RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 ALG13Q9NP73 1137 aaKnown RBP10.52□□□□□ -0.73
DDX39A-220ENST00000593008 TOPORSQ9NS56 1045 aaPredicted RBP10.52□□□□□ -0.73
DDX39A-220ENST00000593008 SAMSN1Q9NSI8 373 aaKnown RBP10.52□□□□□ -0.73
DDX39A-220ENST00000593008 TMEM161AQ9NX61 479 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 SNTG2Q9NY99 539 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 KLK14Q9P0G3 267 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 IPPQ9Y573 584 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 PTPRJQ12913 1337 aa10.52□□□□□ -0.73
DDX39A-220ENST00000593008 COL4A4P53420 1690 aaPredicted RBP10.51□□□□□ -0.73
DDX39A-220ENST00000593008 A0A0U1RQF3 1178 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 H0YCG3 227 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 N4BP3O15049 544 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 GRM6O15303 877 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 B4GALT3O60512 393 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 TOM1L1O75674 476 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 AKAP3O75969 853 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 CXCL8P10145 99 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 NR2F2P24468 414 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 GUCY2FP51841 1108 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 TFF2Q03403 129 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 MCL1Q07820 350 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 IQCB1Q15051 598 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 ENOX2Q16206 610 aaKnown RBP10.51□□□□□ -0.73
DDX39A-220ENST00000593008 GLRA4Q5JXX5 417 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 CLLU1OSQ5K130 101 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 NOTUMQ6P988 496 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 SLC27A1Q6PCB7 646 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 STXBP4Q6ZWJ1 553 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 IRF2BP1Q8IU81 584 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 ABI1Q8IZP0 508 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 RDH13Q8NBN7 331 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 HELQQ8TDG4 1101 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 DHTKD1Q96HY7 919 aaPredicted RBP10.51□□□□□ -0.73
DDX39A-220ENST00000593008 ZFP42Q96MM3 310 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 TCHPQ9BT92 498 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 C11orf84Q9BUA3 381 aaPredicted RBP10.51□□□□□ -0.73
DDX39A-220ENST00000593008 TSPY26PQ9H489 355 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 ELAC1Q9H777 363 aaKnown RBP10.51□□□□□ -0.73
DDX39A-220ENST00000593008 TMEM206Q9H813 350 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 CHST12Q9NRB3 414 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 FAM105AQ9NUU6 356 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 CACNG4Q9UBN1 327 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 RWDD2AQ9UIY3 292 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 AGO2Q9UKV8 859 aaKnown RBP10.51□□□□□ -0.73
DDX39A-220ENST00000593008 PLAGL2Q9UPG8 496 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 EXOC7Q9UPT5 735 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 TRAF3IP3Q9Y228 551 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 PCDHB2Q9Y5E7 798 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 STYXL1Q9Y6J8 313 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 CUL9Q8IWT3 2517 aa10.51□□□□□ -0.73
DDX39A-220ENST00000593008 C5orf67F2Z3F1 127 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 PDXKO00764 312 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 CLDN3O15551 220 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 RECQL4O94761 1208 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 TRIM49P0CI25 452 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 TRIM49CP0CI26 452 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 MCF2P10911 925 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 ATP1A3P13637 1013 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 PBX3P40426 434 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 DLG4P78352 724 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 STIM1Q13586 685 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 PTPN21Q16825 1174 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 PTPROQ16827 1216 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 CEP135Q66GS9 1140 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 HS2ST1Q7LGA3 356 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 ZNF598Q86UK7 904 aaKnown RBP10.5□□□□□ -0.73
DDX39A-220ENST00000593008 ZC3H3Q8IXZ2 948 aaKnown RBP10.5□□□□□ -0.73
DDX39A-220ENST00000593008 KLHL23Q8NBE8 558 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 ELMO3Q96BJ8 720 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 MRPL38Q96DV4 380 aaKnown RBP10.5□□□□□ -0.73
DDX39A-220ENST00000593008 CASD1Q96PB1 797 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 RBSNQ9H1K0 784 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 DMAC2Q9NW81 257 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 RNF216Q9NWF9 866 aaPredicted RBP10.5□□□□□ -0.73
DDX39A-220ENST00000593008 THEGQ9P2T0 379 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 INPP5FQ9Y2H2 1132 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 RWDD3Q9Y3V2 267 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 NFE2L3Q9Y4A8 694 aa10.5□□□□□ -0.73
DDX39A-220ENST00000593008 SPTBN5Q9NRC6 3674 aaKnown RBP10.49□□□□□ -0.73
DDX39A-220ENST00000593008 CALUO43852 315 aaPredicted RBP10.49□□□□□ -0.73
DDX39A-220ENST00000593008 EXOC3O60645 756 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 LETM1O95202 739 aaPredicted RBP10.49□□□□□ -0.73
DDX39A-220ENST00000593008 ITGB1P05556 798 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 RB1P06400 928 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 NFICP08651 508 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 IGFBP6P24592 240 aaPredicted RBP10.49□□□□□ -0.73
DDX39A-220ENST00000593008 DNAJB1P25685 340 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 MLH1P40692 756 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 ZNF165P49910 485 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 TCEAL5Q5H9L2 206 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 C1orf220Q5T0J3 134 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 AGMOQ6ZNB7 445 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 EP400NLQ6ZTU2 488 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 EFCAB13Q8IY85 973 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 CSGALNACT2Q8N6G5 542 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 FAM212AQ96EL1 285 aa10.49□□□□□ -0.73
DDX39A-220ENST00000593008 CNOT6LQ96LI5 555 aaKnown RBP10.49□□□□□ -0.73
DDX39A-220ENST00000593008 ZMAT2Q96NC0 199 aaKnown RBP10.49□□□□□ -0.73
DDX39A-220ENST00000593008 POP1Q99575 1024 aaKnown RBP10.49□□□□□ -0.73
DDX39A-220ENST00000593008 TSG101Q99816 390 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms