RNA–Protein interactions for RNA: ENST00000590027.1

NFIX-212, Transcript of nuclear factor I X, humanhuman

TSL 2

Gene NFIX, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-212ENST00000590027 MTHFRP42898 656 aa16.5■□□□□ 0.23
NFIX-212ENST00000590027 SMTNP53814 917 aa16.5■□□□□ 0.23
NFIX-212ENST00000590027 NCKAP1LP55160 1127 aa16.5■□□□□ 0.23
NFIX-212ENST00000590027 CEBPZQ03701 1054 aaKnown RBP16.5■□□□□ 0.23
NFIX-212ENST00000590027 STRN3Q13033 797 aa16.5■□□□□ 0.23
NFIX-212ENST00000590027 USP41Q3LFD5 358 aa16.5■□□□□ 0.23
NFIX-212ENST00000590027 HERC4Q5GLZ8 1057 aaPredicted RBP16.5■□□□□ 0.23
NFIX-212ENST00000590027 RTP2Q5QGT7 225 aa16.5■□□□□ 0.23
NFIX-212ENST00000590027 TMC5Q6UXY8 1006 aa16.5■□□□□ 0.23
NFIX-212ENST00000590027 USP49Q70CQ1 688 aa16.5■□□□□ 0.23
NFIX-212ENST00000590027 RIN2Q8WYP3 895 aaPredicted RBP16.5■□□□□ 0.23
NFIX-212ENST00000590027 LARP4BQ92615 738 aaKnown RBP16.5■□□□□ 0.23
NFIX-212ENST00000590027 SNX21Q969T3 373 aa16.5■□□□□ 0.23
NFIX-212ENST00000590027 EPSTI1Q96J88 318 aa16.5■□□□□ 0.23
NFIX-212ENST00000590027 ZBTB45Q96K62 511 aaPredicted RBP16.5■□□□□ 0.23
NFIX-212ENST00000590027 SNX27Q96L92 541 aa16.5■□□□□ 0.23
NFIX-212ENST00000590027 NECTIN4Q96NY8 510 aa16.5■□□□□ 0.23
NFIX-212ENST00000590027 PPP1R10Q96QC0 940 aaKnown RBP16.5■□□□□ 0.23
NFIX-212ENST00000590027 USP28Q96RU2 1077 aa16.5■□□□□ 0.23
NFIX-212ENST00000590027 NTPCRQ9BSD7 190 aaKnown RBP16.5■□□□□ 0.23
NFIX-212ENST00000590027 CCSER1Q9C0I3 900 aa16.5■□□□□ 0.23
NFIX-212ENST00000590027 GOLGA2P5Q9HBQ8 144 aa16.5■□□□□ 0.23
NFIX-212ENST00000590027 RXFP1Q9HBX9 757 aa16.5■□□□□ 0.23
NFIX-212ENST00000590027 MAN1C1Q9NR34 630 aa16.5■□□□□ 0.23
NFIX-212ENST00000590027 LARSQ9P2J5 1176 aaKnown RBP16.5■□□□□ 0.23
NFIX-212ENST00000590027 MTCL1Q9Y4B5 1905 aaKnown RBP16.49■□□□□ 0.23
NFIX-212ENST00000590027 K7ENM7 598 aa16.49■□□□□ 0.23
NFIX-212ENST00000590027 FAM13AO94988 1023 aa16.49■□□□□ 0.23
NFIX-212ENST00000590027 BRD1O95696 1058 aa16.49■□□□□ 0.23
NFIX-212ENST00000590027 GLUD1P00367 558 aa16.49■□□□□ 0.23
NFIX-212ENST00000590027 YARSP54577 528 aaKnown RBP16.49■□□□□ 0.23
NFIX-212ENST00000590027 NOLC1Q14978 699 aaKnown RBP eCLIP16.49■□□□□ 0.23
NFIX-212ENST00000590027 PRSS55Q6UWB4 352 aaPredicted RBP16.49■□□□□ 0.23
NFIX-212ENST00000590027 GLYCTKQ8IVS8 523 aa16.49■□□□□ 0.23
NFIX-212ENST00000590027 RIPOR3Q96MK2 946 aa16.49■□□□□ 0.23
NFIX-212ENST00000590027 CLIC6Q96NY7 704 aa16.49■□□□□ 0.23
NFIX-212ENST00000590027 TCHPQ9BT92 498 aa16.49■□□□□ 0.23
NFIX-212ENST00000590027 TSHZ2Q9NRE2 1034 aa16.49■□□□□ 0.23
NFIX-212ENST00000590027 TOPORSQ9NS56 1045 aaPredicted RBP16.49■□□□□ 0.23
NFIX-212ENST00000590027 DAXXQ9UER7 740 aaPredicted RBP16.49■□□□□ 0.23
NFIX-212ENST00000590027 TECTAO75443 2155 aa16.48■□□□□ 0.23
NFIX-212ENST00000590027 C2CD4DB7Z1M9 353 aa16.48■□□□□ 0.23
NFIX-212ENST00000590027 TOM1L1O75674 476 aa16.48■□□□□ 0.23
NFIX-212ENST00000590027 KRT18P05783 430 aaKnown RBP16.48■□□□□ 0.23
NFIX-212ENST00000590027 MYBP10242 640 aa16.48■□□□□ 0.23
NFIX-212ENST00000590027 RPL17P18621 184 aaKnown RBP16.48■□□□□ 0.23
NFIX-212ENST00000590027 ZNF131P52739 623 aa16.48■□□□□ 0.23
NFIX-212ENST00000590027 XKR4Q5GH76 650 aa16.48■□□□□ 0.23
NFIX-212ENST00000590027 HSCBQ8IWL3 235 aa16.48■□□□□ 0.23
NFIX-212ENST00000590027 BICD1Q96G01 975 aa16.48■□□□□ 0.23
NFIX-212ENST00000590027 PARVGQ9HBI0 331 aa16.48■□□□□ 0.23
NFIX-212ENST00000590027 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.48■□□□□ 0.23
NFIX-212ENST00000590027 KCNG1Q9UIX4 513 aa16.48■□□□□ 0.23
NFIX-212ENST00000590027 SRPRBQ9Y5M8 271 aaKnown RBP16.48■□□□□ 0.23
NFIX-212ENST00000590027 SMIM28A0A1B0GU29 152 aa16.47■□□□□ 0.23
NFIX-212ENST00000590027 PRR33A8MZF0 331 aa16.47■□□□□ 0.23
NFIX-212ENST00000590027 H0YCG3 227 aa16.47■□□□□ 0.23
NFIX-212ENST00000590027 TMEM189-UBE2V1I3L0A0 370 aa16.47■□□□□ 0.23
NFIX-212ENST00000590027 MEFVO15553 781 aaPredicted RBP16.47■□□□□ 0.23
NFIX-212ENST00000590027 TBCAO75347 108 aaKnown RBP16.47■□□□□ 0.23
NFIX-212ENST00000590027 IGFBP6P24592 240 aaPredicted RBP16.47■□□□□ 0.23
NFIX-212ENST00000590027 CLCNKBP51801 687 aa16.47■□□□□ 0.23
NFIX-212ENST00000590027 SOX4Q06945 474 aaPredicted RBP16.47■□□□□ 0.23
NFIX-212ENST00000590027 SEZ6Q53EL9 994 aa16.47■□□□□ 0.23
NFIX-212ENST00000590027 FAM171A1Q5VUB5 890 aa16.47■□□□□ 0.23
NFIX-212ENST00000590027 ZPBP2Q6X784 338 aa16.47■□□□□ 0.23
NFIX-212ENST00000590027 HAUS6Q7Z4H7 955 aa16.47■□□□□ 0.23
NFIX-212ENST00000590027 GPR149Q86SP6 731 aa16.47■□□□□ 0.23
NFIX-212ENST00000590027 GPR65Q8IYL9 337 aa16.47■□□□□ 0.23
NFIX-212ENST00000590027 MYCT1Q8N699 235 aa16.47■□□□□ 0.23
NFIX-212ENST00000590027 C3orf58Q8NDZ4 430 aa16.47■□□□□ 0.23
NFIX-212ENST00000590027 ZMAT2Q96NC0 199 aaKnown RBP16.47■□□□□ 0.23
NFIX-212ENST00000590027 ACAP3Q96P50 834 aa16.47■□□□□ 0.23
NFIX-212ENST00000590027 HAPLN2Q9GZV7 340 aa16.47■□□□□ 0.23
NFIX-212ENST00000590027 ZHX3Q9H4I2 956 aa16.47■□□□□ 0.23
NFIX-212ENST00000590027 ZSCAN16Q9H4T2 348 aaPredicted RBP16.47■□□□□ 0.23
NFIX-212ENST00000590027 FNIP2Q9P278 1114 aa16.47■□□□□ 0.23
NFIX-212ENST00000590027 NR2E1Q9Y466 385 aa16.47■□□□□ 0.23
NFIX-212ENST00000590027 TRIOO75962 3097 aa16.47■□□□□ 0.23
NFIX-212ENST00000590027 TXLNAP40222 546 aa16.46■□□□□ 0.23
NFIX-212ENST00000590027 MATR3P43243 847 aaKnown RBP eCLIP16.46■□□□□ 0.23
NFIX-212ENST00000590027 CREMQ03060 361 aa16.46■□□□□ 0.23
NFIX-212ENST00000590027 MCL1Q07820 350 aa16.46■□□□□ 0.23
NFIX-212ENST00000590027 ELAVL2Q12926 359 aaKnown RBP16.46■□□□□ 0.23
NFIX-212ENST00000590027 PSMD5Q16401 504 aa16.46■□□□□ 0.23
NFIX-212ENST00000590027 ATAT1Q5SQI0 421 aa16.46■□□□□ 0.23
NFIX-212ENST00000590027 ALKAL1Q6UXT8 129 aa16.46■□□□□ 0.23
NFIX-212ENST00000590027 CEP57Q86XR8 500 aa16.46■□□□□ 0.23
NFIX-212ENST00000590027 PALB2Q86YC2 1186 aa16.46■□□□□ 0.23
NFIX-212ENST00000590027 PIK3R5Q8WYR1 880 aa16.46■□□□□ 0.23
NFIX-212ENST00000590027 KCNN1Q92952 543 aa16.46■□□□□ 0.23
NFIX-212ENST00000590027 UROC1Q96N76 676 aa16.46■□□□□ 0.23
NFIX-212ENST00000590027 FIZ1Q96SL8 496 aa16.46■□□□□ 0.23
NFIX-212ENST00000590027 TTPALQ9BTX7 342 aa16.46■□□□□ 0.23
NFIX-212ENST00000590027 CNTN3Q9P232 1028 aa16.46■□□□□ 0.23
NFIX-212ENST00000590027 STK17AQ9UEE5 414 aa16.46■□□□□ 0.23
NFIX-212ENST00000590027 CCDC39Q9UFE4 941 aa16.46■□□□□ 0.23
NFIX-212ENST00000590027 MORC2Q9Y6X9 1032 aaPredicted RBP16.46■□□□□ 0.23
NFIX-212ENST00000590027 HNRNPDLO14979 420 aaKnown RBP16.45■□□□□ 0.22
NFIX-212ENST00000590027 TGM5O43548 720 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms