RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 SMIM28A0A1B0GU29 152 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 BICDL2A1A5D9 508 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 TISP43B9A030 160 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 MAPK13O15264 365 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 LETM1O95202 739 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 MYOGP15173 224 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 GATMP50440 423 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 SCNN1GP51170 649 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 OSTNP61366 133 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 ENPEPQ07075 957 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 DSC1Q08554 894 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 TUSC3Q13454 348 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 ENOX2Q16206 610 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 PAN2Q504Q3 1202 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 ZCWPW2Q504Y3 356 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 ZNF697Q5TEC3 545 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 TMEM192Q8IY95 271 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 UROC1Q96N76 676 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 ZNF558Q96NG5 402 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 FAM213AQ9BRX8 229 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 C11orf84Q9BUA3 381 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 ZNF576Q9H609 170 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 CWH43Q9H720 699 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 C2CD2Q9Y426 696 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 CHD9Q3L8U1 2897 aa18.01■□□□□ 0.47
SHKBP1-219ENST00000599575 PTGESO14684 152 aa18■□□□□ 0.47
SHKBP1-219ENST00000599575 EXOC3O60645 756 aa18■□□□□ 0.47
SHKBP1-219ENST00000599575 POMCP01189 267 aa18■□□□□ 0.47
SHKBP1-219ENST00000599575 NR3C1P04150 777 aa18■□□□□ 0.47
SHKBP1-219ENST00000599575 ALDH2P05091 517 aa18■□□□□ 0.47
SHKBP1-219ENST00000599575 LINC00271P0C7V0 271 aa18■□□□□ 0.47
SHKBP1-219ENST00000599575 CXCL8P10145 99 aa18■□□□□ 0.47
SHKBP1-219ENST00000599575 CYP3A5P20815 502 aa18■□□□□ 0.47
SHKBP1-219ENST00000599575 PAX3P23760 479 aa18■□□□□ 0.47
SHKBP1-219ENST00000599575 CCNE1P24864 410 aa18■□□□□ 0.47
SHKBP1-219ENST00000599575 ACOT2P49753 483 aa18■□□□□ 0.47
SHKBP1-219ENST00000599575 SPOUT1Q5T280 376 aaKnown RBP18■□□□□ 0.47
SHKBP1-219ENST00000599575 CRELD2Q6UXH1 353 aaPredicted RBP18■□□□□ 0.47
SHKBP1-219ENST00000599575 LRRC55Q6ZSA7 311 aa18■□□□□ 0.47
SHKBP1-219ENST00000599575 USP37Q86T82 979 aa18■□□□□ 0.47
SHKBP1-219ENST00000599575 BRSK2Q8IWQ3 736 aa18■□□□□ 0.47
SHKBP1-219ENST00000599575 DDX27Q96GQ7 796 aaKnown RBP18■□□□□ 0.47
SHKBP1-219ENST00000599575 PPP1R10Q96QC0 940 aaKnown RBP18■□□□□ 0.47
SHKBP1-219ENST00000599575 IKZF4Q9H2S9 585 aa18■□□□□ 0.47
SHKBP1-219ENST00000599575 RBAKQ9NYW8 714 aaPredicted RBP18■□□□□ 0.47
SHKBP1-219ENST00000599575 KLK14Q9P0G3 267 aa18■□□□□ 0.47
SHKBP1-219ENST00000599575 MAPK8IP1Q9UQF2 711 aa18■□□□□ 0.47
SHKBP1-219ENST00000599575 PTPRSQ13332 1948 aa18■□□□□ 0.47
SHKBP1-219ENST00000599575 SOX1O00570 391 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-219ENST00000599575 BMP6P22004 513 aa17.99■□□□□ 0.47
SHKBP1-219ENST00000599575 RPL9P32969 192 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-219ENST00000599575 TNFSF9P41273 254 aa17.99■□□□□ 0.47
SHKBP1-219ENST00000599575 FKBP3Q00688 224 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-219ENST00000599575 UBE3AQ05086 875 aa17.99■□□□□ 0.47
SHKBP1-219ENST00000599575 SNRNP35Q16560 246 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-219ENST00000599575 EPC2Q52LR7 807 aa17.99■□□□□ 0.47
SHKBP1-219ENST00000599575 KCNT2Q6UVM3 1135 aa17.99■□□□□ 0.47
SHKBP1-219ENST00000599575 COLGALT2Q8IYK4 626 aa17.99■□□□□ 0.47
SHKBP1-219ENST00000599575 SMYD4Q8IYR2 804 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-219ENST00000599575 MKNK1Q9BUB5 465 aa17.99■□□□□ 0.47
SHKBP1-219ENST00000599575 PCIF1Q9H4Z3 704 aa17.99■□□□□ 0.47
SHKBP1-219ENST00000599575 NRDE2Q9H7Z3 1164 aa17.99■□□□□ 0.47
SHKBP1-219ENST00000599575 UBQLN1Q9UMX0 589 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-219ENST00000599575 FRMD4BQ9Y2L6 1034 aa17.99■□□□□ 0.47
SHKBP1-219ENST00000599575 PPP1R3GB7ZBB8 358 aa17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 RBAK-RBAKDNI3L0D1 243 aa17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 BIN1O00499 593 aa17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 CETN3O15182 167 aa17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 CLIC2O15247 247 aa17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 NR2F2P24468 414 aa17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 FXR1P51114 621 aaKnown RBP eCLIP17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 AFF1P51825 1210 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 BCAR1P56945 870 aa17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 PLCB3Q01970 1234 aa17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 KRT17Q04695 432 aa17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 NAB2Q15742 525 aa17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 ZBTB6Q15916 424 aa17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 SEZ6Q53EL9 994 aa17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 COLGALT1Q8NBJ5 622 aa17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 CACTINQ8WUQ7 758 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 SAAL1Q96ER3 474 aa17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 COLEC11Q9BWP8 271 aa17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 LMAN2LQ9H0V9 348 aa17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 SEMA6BQ9H3T3 888 aa17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 MIOSQ9NXC5 875 aa17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 SPG21Q9NZD8 308 aa17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 LZTS1Q9Y250 596 aa17.98■□□□□ 0.47
SHKBP1-219ENST00000599575 LACTBL1A8MY62 500 aa17.97■□□□□ 0.47
SHKBP1-219ENST00000599575 H3BNC9 293 aa17.97■□□□□ 0.47
SHKBP1-219ENST00000599575 ZC3H11AO75152 810 aaKnown RBP eCLIP17.97■□□□□ 0.47
SHKBP1-219ENST00000599575 DDHD2O94830 711 aa17.97■□□□□ 0.47
SHKBP1-219ENST00000599575 GALTP07902 379 aa17.97■□□□□ 0.47
SHKBP1-219ENST00000599575 ERCC5P28715 1186 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-219ENST00000599575 CTNNB1P35222 781 aa17.97■□□□□ 0.47
SHKBP1-219ENST00000599575 CYP2J2P51589 502 aa17.97■□□□□ 0.47
SHKBP1-219ENST00000599575 NLRP12P59046 1061 aa17.97■□□□□ 0.47
SHKBP1-219ENST00000599575 PAK1Q13153 545 aa17.97■□□□□ 0.47
SHKBP1-219ENST00000599575 ADAM9Q13443 819 aa17.97■□□□□ 0.47
SHKBP1-219ENST00000599575 ZBTB41Q5SVQ8 909 aa17.97■□□□□ 0.47
SHKBP1-219ENST00000599575 SASS6Q6UVJ0 657 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 220.4 ms