RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 ADAM28Q9UKQ2 775 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 TNFSF13BQ9Y275 285 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 TPRP12270 2363 aaKnown RBP11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 MYO10Q9HD67 2058 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 SLC16A4O15374 487 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 STX6O43752 255 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 TADA2AO75478 443 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 FAM13AO94988 1023 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 PLCG1P19174 1290 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 KLRC2P26717 231 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 MTHFRP42898 656 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 ID4P47928 161 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 AFF1P51825 1210 aaKnown RBP11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 SLC12A3P55017 1021 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 RAD51AP2Q09MP3 1159 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 ELAVL2Q12926 359 aaKnown RBP11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 KCNC3Q14003 757 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 NOLC1Q14978 699 aaKnown RBP eCLIP11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 USP41Q3LFD5 358 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 FUT10Q6P4F1 479 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 LARP4BQ92615 738 aaKnown RBP11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 BICD1Q96G01 975 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 UROC1Q96N76 676 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 TCHPQ9BT92 498 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 FOXD4L1Q9NU39 408 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 MIOSQ9NXC5 875 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 GDAQ9Y2T3 454 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 NR2E1Q9Y466 385 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 CFAP47Q6ZTR5 3102 aa11.62□□□□□ -0.55
CLPTM1-211ENST00000589347 EP300Q09472 2414 aaPredicted RBP11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 ACACBO00763 2458 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 CASTOR2A6NHX0 329 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 H0Y858 1186 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 K7ENM7 598 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 C2CD2LO14523 706 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 GALR2O43603 387 aaPredicted RBP11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 MCF2P10911 925 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 GRM5P41594 1212 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 MATR3P43243 847 aaKnown RBP eCLIP11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 RBM10P98175 930 aaKnown RBP11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 DSG1Q02413 1049 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 MAPK7Q13164 816 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 KARSQ15046 597 aaKnown RBP11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 NT5DC1Q5TFE4 455 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 EEF1DP3Q658K8 133 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 PDXDC1Q6P996 788 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 MPZL3Q6UWV2 235 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 GPR65Q8IYL9 337 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 DAW1Q8N136 415 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 SUSD6Q92537 303 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 RAD54LQ92698 747 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 KLHL5Q96PQ7 755 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 ACO2Q99798 780 aaKnown RBP11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 VN1R3Q9BXE9 311 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 CCSER1Q9C0I3 900 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 CDT1Q9H211 546 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 PARVGQ9HBI0 331 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 POLD4Q9HCU8 107 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 SLC38A7Q9NVC3 462 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 ANKFY1Q9P2R3 1169 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 STK17AQ9UEE5 414 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 GTF3C3Q9Y5Q9 886 aa11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 MORC2Q9Y6X9 1032 aaPredicted RBP11.61□□□□□ -0.55
CLPTM1-211ENST00000589347 DOCK8Q8NF50 2099 aa11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 TTLL13PA6NNM8 815 aa11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 PTGESO14684 152 aa11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 TOM1L1O75674 476 aa11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 GLUD1P00367 558 aa11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 EDN1P05305 212 aa11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 HARSP12081 509 aaKnown RBP11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 MARCKSP29966 332 aaPredicted RBP11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 CLCN4P51793 760 aa11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 NCKAP1LP55160 1127 aa11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 DHX8Q14562 1220 aaKnown RBP11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 KYAT1Q16773 422 aa11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 RARS2Q5T160 578 aaKnown RBP11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 SYCE2Q6PIF2 218 aa11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 ZPBP2Q6X784 338 aa11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 RNF168Q8IYW5 571 aaPredicted RBP11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 GSTCDQ8NEC7 633 aa11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 ZNF396Q96N95 335 aaPredicted RBP11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 REEP2Q9BRK0 252 aa11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 TARS2Q9BW92 718 aaKnown RBP11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 APOL5Q9BWW9 433 aa11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 ADAM7Q9H2U9 754 aa11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 ZHX3Q9H4I2 956 aa11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 MTMR6Q9Y217 621 aa11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 CLIC4Q9Y696 253 aa11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 CHD6Q8TD26 2715 aa11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 CEP250Q9BV73 2442 aa11.6□□□□□ -0.55
CLPTM1-211ENST00000589347 TSC2P49815 1807 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 SFI1A8K8P3 1242 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 TMEM189-UBE2V1I3L0A0 370 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 HNRNPDLO14979 420 aaKnown RBP11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 KIF4AO95239 1232 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 BRD1O95696 1058 aa11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 CNPP09543 421 aaKnown RBP11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 MAPTP10636 758 aaKnown RBP11.59□□□□□ -0.55
CLPTM1-211ENST00000589347 EPCAMP16422 314 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms