RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 MTMR1Q13613 665 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 UGCGQ16739 394 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.42□□□□□ -0.42
ZNF540-210ENST00000592533 MAEAQ7L5Y9 396 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 FAM83AQ86UY5 434 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 CPNE8Q86YQ8 564 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 RDM1Q8NG50 284 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 MYBL1P10243 752 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 UNGP13051 313 aaPredicted RBP12.42□□□□□ -0.42
ZNF540-210ENST00000592533 SLC1A1P43005 524 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 PEX3P56589 373 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 USP37Q86T82 979 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 ZNF677Q86XU0 584 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 PARP9Q8IXQ6 854 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 LRRC34Q8IZ02 419 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 MTMR14Q8NCE2 650 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 BTBD6Q96KE9 485 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 NSRP1Q9H0G5 558 aaKnown RBP12.42□□□□□ -0.42
ZNF540-210ENST00000592533 CDC42EP4Q9H3Q1 356 aaKnown RBP12.42□□□□□ -0.42
ZNF540-210ENST00000592533 MGRN1O60291 552 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 CYP24A1Q07973 514 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 WLSQ5T9L3 541 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 SYTL5Q8TDW5 730 aaPredicted RBP12.42□□□□□ -0.42
ZNF540-210ENST00000592533 ZKSCAN4Q969J2 545 aaPredicted RBP12.42□□□□□ -0.42
ZNF540-210ENST00000592533 TRIM11Q96F44 468 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 NCAPGQ9BPX3 1015 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 SENP7Q9BQF6 1050 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 ACP6Q9NPH0 428 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 RAB20Q9NX57 234 aa12.42□□□□□ -0.42
ZNF540-210ENST00000592533 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.42□□□□□ -0.42
ZNF540-210ENST00000592533 CHORDC1Q9UHD1 332 aaPredicted RBP12.42□□□□□ -0.42
ZNF540-210ENST00000592533 TLDC2A0PJX2 215 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 CNGA1P29973 690 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 NPTX2P47972 431 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 KRT76Q01546 638 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 KRT17Q04695 432 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 NBPF9Q3BBW0 867 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 SLC39A4Q6P5W5 647 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 C15orf39Q6ZRI6 1047 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 EXOC3L1Q86VI1 746 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 RELL1Q8IUW5 271 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 GRK7Q8WTQ7 553 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 DHX38Q92620 1227 aaKnown RBP12.41□□□□□ -0.42
ZNF540-210ENST00000592533 KCNN1Q92952 543 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 SNF8Q96H20 258 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 PRMT1Q99873 361 aaKnown RBP12.41□□□□□ -0.42
ZNF540-210ENST00000592533 HOMER3Q9NSC5 361 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 GEMIN8Q9NWZ8 242 aaKnown RBP12.41□□□□□ -0.42
ZNF540-210ENST00000592533 NEU2Q9Y3R4 380 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 WDR64B1ANS9 1081 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 ASNSP08243 561 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 ATP5DP30049 168 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 CLDN10P78369 228 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 SNCBQ16143 134 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 PREPLQ4J6C6 727 aaPredicted RBP12.41□□□□□ -0.42
ZNF540-210ENST00000592533 SGO2Q562F6 1265 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 TAS1R2Q8TE23 839 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 GLIS2Q9BZE0 524 aaPredicted RBP12.41□□□□□ -0.42
ZNF540-210ENST00000592533 GPRC5CQ9NQ84 441 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 HAUS2Q9NVX0 235 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 SAMD15Q9P1V8 674 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 PTPN22Q9Y2R2 807 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 MROH7Q68CQ1 1323 aa12.41□□□□□ -0.42
ZNF540-210ENST00000592533 CLRN2A0PK11 232 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 GOLGA8IPA6NC78 632 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 GOLGA8JA6NMD2 632 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 WDR46O15213 610 aaKnown RBP12.4□□□□□ -0.42
ZNF540-210ENST00000592533 CLDN3O15551 220 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 SORBS3O60504 671 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 DLATP10515 647 aaKnown RBP12.4□□□□□ -0.42
ZNF540-210ENST00000592533 KCNJ1P48048 391 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 RTP1P59025 263 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 CENPCQ03188 943 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 DMP1Q13316 513 aaPredicted RBP12.4□□□□□ -0.42
ZNF540-210ENST00000592533 PGM5Q15124 567 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 DLGAP5Q15398 846 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 PPP1R7Q15435 360 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 LPAR1Q92633 364 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 PKD2L1Q9P0L9 805 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 LGALS13Q9UHV8 139 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 RLFQ13129 1914 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 LOC285556D6RIA3 1793 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 COL11A1P12107 1806 aaPredicted RBP12.4□□□□□ -0.42
ZNF540-210ENST00000592533 TTC4O95801 387 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 CCNE2O96020 404 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 GARTP22102 1010 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 MCOLN2Q8IZK6 566 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 DDX27Q96GQ7 796 aaKnown RBP12.4□□□□□ -0.42
ZNF540-210ENST00000592533 QTRT2Q9H974 415 aaKnown RBP12.4□□□□□ -0.42
ZNF540-210ENST00000592533 SLC38A10Q9HBR0 1119 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.4□□□□□ -0.42
ZNF540-210ENST00000592533 DOCK5Q9H7D0 1870 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 MYH9P35579 1960 aaKnown RBP12.4□□□□□ -0.42
ZNF540-210ENST00000592533 COL4A5P29400 1685 aa12.4□□□□□ -0.42
ZNF540-210ENST00000592533 SNX3O60493 162 aa12.4□□□□□ -0.43
ZNF540-210ENST00000592533 PPARDQ03181 441 aa12.4□□□□□ -0.43
ZNF540-210ENST00000592533 KLF1Q13351 362 aaPredicted RBP12.4□□□□□ -0.43
ZNF540-210ENST00000592533 ZYXQ15942 572 aaKnown RBP12.4□□□□□ -0.43
ZNF540-210ENST00000592533 XRRA1Q6P2D8 792 aa12.4□□□□□ -0.43
ZNF540-210ENST00000592533 SV2AQ7L0J3 742 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms