RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 ANKFY1Q9P2R3 1169 aa29.82■■■□□ 2.36
SMAD4-213ENST00000591914 TBX20Q9UMR3 447 aa29.82■■■□□ 2.36
SMAD4-213ENST00000591914 SSX2IPQ9Y2D8 614 aa29.82■■■□□ 2.36
SMAD4-213ENST00000591914 TRIP11Q15643 1979 aa29.81■■■□□ 2.36
SMAD4-213ENST00000591914 CNPP09543 421 aaKnown RBP29.81■■■□□ 2.36
SMAD4-213ENST00000591914 STAT6P42226 847 aa29.81■■■□□ 2.36
SMAD4-213ENST00000591914 GLUD2P49448 558 aa29.81■■■□□ 2.36
SMAD4-213ENST00000591914 MCL1Q07820 350 aa29.81■■■□□ 2.36
SMAD4-213ENST00000591914 GLRA4Q5JXX5 417 aa29.81■■■□□ 2.36
SMAD4-213ENST00000591914 KIAA0319Q5VV43 1072 aa29.81■■■□□ 2.36
SMAD4-213ENST00000591914 SV2BQ7L1I2 683 aa29.81■■■□□ 2.36
SMAD4-213ENST00000591914 DDX12PQ92771 950 aa29.81■■■□□ 2.36
SMAD4-213ENST00000591914 KLHL5Q96PQ7 755 aa29.81■■■□□ 2.36
SMAD4-213ENST00000591914 SMIM28A0A1B0GU29 152 aa29.8■■■□□ 2.36
SMAD4-213ENST00000591914 MYMKA6NI61 221 aa29.8■■■□□ 2.36
SMAD4-213ENST00000591914 C19orf67A6NJJ6 358 aa29.8■■■□□ 2.36
SMAD4-213ENST00000591914 CLDN3O15551 220 aa29.8■■■□□ 2.36
SMAD4-213ENST00000591914 PIGRP01833 764 aa29.8■■■□□ 2.36
SMAD4-213ENST00000591914 ABCD1P33897 745 aa29.8■■■□□ 2.36
SMAD4-213ENST00000591914 DSG1Q02413 1049 aa29.8■■■□□ 2.36
SMAD4-213ENST00000591914 ATL3Q6DD88 541 aa29.8■■■□□ 2.36
SMAD4-213ENST00000591914 DYMQ7RTS9 669 aa29.8■■■□□ 2.36
SMAD4-213ENST00000591914 PPFIBP1Q86W92 1011 aa29.8■■■□□ 2.36
SMAD4-213ENST00000591914 SUSD6Q92537 303 aa29.8■■■□□ 2.36
SMAD4-213ENST00000591914 SNX27Q96L92 541 aa29.8■■■□□ 2.36
SMAD4-213ENST00000591914 ACAP3Q96P50 834 aa29.8■■■□□ 2.36
SMAD4-213ENST00000591914 PANK2Q9BZ23 570 aa29.8■■■□□ 2.36
SMAD4-213ENST00000591914 SF3B1O75533 1304 aaKnown RBP eCLIP29.79■■■□□ 2.363e-6■■■■■ 137.9
SMAD4-213ENST00000591914 C2CD2LO14523 706 aa29.79■■■□□ 2.36
SMAD4-213ENST00000591914 CUTAO60888 179 aa29.79■■■□□ 2.36
SMAD4-213ENST00000591914 TADA2AO75478 443 aa29.79■■■□□ 2.36
SMAD4-213ENST00000591914 KIF4AO95239 1232 aa29.79■■■□□ 2.36
SMAD4-213ENST00000591914 HARSP12081 509 aaKnown RBP29.79■■■□□ 2.36
SMAD4-213ENST00000591914 GTF2BQ00403 316 aa29.79■■■□□ 2.36
SMAD4-213ENST00000591914 FOXD4L6Q3SYB3 417 aaPredicted RBP29.79■■■□□ 2.36
SMAD4-213ENST00000591914 FOXD4L3Q6VB84 417 aaPredicted RBP29.79■■■□□ 2.36
SMAD4-213ENST00000591914 GPR65Q8IYL9 337 aa29.79■■■□□ 2.36
SMAD4-213ENST00000591914 DNAJC19Q96DA6 116 aa29.79■■■□□ 2.36
SMAD4-213ENST00000591914 BICD1Q96G01 975 aa29.79■■■□□ 2.36
SMAD4-213ENST00000591914 HAPLN2Q9GZV7 340 aa29.79■■■□□ 2.36
SMAD4-213ENST00000591914 ST6GALNAC4Q9H4F1 302 aa29.79■■■□□ 2.36
SMAD4-213ENST00000591914 CITO14578 2027 aa29.78■■■□□ 2.36
SMAD4-213ENST00000591914 MEFVO15553 781 aaPredicted RBP29.78■■■□□ 2.36
SMAD4-213ENST00000591914 EPCAMP16422 314 aa29.78■■■□□ 2.36
SMAD4-213ENST00000591914 NMT1P30419 496 aaKnown RBP29.78■■■□□ 2.36
SMAD4-213ENST00000591914 USP41Q3LFD5 358 aa29.78■■■□□ 2.36
SMAD4-213ENST00000591914 TPRNQ4KMQ1 711 aa29.78■■■□□ 2.36
SMAD4-213ENST00000591914 KCNG4Q8TDN1 519 aa29.78■■■□□ 2.36
SMAD4-213ENST00000591914 POP1Q99575 1024 aaKnown RBP29.78■■■□□ 2.36
SMAD4-213ENST00000591914 RXFP1Q9HBX9 757 aa29.78■■■□□ 2.36
SMAD4-213ENST00000591914 DZANK1Q9NVP4 752 aa29.78■■■□□ 2.36
SMAD4-213ENST00000591914 CNTN3Q9P232 1028 aa29.78■■■□□ 2.36
SMAD4-213ENST00000591914 HNRNPDLO14979 420 aaKnown RBP29.77■■■□□ 2.36
SMAD4-213ENST00000591914 KCNE1P15382 129 aa29.77■■■□□ 2.36
SMAD4-213ENST00000591914 KLRC2P26717 231 aa29.77■■■□□ 2.36
SMAD4-213ENST00000591914 SSTR3P32745 418 aaPredicted RBP29.77■■■□□ 2.36
SMAD4-213ENST00000591914 LIG4P49917 911 aa29.77■■■□□ 2.36
SMAD4-213ENST00000591914 CLCN4P51793 760 aa29.77■■■□□ 2.36
SMAD4-213ENST00000591914 AXDND1Q5T1B0 1012 aaPredicted RBP29.77■■■□□ 2.36
SMAD4-213ENST00000591914 KIAA1841Q6NSI8 718 aa29.77■■■□□ 2.36
SMAD4-213ENST00000591914 SFR1Q86XK3 245 aa29.77■■■□□ 2.36
SMAD4-213ENST00000591914 MAP4K3Q8IVH8 894 aa29.77■■■□□ 2.36
SMAD4-213ENST00000591914 PDILTQ8N807 584 aa29.77■■■□□ 2.36
SMAD4-213ENST00000591914 HASPINQ8TF76 798 aa29.77■■■□□ 2.36
SMAD4-213ENST00000591914 B3GALT6Q96L58 329 aa29.77■■■□□ 2.36
SMAD4-213ENST00000591914 UROC1Q96N76 676 aa29.77■■■□□ 2.36
SMAD4-213ENST00000591914 ZMAT2Q96NC0 199 aaKnown RBP29.77■■■□□ 2.36
SMAD4-213ENST00000591914 SEL1LQ9UBV2 794 aa29.77■■■□□ 2.36
SMAD4-213ENST00000591914 TMEM189-UBE2V1I3L0A0 370 aa29.76■■■□□ 2.35
SMAD4-213ENST00000591914 E2F4Q16254 413 aa29.76■■■□□ 2.35
SMAD4-213ENST00000591914 SEZ6Q53EL9 994 aa29.76■■■□□ 2.35
SMAD4-213ENST00000591914 SHC4Q6S5L8 630 aa29.76■■■□□ 2.35
SMAD4-213ENST00000591914 SLC38A7Q9NVC3 462 aa29.76■■■□□ 2.35
SMAD4-213ENST00000591914 CFAP45Q9UL16 551 aa29.76■■■□□ 2.35
SMAD4-213ENST00000591914 TEX28O15482 410 aa29.75■■■□□ 2.35
SMAD4-213ENST00000591914 GAP43P17677 238 aa29.75■■■□□ 2.35
SMAD4-213ENST00000591914 SOX4Q06945 474 aaPredicted RBP29.75■■■□□ 2.35
SMAD4-213ENST00000591914 UPP1Q16831 310 aa29.75■■■□□ 2.35
SMAD4-213ENST00000591914 SLC10A6Q3KNW5 377 aa29.75■■■□□ 2.35
SMAD4-213ENST00000591914 ZC2HC1CQ53FD0 456 aaPredicted RBP29.75■■■□□ 2.35
SMAD4-213ENST00000591914 ZNF720Q7Z2F6 126 aa29.75■■■□□ 2.35
SMAD4-213ENST00000591914 KHSRPQ92945 711 aaKnown RBP eCLIP29.75■■■□□ 2.359e-7■■□□□ 13.8
SMAD4-213ENST00000591914 APOL5Q9BWW9 433 aa29.75■■■□□ 2.35
SMAD4-213ENST00000591914 FAM189A1O60320 539 aa29.74■■■□□ 2.35
SMAD4-213ENST00000591914 ADH1AP07327 375 aa29.74■■■□□ 2.35
SMAD4-213ENST00000591914 CLTAP09496 248 aa29.74■■■□□ 2.35
SMAD4-213ENST00000591914 MATR3P43243 847 aaKnown RBP eCLIP29.74■■■□□ 2.356e-9■■□□□ 12.9
SMAD4-213ENST00000591914 CLCNKBP51801 687 aa29.74■■■□□ 2.35
SMAD4-213ENST00000591914 DNM1Q05193 864 aaKnown RBP29.74■■■□□ 2.35
SMAD4-213ENST00000591914 ITIH3Q06033 890 aa29.74■■■□□ 2.35
SMAD4-213ENST00000591914 CBX2Q14781 532 aaPredicted RBP29.74■■■□□ 2.35
SMAD4-213ENST00000591914 SLC39A4Q6P5W5 647 aa29.74■■■□□ 2.35
SMAD4-213ENST00000591914 DCLRE1AQ6PJP8 1040 aa29.74■■■□□ 2.35
SMAD4-213ENST00000591914 FBXL18Q96ME1 805 aa29.74■■■□□ 2.35
SMAD4-213ENST00000591914 PHF7Q9BWX1 381 aaPredicted RBP29.74■■■□□ 2.35
SMAD4-213ENST00000591914 ADAM7Q9H2U9 754 aa29.74■■■□□ 2.35
SMAD4-213ENST00000591914 GOLGA2P5Q9HBQ8 144 aa29.74■■■□□ 2.35
SMAD4-213ENST00000591914 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP29.74■■■□□ 2.35
SMAD4-213ENST00000591914 A0A0B4J269 797 aa29.73■■■□□ 2.35
SMAD4-213ENST00000591914 FRMD3A2A2Y4 597 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms