RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 HSDL1Q3SXM5 330 aa23.23■■□□□ 1.31
GRAMD1A-212ENST00000600231 ENOSF1Q7L5Y1 443 aa23.23■■□□□ 1.31
GRAMD1A-212ENST00000600231 MSTO1Q9BUK6 570 aa23.23■■□□□ 1.31
GRAMD1A-212ENST00000600231 RBAKQ9NYW8 714 aaPredicted RBP23.23■■□□□ 1.31
GRAMD1A-212ENST00000600231 A0A0B4J269 797 aa23.23■■□□□ 1.31
GRAMD1A-212ENST00000600231 MARK3P27448 753 aa23.23■■□□□ 1.31
GRAMD1A-212ENST00000600231 BIRC3Q13489 604 aa23.23■■□□□ 1.31
GRAMD1A-212ENST00000600231 SPOPLQ6IQ16 392 aa23.23■■□□□ 1.31
GRAMD1A-212ENST00000600231 ADAT2Q7Z6V5 191 aaKnown RBP23.23■■□□□ 1.31
GRAMD1A-212ENST00000600231 DDX42Q86XP3 938 aaKnown RBP eCLIP23.23■■□□□ 1.31
GRAMD1A-212ENST00000600231 SPON1Q9HCB6 807 aa23.23■■□□□ 1.31
GRAMD1A-212ENST00000600231 TRPC6Q9Y210 931 aa23.23■■□□□ 1.31
GRAMD1A-212ENST00000600231 MAFO75444 373 aaPredicted RBP23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 MTA2O94776 668 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 SLC25A27O95847 323 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 COMTP21964 271 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 SCP2P22307 547 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 MARCKSL1P49006 195 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 SEZ6Q53EL9 994 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 AADACL2Q6P093 401 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 TRIM50Q86XT4 487 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 PRPF31Q8WWY3 499 aaKnown RBP23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 ZNF653Q96CK0 615 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 BTBD6Q96KE9 485 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 NUP85Q9BW27 656 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 SLITRK6Q9H5Y7 841 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 TMEM134Q9H6X4 195 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 KCNH4Q9UQ05 1017 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 TTLL13PA6NNM8 815 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 ADCY3O60266 1144 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 VNN1O95497 513 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 CYP1A2P05177 515 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 ECHS1P30084 290 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 HLTFQ14527 1009 aaKnown RBP eCLIP23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 WDR44Q5JSH3 913 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 ALS2CLQ60I27 953 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 ZNF564Q8TBZ8 553 aaPredicted RBP23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 GLG1Q92896 1179 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 CELF4Q9BZC1 486 aaKnown RBP23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 AZI2Q9H6S1 392 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 GTF3C4Q9UKN8 822 aa23.22■■□□□ 1.31
GRAMD1A-212ENST00000600231 TTI1O43156 1089 aa23.21■■□□□ 1.31
GRAMD1A-212ENST00000600231 NF2P35240 595 aa23.21■■□□□ 1.31
GRAMD1A-212ENST00000600231 PIK3CAP42336 1068 aa23.21■■□□□ 1.31
GRAMD1A-212ENST00000600231 MOGSQ13724 837 aa23.21■■□□□ 1.31
GRAMD1A-212ENST00000600231 WHAMMQ8TF30 809 aa23.21■■□□□ 1.31
GRAMD1A-212ENST00000600231 MIF4GDA9UHW6 222 aaKnown RBP23.21■■□□□ 1.31
GRAMD1A-212ENST00000600231 BHMG1C9JSJ3 638 aaPredicted RBP23.21■■□□□ 1.31
GRAMD1A-212ENST00000600231 HSF2BPO75031 334 aa23.21■■□□□ 1.31
GRAMD1A-212ENST00000600231 LDHAP00338 332 aaKnown RBP23.21■■□□□ 1.31
GRAMD1A-212ENST00000600231 HARSP12081 509 aaKnown RBP23.21■■□□□ 1.31
GRAMD1A-212ENST00000600231 POU5F1Q01860 360 aaKnown RBP23.21■■□□□ 1.31
GRAMD1A-212ENST00000600231 ACAD10Q6JQN1 1059 aa23.21■■□□□ 1.31
GRAMD1A-212ENST00000600231 MAATS1Q7Z4T9 603 aa23.21■■□□□ 1.31
GRAMD1A-212ENST00000600231 ZIM3Q96PE6 472 aa23.21■■□□□ 1.31
GRAMD1A-212ENST00000600231 RPS6KC1Q96S38 1066 aa23.21■■□□□ 1.31
GRAMD1A-212ENST00000600231 SH3GL2Q99962 352 aa23.21■■□□□ 1.31
GRAMD1A-212ENST00000600231 ADGRA2Q96PE1 1338 aa23.21■■□□□ 1.31
GRAMD1A-212ENST00000600231 COPB2P35606 906 aa23.2■■□□□ 1.3
GRAMD1A-212ENST00000600231 C9orf131Q5VYM1 1079 aa23.2■■□□□ 1.3
GRAMD1A-212ENST00000600231 CPNE8Q86YQ8 564 aa23.2■■□□□ 1.3
GRAMD1A-212ENST00000600231 CCDC26Q8TAB7 109 aa23.2■■□□□ 1.3
GRAMD1A-212ENST00000600231 UPF1Q92900 1129 aaKnown RBP eCLIP23.2■■□□□ 1.3
GRAMD1A-212ENST00000600231 OPTNQ96CV9 577 aa23.2■■□□□ 1.3
GRAMD1A-212ENST00000600231 GPR20Q99678 358 aa23.2■■□□□ 1.3
GRAMD1A-212ENST00000600231 ZSWIM1Q9BR11 485 aa23.2■■□□□ 1.3
GRAMD1A-212ENST00000600231 ERVK-5Q9HDB9 667 aa23.2■■□□□ 1.3
GRAMD1A-212ENST00000600231 SIP14410 1827 aa23.2■■□□□ 1.3
GRAMD1A-212ENST00000600231 MCM3APO60318 1980 aa23.2■■□□□ 1.3
GRAMD1A-212ENST00000600231 PPIL2Q13356 520 aa23.2■■□□□ 1.3
GRAMD1A-212ENST00000600231 CUL1Q13616 776 aa23.2■■□□□ 1.3
GRAMD1A-212ENST00000600231 IQCKQ8N0W5 287 aa23.2■■□□□ 1.3
GRAMD1A-212ENST00000600231 UBL4BQ8N7F7 174 aa23.2■■□□□ 1.3
GRAMD1A-212ENST00000600231 FAM81BQ96LP2 452 aa23.2■■□□□ 1.3
GRAMD1A-212ENST00000600231 PEX5P50542 639 aa23.19■■□□□ 1.3
GRAMD1A-212ENST00000600231 CLEC16AQ2KHT3 1053 aa23.19■■□□□ 1.3
GRAMD1A-212ENST00000600231 WDR78Q5VTH9 848 aa23.19■■□□□ 1.3
GRAMD1A-212ENST00000600231 MREGQ8N565 214 aa23.19■■□□□ 1.3
GRAMD1A-212ENST00000600231 EIF1ADQ8N9N8 165 aaKnown RBP23.19■■□□□ 1.3
GRAMD1A-212ENST00000600231 NAP1L3Q99457 506 aaPredicted RBP23.19■■□□□ 1.3
GRAMD1A-212ENST00000600231 APOBEC3GQ9HC16 384 aaKnown RBP23.19■■□□□ 1.3
GRAMD1A-212ENST00000600231 CNTNAP2Q9UHC6 1331 aa23.19■■□□□ 1.3
GRAMD1A-212ENST00000600231 LRRC37A2A6NM11 1700 aa23.19■■□□□ 1.3
GRAMD1A-212ENST00000600231 DNAJC25-GNG10A0A024R161 153 aa23.19■■□□□ 1.3
GRAMD1A-212ENST00000600231 MKRN4PQ13434 485 aaPredicted RBP23.19■■□□□ 1.3
GRAMD1A-212ENST00000600231 KCTD2Q14681 263 aa23.19■■□□□ 1.3
GRAMD1A-212ENST00000600231 CELF3Q5SZQ8 465 aaKnown RBP23.19■■□□□ 1.3
GRAMD1A-212ENST00000600231 OR5B17Q8NGF7 314 aa23.19■■□□□ 1.3
GRAMD1A-212ENST00000600231 PCDHB2Q9Y5E7 798 aa23.19■■□□□ 1.3
GRAMD1A-212ENST00000600231 NOP56O00567 594 aaKnown RBP23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 CLDN3O15551 220 aa23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 UNGP13051 313 aaPredicted RBP23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 PTENP60484 403 aa23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 FBXO16Q8IX29 292 aaPredicted RBP23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 GOLGA6L1Q8N7Z2 621 aa23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 BBXQ8WY36 941 aaPredicted RBP23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.18■■□□□ 1.39e-10■■■■■ 79.8
GRAMD1A-212ENST00000600231 CD101Q93033 1021 aa23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 FAM167AQ96KS9 214 aa23.18■■□□□ 1.3
GRAMD1A-212ENST00000600231 RUFY1Q96T51 708 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms