13□□□□□ -1.11
HCG18-244ENST00000602516 IRGQQ8WZA9 623 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 SMC6Q96SB8 1091 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 TMEM60Q9H2L4 133 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 SLC40A1Q9NP59 571 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 EDARQ9UNE0 448 aa8.13□□□□□ -1.11
HCG18-244ENST00000602516 C17orf113A0A1B0GUU1 675 aa8.12□□□□□ -1.11
HCG18-244ENST00000602516 RHOBTB3O94955 611 aa8.12□□□□□ -1.11
HCG18-244ENST00000602516 KRT13P13646 458 aa8.12□□□□□ -1.11
HCG18-244ENST00000602516 CCT5P48643 541 aa8.12□□□□□ -1.11
HCG18-244ENST00000602516 AP3M2P53677 418 aa8.12□□□□□ -1.11
HCG18-244ENST00000602516 MOGSQ13724 837 aa8.12□□□□□ -1.11
HCG18-244ENST00000602516 BRD3Q15059 726 aa8.12□□□□□ -1.11
HCG18-244ENST00000602516 HSP90AA4PQ58FG1 418 aa8.12□□□□□ -1.11
HCG18-244ENST00000602516 ZNF658Q5TYW1 1059 aaPredicted RBP8.12□□□□□ -1.11
HCG18-244ENST00000602516 CCDC62Q6P9F0 684 aa8.12□□□□□ -1.11
HCG18-244ENST00000602516 CCDC84Q86UT8 332 aaPredicted RBP8.12□□□□□ -1.11
HCG18-244ENST00000602516 COL23A1Q86Y22 540 aaPredicted RBP8.12□□□□□ -1.11
HCG18-244ENST00000602516 LSMEM1Q8N8F7 131 aa8.12□□□□□ -1.11
HCG18-244ENST00000602516 FATE1Q969F0 183 aa8.12□□□□□ -1.11
HCG18-244ENST00000602516 RRP36Q96EU6 259 aaKnown RBP8.12□□□□□ -1.11
HCG18-244ENST00000602516 CIB1Q99828 191 aa8.12□□□□□ -1.11
HCG18-244ENST00000602516 ADAM33Q9BZ11 813 aa8.12□□□□□ -1.11
HCG18-244ENST00000602516 CEP44Q9C0F1 390 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms