RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.58□□□□□ -0.24
SIN3B-204ENST00000594372 DPP7Q9UHL4 492 aa13.58□□□□□ -0.24
SIN3B-204ENST00000594372 SF3B1O75533 1304 aaKnown RBP eCLIP13.58□□□□□ -0.24
SIN3B-204ENST00000594372 KANSL1LA0AUZ9 987 aa13.57□□□□□ -0.24
SIN3B-204ENST00000594372 RECQL4O94761 1208 aa13.57□□□□□ -0.24
SIN3B-204ENST00000594372 PAPLNO95428 1278 aa13.57□□□□□ -0.24
SIN3B-204ENST00000594372 CTDNEP1O95476 244 aa13.57□□□□□ -0.24
SIN3B-204ENST00000594372 TARSP26639 723 aaKnown RBP13.57□□□□□ -0.24
SIN3B-204ENST00000594372 MXD4Q14582 209 aaPredicted RBP13.57□□□□□ -0.24
SIN3B-204ENST00000594372 LPAL2Q16609 132 aa13.57□□□□□ -0.24
SIN3B-204ENST00000594372 SLC5A9Q2M3M2 681 aa13.57□□□□□ -0.24
SIN3B-204ENST00000594372 LIN9Q5TKA1 542 aa13.57□□□□□ -0.24
SIN3B-204ENST00000594372 GALNT17Q6IS24 598 aa13.57□□□□□ -0.24
SIN3B-204ENST00000594372 ZC3H14Q6PJT7 736 aaKnown RBP13.57□□□□□ -0.24
SIN3B-204ENST00000594372 TPRG1Q6ZUI0 275 aa13.57□□□□□ -0.24
SIN3B-204ENST00000594372 IFNLR1Q8IU57 520 aaPredicted RBP13.57□□□□□ -0.24
SIN3B-204ENST00000594372 NPAS3Q8IXF0 933 aa13.57□□□□□ -0.24
SIN3B-204ENST00000594372 NXPE3Q969Y0 559 aa13.57□□□□□ -0.24
SIN3B-204ENST00000594372 MCRS1Q96EZ8 462 aa13.57□□□□□ -0.24
SIN3B-204ENST00000594372 ZNF274Q96GC6 653 aaPredicted RBP13.57□□□□□ -0.24
SIN3B-204ENST00000594372 CCDC43Q96MW1 224 aaKnown RBP13.57□□□□□ -0.24
SIN3B-204ENST00000594372 KIFC3Q9BVG8 833 aa13.57□□□□□ -0.24
SIN3B-204ENST00000594372 PDZD7Q9H5P4 517 aa13.57□□□□□ -0.24
SIN3B-204ENST00000594372 GOLGA2P5Q9HBQ8 144 aa13.57□□□□□ -0.24
SIN3B-204ENST00000594372 PDRG1Q9NUG6 133 aa13.57□□□□□ -0.24
SIN3B-204ENST00000594372 NCDNQ9UBB6 729 aa13.57□□□□□ -0.24
SIN3B-204ENST00000594372 DNMT3BQ9UBC3 853 aaKnown RBP13.57□□□□□ -0.24
SIN3B-204ENST00000594372 GDAQ9Y2T3 454 aa13.57□□□□□ -0.24
SIN3B-204ENST00000594372 CACNA1GO43497 2377 aa13.57□□□□□ -0.24
SIN3B-204ENST00000594372 A0A1B0GUA9 196 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 TBX3O15119 743 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 LAMTOR5O43504 91 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 KINO60870 393 aaKnown RBP13.56□□□□□ -0.24
SIN3B-204ENST00000594372 GCFC2P16383 781 aaKnown RBP13.56□□□□□ -0.24
SIN3B-204ENST00000594372 OR1D2P34982 312 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 TXKP42681 527 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 RARRES1P49788 294 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 NCBP1Q09161 790 aaKnown RBP13.56□□□□□ -0.24
SIN3B-204ENST00000594372 TUSC3Q13454 348 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 GRM2Q14416 872 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 PUM1Q14671 1186 aaKnown RBP eCLIP13.56□□□□□ -0.24
SIN3B-204ENST00000594372 NAB2Q15742 525 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 TMEM132AQ24JP5 1023 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 AXDND1Q5T1B0 1012 aaPredicted RBP13.56□□□□□ -0.24
SIN3B-204ENST00000594372 EXOC8Q8IYI6 725 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 HACE1Q8IYU2 909 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 TMEM130Q8N3G9 435 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 NECAB1Q8N987 351 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 PIK3R5Q8WYR1 880 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 HSD17B14Q9BPX1 270 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 BCO2Q9BYV7 579 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 SEMA4AQ9H3S1 761 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 LTB4R2Q9NPC1 389 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 HEBP1Q9NRV9 189 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 PPME1Q9Y570 386 aa13.56□□□□□ -0.24
SIN3B-204ENST00000594372 ZNF638Q14966 1978 aaKnown RBP13.56□□□□□ -0.24
SIN3B-204ENST00000594372 USP24Q9UPU5 2620 aa13.55□□□□□ -0.24
SIN3B-204ENST00000594372 DGAT1O75907 488 aa13.55□□□□□ -0.24
SIN3B-204ENST00000594372 LARGE1O95461 756 aa13.55□□□□□ -0.24
SIN3B-204ENST00000594372 CEBPBP17676 345 aa13.55□□□□□ -0.24
SIN3B-204ENST00000594372 ATP2B1P20020 1258 aa13.55□□□□□ -0.24
SIN3B-204ENST00000594372 TKTP29401 623 aaKnown RBP13.55□□□□□ -0.24
SIN3B-204ENST00000594372 BRCC3P46736 316 aa13.55□□□□□ -0.24
SIN3B-204ENST00000594372 CALCRLQ16602 461 aa13.55□□□□□ -0.24
SIN3B-204ENST00000594372 PABPC1LQ4VXU2 614 aaKnown RBP13.55□□□□□ -0.24
SIN3B-204ENST00000594372 VARS2Q5ST30 1063 aaKnown RBP13.55□□□□□ -0.24
SIN3B-204ENST00000594372 CPLX2Q6PUV4 134 aaKnown RBP13.55□□□□□ -0.24
SIN3B-204ENST00000594372 TNFRSF25Q93038 417 aa13.55□□□□□ -0.24
SIN3B-204ENST00000594372 TCEAL4Q96EI5 215 aa13.55□□□□□ -0.24
SIN3B-204ENST00000594372 DDX23Q9BUQ8 820 aaKnown RBP13.55□□□□□ -0.24
SIN3B-204ENST00000594372 TMEM60Q9H2L4 133 aa13.55□□□□□ -0.24
SIN3B-204ENST00000594372 DLL3Q9NYJ7 618 aa13.55□□□□□ -0.24
SIN3B-204ENST00000594372 TPCN1Q9ULQ1 816 aa13.55□□□□□ -0.24
SIN3B-204ENST00000594372 NDRG2Q9UN36 371 aaKnown RBP13.55□□□□□ -0.24
SIN3B-204ENST00000594372 SMG5Q9UPR3 1016 aaKnown RBP13.55□□□□□ -0.24
SIN3B-204ENST00000594372 CDY1Q9Y6F8 540 aa13.55□□□□□ -0.24
SIN3B-204ENST00000594372 DCDC2BA2VCK2 349 aa13.54□□□□□ -0.24
SIN3B-204ENST00000594372 SHISA7A6NL88 538 aa13.54□□□□□ -0.24
SIN3B-204ENST00000594372 MED24O75448 989 aa13.54□□□□□ -0.24
SIN3B-204ENST00000594372 BAG4O95429 457 aaKnown RBP13.54□□□□□ -0.24
SIN3B-204ENST00000594372 FDPSP14324 419 aaKnown RBP13.54□□□□□ -0.24
SIN3B-204ENST00000594372 CREMQ03060 361 aa13.54□□□□□ -0.24
SIN3B-204ENST00000594372 TANGO2Q6ICL3 276 aa13.54□□□□□ -0.24
SIN3B-204ENST00000594372 CD300LGQ6UXG3 332 aa13.54□□□□□ -0.24
SIN3B-204ENST00000594372 SLFN12Q8IYM2 578 aa13.54□□□□□ -0.24
SIN3B-204ENST00000594372 C3orf58Q8NDZ4 430 aa13.54□□□□□ -0.24
SIN3B-204ENST00000594372 SHDQ96IW2 340 aa13.54□□□□□ -0.24
SIN3B-204ENST00000594372 TTC12Q9H892 705 aaPredicted RBP13.54□□□□□ -0.24
SIN3B-204ENST00000594372 PARD6AQ9NPB6 346 aa13.54□□□□□ -0.24
SIN3B-204ENST00000594372 ANKEF1Q9NU02 776 aa13.54□□□□□ -0.24
SIN3B-204ENST00000594372 ORC3Q9UBD5 711 aaPredicted RBP13.54□□□□□ -0.24
SIN3B-204ENST00000594372 PCDHA12Q9UN75 941 aa13.54□□□□□ -0.24
SIN3B-204ENST00000594372 EML5Q05BV3 1969 aa13.53□□□□□ -0.24
SIN3B-204ENST00000594372 XYLBO75191 536 aa13.53□□□□□ -0.24
SIN3B-204ENST00000594372 REC8O95072 547 aa13.53□□□□□ -0.24
SIN3B-204ENST00000594372 PRKCBP05771 671 aa13.53□□□□□ -0.24
SIN3B-204ENST00000594372 THP07101 528 aa13.53□□□□□ -0.24
SIN3B-204ENST00000594372 HNRNPA1P09651 372 aaKnown RBP eCLIP13.53□□□□□ -0.24
SIN3B-204ENST00000594372 SPATA31C1P0DKV0 1188 aa13.53□□□□□ -0.24
SIN3B-204ENST00000594372 HOXC13P31276 330 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms