RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 KLHL5Q96PQ7 755 aa20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 CCDC94Q9BW85 323 aaPredicted RBP20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 MRPL17Q9NRX2 175 aaKnown RBP20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 TBX20Q9UMR3 447 aa20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 USP15Q9Y4E8 981 aaPredicted RBP20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 SMIM28A0A1B0GU29 152 aa20.24■□□□□ 0.83
SHKBP1-202ENST00000593764 C19orf67A6NJJ6 358 aa20.24■□□□□ 0.83
SHKBP1-202ENST00000593764 C2CD2LO14523 706 aa20.24■□□□□ 0.83
SHKBP1-202ENST00000593764 SRGAP2BP0DMP2 458 aa20.24■□□□□ 0.83
SHKBP1-202ENST00000593764 HOXB8P17481 243 aaPredicted RBP20.24■□□□□ 0.83
SHKBP1-202ENST00000593764 SCP2P22307 547 aa20.24■□□□□ 0.83
SHKBP1-202ENST00000593764 IGFBP6P24592 240 aaPredicted RBP20.24■□□□□ 0.83
SHKBP1-202ENST00000593764 NMT1P30419 496 aaKnown RBP20.24■□□□□ 0.83
SHKBP1-202ENST00000593764 GTF2BQ00403 316 aa20.24■□□□□ 0.83
SHKBP1-202ENST00000593764 DSG1Q02413 1049 aa20.24■□□□□ 0.83
SHKBP1-202ENST00000593764 NOLC1Q14978 699 aaKnown RBP eCLIP20.24■□□□□ 0.83
SHKBP1-202ENST00000593764 AXDND1Q5T1B0 1012 aaPredicted RBP20.24■□□□□ 0.83
SHKBP1-202ENST00000593764 SV2BQ7L1I2 683 aa20.24■□□□□ 0.83
SHKBP1-202ENST00000593764 CASP10Q92851 521 aa20.24■□□□□ 0.83
SHKBP1-202ENST00000593764 ZMAT2Q96NC0 199 aaKnown RBP20.24■□□□□ 0.83
SHKBP1-202ENST00000593764 ACAP3Q96P50 834 aa20.24■□□□□ 0.83
SHKBP1-202ENST00000593764 ZHX3Q9H4I2 956 aa20.24■□□□□ 0.83
SHKBP1-202ENST00000593764 ANKFY1Q9P2R3 1169 aa20.24■□□□□ 0.83
SHKBP1-202ENST00000593764 K7ENM7 598 aa20.23■□□□□ 0.83
SHKBP1-202ENST00000593764 CLDN3O15551 220 aa20.23■□□□□ 0.83
SHKBP1-202ENST00000593764 TBCAO75347 108 aaKnown RBP20.23■□□□□ 0.83
SHKBP1-202ENST00000593764 TADA2AO75478 443 aa20.23■□□□□ 0.83
SHKBP1-202ENST00000593764 KIF4AO95239 1232 aa20.23■□□□□ 0.83
SHKBP1-202ENST00000593764 PIGRP01833 764 aa20.23■□□□□ 0.83
SHKBP1-202ENST00000593764 URODP06132 367 aa20.23■□□□□ 0.83
SHKBP1-202ENST00000593764 HARSP12081 509 aaKnown RBP20.23■□□□□ 0.83
SHKBP1-202ENST00000593764 EPCAMP16422 314 aa20.23■□□□□ 0.83
SHKBP1-202ENST00000593764 YARSP54577 528 aaKnown RBP20.23■□□□□ 0.83
SHKBP1-202ENST00000593764 SEZ6Q53EL9 994 aa20.23■□□□□ 0.83
SHKBP1-202ENST00000593764 TMEM87AQ8NBN3 555 aa20.23■□□□□ 0.83
SHKBP1-202ENST00000593764 B3GALT6Q96L58 329 aa20.23■□□□□ 0.83
SHKBP1-202ENST00000593764 SNX27Q96L92 541 aa20.23■□□□□ 0.83
SHKBP1-202ENST00000593764 EMILIN2Q9BXX0 1053 aa20.23■□□□□ 0.83
SHKBP1-202ENST00000593764 RXFP1Q9HBX9 757 aa20.23■□□□□ 0.83
SHKBP1-202ENST00000593764 TOPORSQ9NS56 1045 aaPredicted RBP20.23■□□□□ 0.83
SHKBP1-202ENST00000593764 ZDHHC9Q9Y397 364 aa20.23■□□□□ 0.83
SHKBP1-202ENST00000593764 CUTAO60888 179 aa20.22■□□□□ 0.83
SHKBP1-202ENST00000593764 KCNE1P15382 129 aa20.22■□□□□ 0.83
SHKBP1-202ENST00000593764 STAT6P42226 847 aa20.22■□□□□ 0.83
SHKBP1-202ENST00000593764 GLUD2P49448 558 aa20.22■□□□□ 0.83
SHKBP1-202ENST00000593764 CLCN4P51793 760 aa20.22■□□□□ 0.83
SHKBP1-202ENST00000593764 SOX4Q06945 474 aaPredicted RBP20.22■□□□□ 0.83
SHKBP1-202ENST00000593764 SLC10A6Q3KNW5 377 aa20.22■□□□□ 0.83
SHKBP1-202ENST00000593764 USP41Q3LFD5 358 aa20.22■□□□□ 0.83
SHKBP1-202ENST00000593764 ZC2HC1CQ53FD0 456 aaPredicted RBP20.22■□□□□ 0.83
SHKBP1-202ENST00000593764 ATL3Q6DD88 541 aa20.22■□□□□ 0.83
SHKBP1-202ENST00000593764 SLC39A4Q6P5W5 647 aa20.22■□□□□ 0.83
SHKBP1-202ENST00000593764 SHC4Q6S5L8 630 aa20.22■□□□□ 0.83
SHKBP1-202ENST00000593764 CD300LGQ6UXG3 332 aa20.22■□□□□ 0.83
SHKBP1-202ENST00000593764 PDILTQ8N807 584 aa20.22■□□□□ 0.83
SHKBP1-202ENST00000593764 HASPINQ8TF76 798 aa20.22■□□□□ 0.83
SHKBP1-202ENST00000593764 APOL5Q9BWW9 433 aa20.22■□□□□ 0.83
SHKBP1-202ENST00000593764 ST6GALNAC4Q9H4F1 302 aa20.22■□□□□ 0.83
SHKBP1-202ENST00000593764 CNTN3Q9P232 1028 aa20.22■□□□□ 0.83
SHKBP1-202ENST00000593764 SSX2IPQ9Y2D8 614 aa20.22■□□□□ 0.83
SHKBP1-202ENST00000593764 TEX28O15482 410 aa20.21■□□□□ 0.83
SHKBP1-202ENST00000593764 FAM189A1O60320 539 aa20.21■□□□□ 0.83
SHKBP1-202ENST00000593764 KLRC2P26717 231 aa20.21■□□□□ 0.83
SHKBP1-202ENST00000593764 DNM1Q05193 864 aaKnown RBP20.21■□□□□ 0.83
SHKBP1-202ENST00000593764 E2F4Q16254 413 aa20.21■□□□□ 0.83
SHKBP1-202ENST00000593764 UPP1Q16831 310 aa20.21■□□□□ 0.83
SHKBP1-202ENST00000593764 ZNF720Q7Z2F6 126 aa20.21■□□□□ 0.83
SHKBP1-202ENST00000593764 PPFIBP1Q86W92 1011 aa20.21■□□□□ 0.83
SHKBP1-202ENST00000593764 SFR1Q86XK3 245 aa20.21■□□□□ 0.83
SHKBP1-202ENST00000593764 MAP4K3Q8IVH8 894 aa20.21■□□□□ 0.83
SHKBP1-202ENST00000593764 GPR65Q8IYL9 337 aa20.21■□□□□ 0.83
SHKBP1-202ENST00000593764 BICD1Q96G01 975 aa20.21■□□□□ 0.83
SHKBP1-202ENST00000593764 STRA6Q9BX79 667 aa20.21■□□□□ 0.83
SHKBP1-202ENST00000593764 GOLGA2P5Q9HBQ8 144 aa20.21■□□□□ 0.83
SHKBP1-202ENST00000593764 CDH22Q9UJ99 828 aa20.21■□□□□ 0.83
SHKBP1-202ENST00000593764 TMEM189-UBE2V1I3L0A0 370 aa20.2■□□□□ 0.82
SHKBP1-202ENST00000593764 HNRNPDLO14979 420 aaKnown RBP20.2■□□□□ 0.82
SHKBP1-202ENST00000593764 SSTR3P32745 418 aaPredicted RBP20.2■□□□□ 0.82
SHKBP1-202ENST00000593764 LIG4P49917 911 aa20.2■□□□□ 0.82
SHKBP1-202ENST00000593764 CLCNKBP51801 687 aa20.2■□□□□ 0.82
SHKBP1-202ENST00000593764 TPRNQ4KMQ1 711 aa20.2■□□□□ 0.82
SHKBP1-202ENST00000593764 KIAA1841Q6NSI8 718 aa20.2■□□□□ 0.82
SHKBP1-202ENST00000593764 KANK3Q6NY19 840 aa20.2■□□□□ 0.82
SHKBP1-202ENST00000593764 DCLRE1AQ6PJP8 1040 aa20.2■□□□□ 0.82
SHKBP1-202ENST00000593764 C12orf76Q8N812 135 aaPredicted RBP20.2■□□□□ 0.82
SHKBP1-202ENST00000593764 FEZF2Q8TBJ5 459 aa20.2■□□□□ 0.82
SHKBP1-202ENST00000593764 KCNG4Q8TDN1 519 aa20.2■□□□□ 0.82
SHKBP1-202ENST00000593764 ADAM7Q9H2U9 754 aa20.2■□□□□ 0.82
SHKBP1-202ENST00000593764 RCOR1Q9UKL0 485 aa20.2■□□□□ 0.82
SHKBP1-202ENST00000593764 PCDHA7Q9UN72 937 aa20.2■□□□□ 0.82
SHKBP1-202ENST00000593764 CITO14578 2027 aa20.2■□□□□ 0.82
SHKBP1-202ENST00000593764 SF3B1O75533 1304 aaKnown RBP eCLIP20.2■□□□□ 0.826e-8■■■■■ 80.2
SHKBP1-202ENST00000593764 A0A0B4J269 797 aa20.19■□□□□ 0.82
SHKBP1-202ENST00000593764 FRMD3A2A2Y4 597 aa20.19■□□□□ 0.82
SHKBP1-202ENST00000593764 ANKRD63C9JTQ0 380 aa20.19■□□□□ 0.82
SHKBP1-202ENST00000593764 PPP1R37O75864 691 aa20.19■□□□□ 0.82
SHKBP1-202ENST00000593764 CLTAP09496 248 aa20.19■□□□□ 0.82
SHKBP1-202ENST00000593764 TNFSF9P41273 254 aa20.19■□□□□ 0.82
SHKBP1-202ENST00000593764 CBX2Q14781 532 aaPredicted RBP20.19■□□□□ 0.82
SHKBP1-202ENST00000593764 RTP2Q5QGT7 225 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms