RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-231ENST00000602190 NPTXRO95502 500 aa20.29■□□□□ 0.84
IRF3-231ENST00000602190 CYP4A11Q02928 519 aa20.29■□□□□ 0.84
IRF3-231ENST00000602190 PSMD5Q16401 504 aa20.29■□□□□ 0.84
IRF3-231ENST00000602190 MAMSTRQ6ZN01 415 aa20.29■□□□□ 0.84
IRF3-231ENST00000602190 CENPQQ7L2Z9 268 aaPredicted RBP20.29■□□□□ 0.84
IRF3-231ENST00000602190 SLFN12Q8IYM2 578 aa20.29■□□□□ 0.84
IRF3-231ENST00000602190 RABGGTAQ92696 567 aa20.29■□□□□ 0.84
IRF3-231ENST00000602190 TNFRSF25Q93038 417 aa20.29■□□□□ 0.84
IRF3-231ENST00000602190 EIF2AK1Q9BQI3 630 aaKnown RBP20.29■□□□□ 0.84
IRF3-231ENST00000602190 TM6SF1Q9BZW5 370 aa20.29■□□□□ 0.84
IRF3-231ENST00000602190 TRIM6Q9C030 488 aaPredicted RBP20.29■□□□□ 0.84
IRF3-231ENST00000602190 FZD8Q9H461 694 aa20.29■□□□□ 0.84
IRF3-231ENST00000602190 ZSCAN32Q9NX65 697 aa20.29■□□□□ 0.84
IRF3-231ENST00000602190 CCNT1O60563 726 aaKnown RBP20.28■□□□□ 0.84
IRF3-231ENST00000602190 TDGF1P13385 188 aa20.28■□□□□ 0.84
IRF3-231ENST00000602190 SDHBP21912 280 aa20.28■□□□□ 0.84
IRF3-231ENST00000602190 FGFR3P22607 806 aa20.28■□□□□ 0.84
IRF3-231ENST00000602190 TARSP26639 723 aaKnown RBP20.28■□□□□ 0.84
IRF3-231ENST00000602190 PPM1LQ5SGD2 360 aa20.28■□□□□ 0.84
IRF3-231ENST00000602190 LIN9Q5TKA1 542 aa20.28■□□□□ 0.84
IRF3-231ENST00000602190 NCAPH2Q6IBW4 605 aa20.28■□□□□ 0.84
IRF3-231ENST00000602190 PDXDC1Q6P996 788 aa20.28■□□□□ 0.84
IRF3-231ENST00000602190 CDR2LQ86X02 465 aaPredicted RBP20.28■□□□□ 0.84
IRF3-231ENST00000602190 OXER1Q8TDS5 423 aa20.28■□□□□ 0.84
IRF3-231ENST00000602190 HINFPQ9BQA5 517 aa20.28■□□□□ 0.84
IRF3-231ENST00000602190 CXCL16Q9H2A7 254 aa20.28■□□□□ 0.84
IRF3-231ENST00000602190 SLKQ9H2G2 1235 aaPredicted RBP20.28■□□□□ 0.84
IRF3-231ENST00000602190 SPATA6Q9NWH7 488 aaPredicted RBP20.28■□□□□ 0.84
IRF3-231ENST00000602190 KLK14Q9P0G3 267 aa20.28■□□□□ 0.84
IRF3-231ENST00000602190 DNMT3BQ9UBC3 853 aaKnown RBP20.28■□□□□ 0.84
IRF3-231ENST00000602190 MTRRQ9UBK8 725 aa20.28■□□□□ 0.84
IRF3-231ENST00000602190 FAM170BA6NMN3 283 aa20.27■□□□□ 0.84
IRF3-231ENST00000602190 CPLX1O14810 134 aa20.27■□□□□ 0.84
IRF3-231ENST00000602190 XYLBO75191 536 aa20.27■□□□□ 0.84
IRF3-231ENST00000602190 ECI2O75521 394 aa20.27■□□□□ 0.84
IRF3-231ENST00000602190 ELAVL2Q12926 359 aaKnown RBP20.27■□□□□ 0.84
IRF3-231ENST00000602190 FAM171A1Q5VUB5 890 aa20.27■□□□□ 0.84
IRF3-231ENST00000602190 CD300LGQ6UXG3 332 aa20.27■□□□□ 0.84
IRF3-231ENST00000602190 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.27■□□□□ 0.84
IRF3-231ENST00000602190 CNTNAP3BQ96NU0 1288 aa20.27■□□□□ 0.84
IRF3-231ENST00000602190 NELL2Q99435 816 aa20.27■□□□□ 0.84
IRF3-231ENST00000602190 CNTNAP3Q9BZ76 1288 aa20.27■□□□□ 0.84
IRF3-231ENST00000602190 DAXXQ9UER7 740 aaPredicted RBP20.27■□□□□ 0.84
IRF3-231ENST00000602190 MAP1BP46821 2468 aaKnown RBP20.26■□□□□ 0.83
IRF3-231ENST00000602190 TTLL13PA6NNM8 815 aa20.26■□□□□ 0.83
IRF3-231ENST00000602190 CCL16O15467 120 aa20.26■□□□□ 0.83
IRF3-231ENST00000602190 XRCC6P12956 609 aaKnown RBP eCLIP20.26■□□□□ 0.83
IRF3-231ENST00000602190 RBM25P49756 843 aaKnown RBP20.26■□□□□ 0.83
IRF3-231ENST00000602190 ATXN1P54253 815 aaKnown RBP20.26■□□□□ 0.83
IRF3-231ENST00000602190 PIK3AP1Q6ZUJ8 805 aa20.26■□□□□ 0.83
IRF3-231ENST00000602190 TPH2Q8IWU9 490 aa20.26■□□□□ 0.83
IRF3-231ENST00000602190 SLC7A14Q8TBB6 771 aa20.26■□□□□ 0.83
IRF3-231ENST00000602190 FAM126AQ9BYI3 521 aaPredicted RBP20.26■□□□□ 0.83
IRF3-231ENST00000602190 PDZD7Q9H5P4 517 aa20.26■□□□□ 0.83
IRF3-231ENST00000602190 GJB4Q9NTQ9 266 aa20.26■□□□□ 0.83
IRF3-231ENST00000602190 PRMT7Q9NVM4 692 aaPredicted RBP20.26■□□□□ 0.83
IRF3-231ENST00000602190 HCFC1R1Q9NWW0 138 aa20.26■□□□□ 0.83
IRF3-231ENST00000602190 SMG5Q9UPR3 1016 aaKnown RBP20.26■□□□□ 0.83
IRF3-231ENST00000602190 CASTOR2A6NHX0 329 aa20.25■□□□□ 0.83
IRF3-231ENST00000602190 PRR5-ARHGAP8B1AHC4 643 aa20.25■□□□□ 0.83
IRF3-231ENST00000602190 ARHGAP8P85298 464 aa20.25■□□□□ 0.83
IRF3-231ENST00000602190 UBXN2BQ14CS0 331 aa20.25■□□□□ 0.83
IRF3-231ENST00000602190 ZBTB41Q5SVQ8 909 aa20.25■□□□□ 0.83
IRF3-231ENST00000602190 AXDND1Q5T1B0 1012 aaPredicted RBP20.25■□□□□ 0.83
IRF3-231ENST00000602190 CPLX2Q6PUV4 134 aaKnown RBP20.25■□□□□ 0.83
IRF3-231ENST00000602190 HASPINQ8TF76 798 aa20.25■□□□□ 0.83
IRF3-231ENST00000602190 POLR3FQ9H1D9 316 aaPredicted RBP20.25■□□□□ 0.83
IRF3-231ENST00000602190 GDE1Q9NZC3 331 aa20.25■□□□□ 0.83
IRF3-231ENST00000602190 PARP2Q9UGN5 583 aa20.25■□□□□ 0.83
IRF3-231ENST00000602190 BACE2Q9Y5Z0 518 aa20.25■□□□□ 0.83
IRF3-231ENST00000602190 FAM205CA6NFA0 338 aa20.24■□□□□ 0.83
IRF3-231ENST00000602190 TBC1D4O60343 1298 aa20.24■□□□□ 0.83
IRF3-231ENST00000602190 RECQL4O94761 1208 aa20.24■□□□□ 0.83
IRF3-231ENST00000602190 REC8O95072 547 aa20.24■□□□□ 0.83
IRF3-231ENST00000602190 THP07101 528 aa20.24■□□□□ 0.83
IRF3-231ENST00000602190 FCARP24071 287 aa20.24■□□□□ 0.83
IRF3-231ENST00000602190 LMNB2Q03252 620 aa20.24■□□□□ 0.83
IRF3-231ENST00000602190 CSTF1Q05048 431 aaKnown RBP20.24■□□□□ 0.83
IRF3-231ENST00000602190 SCRN1Q12765 414 aa20.24■□□□□ 0.83
IRF3-231ENST00000602190 SLC5A9Q2M3M2 681 aa20.24■□□□□ 0.83
IRF3-231ENST00000602190 PABPC1LQ4VXU2 614 aaKnown RBP20.24■□□□□ 0.83
IRF3-231ENST00000602190 DNASE1L2Q92874 299 aa20.24■□□□□ 0.83
IRF3-231ENST00000602190 KXD1Q9BQD3 176 aa20.24■□□□□ 0.83
IRF3-231ENST00000602190 CCDC113Q9H0I3 377 aa20.24■□□□□ 0.83
IRF3-231ENST00000602190 NCDNQ9UBB6 729 aa20.24■□□□□ 0.83
IRF3-231ENST00000602190 CHD8Q9HCK8 2581 aa20.23■□□□□ 0.83
IRF3-231ENST00000602190 ARHGEF37A1IGU5 675 aa20.23■□□□□ 0.83
IRF3-231ENST00000602190 BAG4O95429 457 aaKnown RBP20.23■□□□□ 0.83
IRF3-231ENST00000602190 EDN1P05305 212 aa20.23■□□□□ 0.83
IRF3-231ENST00000602190 CD72P21854 359 aa20.23■□□□□ 0.83
IRF3-231ENST00000602190 IGFBP6P24592 240 aaPredicted RBP20.23■□□□□ 0.83
IRF3-231ENST00000602190 ATRIPQ8WXE1 791 aa20.23■□□□□ 0.83
IRF3-231ENST00000602190 PPP1R10Q96QC0 940 aaKnown RBP20.23■□□□□ 0.83
IRF3-231ENST00000602190 MTMR9Q96QG7 549 aa20.23■□□□□ 0.83
IRF3-231ENST00000602190 IER2Q9BTL4 223 aa20.23■□□□□ 0.83
IRF3-231ENST00000602190 PLA2G2FQ9BZM2 168 aa20.23■□□□□ 0.83
IRF3-231ENST00000602190 PARD6AQ9NPB6 346 aa20.23■□□□□ 0.83
IRF3-231ENST00000602190 PCDHA12Q9UN75 941 aa20.23■□□□□ 0.83
IRF3-231ENST00000602190 CYP46A1Q9Y6A2 500 aa20.23■□□□□ 0.83
IRF3-231ENST00000602190 USP24Q9UPU5 2620 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms