RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 POTEBQ6S5H4 581 aa15.42■□□□□ 0.06
SMARCA4-214ENST00000589677 BEGAINQ9BUH8 593 aa15.42■□□□□ 0.06
SMARCA4-214ENST00000589677 HPSEQ9Y251 543 aa15.42■□□□□ 0.06
SMARCA4-214ENST00000589677 ZNF609O15014 1411 aa15.42■□□□□ 0.06
SMARCA4-214ENST00000589677 SLC26A4O43511 780 aa15.42■□□□□ 0.06
SMARCA4-214ENST00000589677 GRIN1Q05586 938 aa15.42■□□□□ 0.06
SMARCA4-214ENST00000589677 CDR2LQ86X02 465 aaPredicted RBP15.42■□□□□ 0.06
SMARCA4-214ENST00000589677 PLD3Q8IV08 490 aa15.42■□□□□ 0.06
SMARCA4-214ENST00000589677 HOMEZQ8IX15 550 aa15.42■□□□□ 0.06
SMARCA4-214ENST00000589677 AKAP10O43572 662 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 CAND2O75155 1236 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 ZNF189O75820 626 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 CLPTM1O96005 669 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 CDK8P49336 464 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 HERVK_113P62684 666 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 SPHKAPQ2M3C7 1700 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 MIS18BP1Q6P0N0 1132 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 GPR141Q7Z602 305 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 EML4Q9HC35 981 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 SERPINB13Q9UIV8 391 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 PCDHA6Q9UN73 950 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 PPME1Q9Y570 386 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 PCDHA8Q9Y5H6 950 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 A2ML1A8K2U0 1454 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 BMP3P12645 472 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 COPAP53621 1224 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 UBXN2AP68543 259 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 ELF3P78545 371 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 MAP3K10Q02779 954 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 MECOMQ03112 1051 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 MTHFD1LQ6UB35 978 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 SCUBE1Q8IWY4 988 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 ZNF483Q8TF39 744 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 HEXIM2Q96MH2 286 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 NGRNQ9NPE2 291 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 APEX2Q9UBZ4 518 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 PEX3P56589 373 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 NUP107P57740 925 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 STK4Q13043 487 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 WLSQ5T9L3 541 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 TMEM270Q6UE05 265 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 ABCB11O95342 1321 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 M0R3G1 203 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 IL6STP40189 918 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 MRPL28Q13084 256 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 TBC1D10BQ4KMP7 808 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 CATSPER3Q86XQ3 398 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 SIX6OS1Q8N1H7 587 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 RYBPQ8N488 228 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 TPCN2Q8NHX9 752 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 TTC8Q8TAM2 541 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 E2F7Q96AV8 911 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 PRPF18Q99633 342 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 SH3GL2Q99962 352 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 TMEM47Q9BQJ4 181 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 KLHL4Q9C0H6 718 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 HEY2Q9UBP5 337 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 TFR2Q9UP52 801 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 HEY1Q9Y5J3 304 aa15.41■□□□□ 0.06
SMARCA4-214ENST00000589677 KCNMA1Q12791 1236 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 PTK7Q13308 1070 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 KIAA0825Q8IV33 1275 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 PASD1Q8IV76 773 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 ATXN2LQ8WWM7 1075 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 MSTO1Q9BUK6 570 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 KRT16P08779 473 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 ENO3P13929 434 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 PRELPP51888 382 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 IGDCC4Q8TDY8 1250 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 PPP2R3CQ969Q6 453 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 CDHR1Q96JP9 859 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 TRAPPC9Q96Q05 1148 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 DHX36Q9H2U1 1008 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 KLHL8Q9P2G9 620 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 CNOT7Q9UIV1 285 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 ZBTB5O15062 677 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 KLK7P49862 253 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 PPP6R3Q5H9R7 873 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 EPS8L3Q8TE67 593 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 ALG6Q9Y672 507 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 SNRPAP09012 282 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 SERPINB8P50452 374 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 GEMIN4P57678 1058 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 SLC34A1Q06495 639 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 CDO1Q16878 200 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 USP49Q70CQ1 688 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.4■□□□□ 0.061e-7■■■■■ 40.8
SMARCA4-214ENST00000589677 CNBD2Q96M20 576 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 CAAP1Q9H8G2 361 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 BFARQ9NZS9 450 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 CAPN6Q9Y6Q1 641 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 UBE4BO95155 1302 aa15.4■□□□□ 0.06
SMARCA4-214ENST00000589677 GSG1L2A8MUP6 293 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 TPP2P29144 1249 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 GNA15P30679 374 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 HEATR6Q6AI08 1181 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 PSPC1Q8WXF1 523 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 NMD3Q96D46 503 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 KIF17Q9P2E2 1029 aa15.39■□□□□ 0.05
SMARCA4-214ENST00000589677 LRRC7Q96NW7 1537 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms