RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 CYP26C1Q6V0L0 522 aa19.35■□□□□ 0.69
SHKBP1-223ENST00000600552 KIFAP3Q92845 792 aa19.35■□□□□ 0.69
SHKBP1-223ENST00000600552 CLSTN3Q9BQT9 956 aa19.35■□□□□ 0.69
SHKBP1-223ENST00000600552 CACNA1HO95180 2353 aa19.35■□□□□ 0.69
SHKBP1-223ENST00000600552 TRIP11Q15643 1979 aa19.35■□□□□ 0.69
SHKBP1-223ENST00000600552 I3L4J1 428 aa19.34■□□□□ 0.69
SHKBP1-223ENST00000600552 CCL16O15467 120 aa19.34■□□□□ 0.69
SHKBP1-223ENST00000600552 ADAM12O43184 909 aa19.34■□□□□ 0.69
SHKBP1-223ENST00000600552 ZMYND10O75800 440 aa19.34■□□□□ 0.69
SHKBP1-223ENST00000600552 HARSP12081 509 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-223ENST00000600552 TRAPPC10P48553 1259 aa19.34■□□□□ 0.69
SHKBP1-223ENST00000600552 TOB1P50616 345 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-223ENST00000600552 CLCN5P51795 746 aa19.34■□□□□ 0.69
SHKBP1-223ENST00000600552 KRT79Q5XKE5 535 aa19.34■□□□□ 0.69
SHKBP1-223ENST00000600552 CWF19L1Q69YN2 538 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-223ENST00000600552 GRASPQ7Z6J2 395 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-223ENST00000600552 SLC44A3Q8N4M1 653 aa19.34■□□□□ 0.69
SHKBP1-223ENST00000600552 LNX1Q8TBB1 728 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-223ENST00000600552 RAB34Q9BZG1 259 aa19.34■□□□□ 0.69
SHKBP1-223ENST00000600552 GOLGA2P5Q9HBQ8 144 aa19.34■□□□□ 0.69
SHKBP1-223ENST00000600552 ZDHHC7Q9NXF8 308 aa19.34■□□□□ 0.69
SHKBP1-223ENST00000600552 DNM3Q9UQ16 869 aa19.34■□□□□ 0.69
SHKBP1-223ENST00000600552 ZFHX2Q9C0A1 2572 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-223ENST00000600552 ZMYM2Q9UBW7 1377 aa19.33■□□□□ 0.69
SHKBP1-223ENST00000600552 HIP1RO75146 1068 aa19.33■□□□□ 0.68
SHKBP1-223ENST00000600552 B3GAT3O94766 335 aa19.33■□□□□ 0.68
SHKBP1-223ENST00000600552 NPR3P17342 541 aa19.33■□□□□ 0.68
SHKBP1-223ENST00000600552 FSHRP23945 695 aa19.33■□□□□ 0.68
SHKBP1-223ENST00000600552 OR1D2P34982 312 aa19.33■□□□□ 0.68
SHKBP1-223ENST00000600552 CLCNKBP51801 687 aa19.33■□□□□ 0.68
SHKBP1-223ENST00000600552 NUBP1P53384 320 aa19.33■□□□□ 0.68
SHKBP1-223ENST00000600552 RAD51AP2Q09MP3 1159 aa19.33■□□□□ 0.68
SHKBP1-223ENST00000600552 APBB1IPQ7Z5R6 666 aaPredicted RBP19.33■□□□□ 0.68
SHKBP1-223ENST00000600552 PIK3R5Q8WYR1 880 aa19.33■□□□□ 0.68
SHKBP1-223ENST00000600552 PLIN2Q99541 437 aa19.33■□□□□ 0.68
SHKBP1-223ENST00000600552 TCHPQ9BT92 498 aa19.33■□□□□ 0.68
SHKBP1-223ENST00000600552 EPS15L1Q9UBC2 864 aa19.33■□□□□ 0.68
SHKBP1-223ENST00000600552 SFI1A8K8P3 1242 aa19.32■□□□□ 0.68
SHKBP1-223ENST00000600552 C8AP07357 584 aa19.32■□□□□ 0.68
SHKBP1-223ENST00000600552 LAMP2P13473 410 aa19.32■□□□□ 0.68
SHKBP1-223ENST00000600552 MUTP22033 750 aa19.32■□□□□ 0.68
SHKBP1-223ENST00000600552 YARSP54577 528 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-223ENST00000600552 ELAVL2Q12926 359 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-223ENST00000600552 PDIA5Q14554 519 aa19.32■□□□□ 0.68
SHKBP1-223ENST00000600552 DTHD1Q6ZMT9 781 aa19.32■□□□□ 0.68
SHKBP1-223ENST00000600552 CEP120Q8N960 986 aa19.32■□□□□ 0.68
SHKBP1-223ENST00000600552 KIF2CQ99661 725 aa19.32■□□□□ 0.68
SHKBP1-223ENST00000600552 RUSC1Q9BVN2 902 aa19.32■□□□□ 0.68
SHKBP1-223ENST00000600552 KMT5AQ9NQR1 393 aa19.32■□□□□ 0.68
SHKBP1-223ENST00000600552 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.32■□□□□ 0.68
SHKBP1-223ENST00000600552 FBXW11Q9UKB1 542 aa19.32■□□□□ 0.68
SHKBP1-223ENST00000600552 DOCK8Q8NF50 2099 aa19.32■□□□□ 0.68
SHKBP1-223ENST00000600552 AOC1P19801 751 aa19.31■□□□□ 0.68
SHKBP1-223ENST00000600552 BRCC3P46736 316 aa19.31■□□□□ 0.68
SHKBP1-223ENST00000600552 NPTX2P47972 431 aa19.31■□□□□ 0.68
SHKBP1-223ENST00000600552 NAB2Q15742 525 aa19.31■□□□□ 0.68
SHKBP1-223ENST00000600552 IL17AQ16552 155 aa19.31■□□□□ 0.68
SHKBP1-223ENST00000600552 ZNF568Q3ZCX4 644 aa19.31■□□□□ 0.68
SHKBP1-223ENST00000600552 SPECC1Q5M775 1068 aa19.31■□□□□ 0.68
SHKBP1-223ENST00000600552 FRMD5Q7Z6J6 570 aa19.31■□□□□ 0.68
SHKBP1-223ENST00000600552 GPR65Q8IYL9 337 aa19.31■□□□□ 0.68
SHKBP1-223ENST00000600552 SLC7A14Q8TBB6 771 aa19.31■□□□□ 0.68
SHKBP1-223ENST00000600552 CCDC94Q9BW85 323 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-223ENST00000600552 TARS2Q9BW92 718 aaKnown RBP19.31■□□□□ 0.68
SHKBP1-223ENST00000600552 NUMBLQ9Y6R0 609 aa19.31■□□□□ 0.68
SHKBP1-223ENST00000600552 SLC16A4O15374 487 aa19.3■□□□□ 0.68
SHKBP1-223ENST00000600552 ST18O60284 1047 aa19.3■□□□□ 0.68
SHKBP1-223ENST00000600552 U2AF2P26368 475 aaKnown RBP eCLIP19.3■□□□□ 0.68
SHKBP1-223ENST00000600552 TKTP29401 623 aaKnown RBP19.3■□□□□ 0.68
SHKBP1-223ENST00000600552 ARPP19P56211 112 aa19.3■□□□□ 0.68
SHKBP1-223ENST00000600552 DMP1Q13316 513 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-223ENST00000600552 AXDND1Q5T1B0 1012 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-223ENST00000600552 DCLRE1AQ6PJP8 1040 aa19.3■□□□□ 0.68
SHKBP1-223ENST00000600552 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-223ENST00000600552 IGSF22Q8N9C0 903 aa19.3■□□□□ 0.68
SHKBP1-223ENST00000600552 GPR152Q8TDT2 470 aa19.3■□□□□ 0.68
SHKBP1-223ENST00000600552 PPP1R10Q96QC0 940 aaKnown RBP19.3■□□□□ 0.68
SHKBP1-223ENST00000600552 ACO2Q99798 780 aaKnown RBP19.3■□□□□ 0.68
SHKBP1-223ENST00000600552 RTP3Q9BQQ7 232 aa19.3■□□□□ 0.68
SHKBP1-223ENST00000600552 RHOBTB2Q9BYZ6 727 aa19.3■□□□□ 0.68
SHKBP1-223ENST00000600552 CDT1Q9H211 546 aa19.3■□□□□ 0.68
SHKBP1-223ENST00000600552 TNFSF13BQ9Y275 285 aa19.3■□□□□ 0.68
SHKBP1-223ENST00000600552 STK24Q9Y6E0 443 aa19.3■□□□□ 0.68
SHKBP1-223ENST00000600552 CDY1Q9Y6F8 540 aa19.3■□□□□ 0.68
SHKBP1-223ENST00000600552 VWA8A3KMH1 1905 aa19.29■□□□□ 0.68
SHKBP1-223ENST00000600552 SMIM28A0A1B0GU29 152 aa19.29■□□□□ 0.68
SHKBP1-223ENST00000600552 KRBA1A5PL33 1030 aa19.29■□□□□ 0.68
SHKBP1-223ENST00000600552 XYLBO75191 536 aa19.29■□□□□ 0.68
SHKBP1-223ENST00000600552 SRFP11831 508 aa19.29■□□□□ 0.68
SHKBP1-223ENST00000600552 RINT1Q6NUQ1 792 aa19.29■□□□□ 0.68
SHKBP1-223ENST00000600552 PDXDC1Q6P996 788 aa19.29■□□□□ 0.68
SHKBP1-223ENST00000600552 ASCL5Q7RTU5 278 aa19.29■□□□□ 0.68
SHKBP1-223ENST00000600552 KCNK18Q7Z418 384 aa19.29■□□□□ 0.68
SHKBP1-223ENST00000600552 DTWD2Q8NBA8 298 aa19.29■□□□□ 0.68
SHKBP1-223ENST00000600552 RPP25Q9BUL9 199 aaKnown RBP19.29■□□□□ 0.68
SHKBP1-223ENST00000600552 MRPL4Q9BYD3 311 aaKnown RBP19.29■□□□□ 0.68
SHKBP1-223ENST00000600552 TBC1D17Q9HA65 648 aa19.29■□□□□ 0.68
SHKBP1-223ENST00000600552 HCFC1R1Q9NWW0 138 aa19.29■□□□□ 0.68
SHKBP1-223ENST00000600552 WNT16Q9UBV4 365 aa19.29■□□□□ 0.68
SHKBP1-223ENST00000600552 PHLPP2Q6ZVD8 1323 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms