RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 HNRNPA1P09651 372 aaKnown RBP eCLIP16.74■□□□□ 0.27
SF3A2-204ENST00000589118 EVCP57679 992 aa16.74■□□□□ 0.27
SF3A2-204ENST00000589118 NCBP1Q09161 790 aaKnown RBP16.74■□□□□ 0.27
SF3A2-204ENST00000589118 SPEM2Q0P670 501 aa16.74■□□□□ 0.27
SF3A2-204ENST00000589118 MTAPQ13126 283 aa16.74■□□□□ 0.27
SF3A2-204ENST00000589118 TANGO2Q6ICL3 276 aa16.74■□□□□ 0.27
SF3A2-204ENST00000589118 SLC27A1Q6PCB7 646 aa16.74■□□□□ 0.27
SF3A2-204ENST00000589118 PIK3AP1Q6ZUJ8 805 aa16.74■□□□□ 0.27
SF3A2-204ENST00000589118 MTSS1LQ765P7 747 aa16.74■□□□□ 0.27
SF3A2-204ENST00000589118 KRT25Q7Z3Z0 450 aa16.74■□□□□ 0.27
SF3A2-204ENST00000589118 EXOC8Q8IYI6 725 aa16.74■□□□□ 0.27
SF3A2-204ENST00000589118 FBXL16Q8N461 479 aa16.74■□□□□ 0.27
SF3A2-204ENST00000589118 PIGOQ8TEQ8 1089 aa16.74■□□□□ 0.27
SF3A2-204ENST00000589118 PIK3R5Q8WYR1 880 aa16.74■□□□□ 0.27
SF3A2-204ENST00000589118 NELL1Q92832 810 aa16.74■□□□□ 0.27
SF3A2-204ENST00000589118 CCDC51Q96ER9 411 aa16.74■□□□□ 0.27
SF3A2-204ENST00000589118 EPC1Q9H2F5 836 aa16.74■□□□□ 0.27
SF3A2-204ENST00000589118 ZSWIM4Q9H7M6 989 aa16.74■□□□□ 0.27
SF3A2-204ENST00000589118 CDV3Q9UKY7 258 aaKnown RBP16.74■□□□□ 0.27
SF3A2-204ENST00000589118 PCDHGA2Q9Y5H1 932 aa16.74■□□□□ 0.27
SF3A2-204ENST00000589118 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.74■□□□□ 0.27
SF3A2-204ENST00000589118 SF3B1O75533 1304 aaKnown RBP eCLIP16.73■□□□□ 0.27
SF3A2-204ENST00000589118 TICRRQ7Z2Z1 1910 aa16.73■□□□□ 0.27
SF3A2-204ENST00000589118 A0A1B0GUA9 196 aa16.73■□□□□ 0.27
SF3A2-204ENST00000589118 C1RP00736 705 aa16.73■□□□□ 0.27
SF3A2-204ENST00000589118 EDN1P05305 212 aa16.73■□□□□ 0.27
SF3A2-204ENST00000589118 HOXC13P31276 330 aa16.73■□□□□ 0.27
SF3A2-204ENST00000589118 TUSC3Q13454 348 aa16.73■□□□□ 0.27
SF3A2-204ENST00000589118 TFDP1Q14186 410 aa16.73■□□□□ 0.27
SF3A2-204ENST00000589118 GRM2Q14416 872 aa16.73■□□□□ 0.27
SF3A2-204ENST00000589118 MXD4Q14582 209 aaPredicted RBP16.73■□□□□ 0.27
SF3A2-204ENST00000589118 NAB2Q15742 525 aa16.73■□□□□ 0.27
SF3A2-204ENST00000589118 PABPC1LQ4VXU2 614 aaKnown RBP16.73■□□□□ 0.27
SF3A2-204ENST00000589118 NEK8Q86SG6 692 aa16.73■□□□□ 0.27
SF3A2-204ENST00000589118 IFNLR1Q8IU57 520 aaPredicted RBP16.73■□□□□ 0.27
SF3A2-204ENST00000589118 CLDN23Q96B33 292 aa16.73■□□□□ 0.27
SF3A2-204ENST00000589118 EIF2AK1Q9BQI3 630 aaKnown RBP16.73■□□□□ 0.27
SF3A2-204ENST00000589118 POLR3FQ9H1D9 316 aaPredicted RBP16.73■□□□□ 0.27
SF3A2-204ENST00000589118 POLD4Q9HCU8 107 aa16.73■□□□□ 0.27
SF3A2-204ENST00000589118 RALYQ9UKM9 306 aaKnown RBP16.73■□□□□ 0.27
SF3A2-204ENST00000589118 ZFHX4Q86UP3 3567 aa16.73■□□□□ 0.27
SF3A2-204ENST00000589118 CCDC194A0A1B0GVG4 234 aa16.72■□□□□ 0.27
SF3A2-204ENST00000589118 CEBPBP17676 345 aa16.72■□□□□ 0.27
SF3A2-204ENST00000589118 LIG1P18858 919 aa16.72■□□□□ 0.27
SF3A2-204ENST00000589118 CREMQ03060 361 aa16.72■□□□□ 0.27
SF3A2-204ENST00000589118 PPP4R3AQ6IN85 833 aa16.72■□□□□ 0.27
SF3A2-204ENST00000589118 NOSTRINQ8IVI9 506 aa16.72■□□□□ 0.27
SF3A2-204ENST00000589118 GPR65Q8IYL9 337 aa16.72■□□□□ 0.27
SF3A2-204ENST00000589118 OSBPL6Q9BZF3 934 aa16.72■□□□□ 0.27
SF3A2-204ENST00000589118 MRPS23Q9Y3D9 190 aaKnown RBP16.72■□□□□ 0.27
SF3A2-204ENST00000589118 PPME1Q9Y570 386 aa16.72■□□□□ 0.27
SF3A2-204ENST00000589118 CDY1Q9Y6F8 540 aa16.72■□□□□ 0.27
SF3A2-204ENST00000589118 RALGAPA1Q6GYQ0 2036 aa16.71■□□□□ 0.27
SF3A2-204ENST00000589118 LRRIQ4A6NIV6 560 aa16.71■□□□□ 0.27
SF3A2-204ENST00000589118 CPLX1O14810 134 aa16.71■□□□□ 0.27
SF3A2-204ENST00000589118 XYLBO75191 536 aa16.71■□□□□ 0.27
SF3A2-204ENST00000589118 GLRA4Q5JXX5 417 aa16.71■□□□□ 0.27
SF3A2-204ENST00000589118 CD300LGQ6UXG3 332 aa16.71■□□□□ 0.27
SF3A2-204ENST00000589118 HACE1Q8IYU2 909 aa16.71■□□□□ 0.27
SF3A2-204ENST00000589118 TCEAL4Q96EI5 215 aa16.71■□□□□ 0.27
SF3A2-204ENST00000589118 GDAQ9Y2T3 454 aa16.71■□□□□ 0.27
SF3A2-204ENST00000589118 WNT7AO00755 349 aa16.7■□□□□ 0.26
SF3A2-204ENST00000589118 USO1O60763 962 aaKnown RBP16.7■□□□□ 0.26
SF3A2-204ENST00000589118 RECQL4O94761 1208 aa16.7■□□□□ 0.26
SF3A2-204ENST00000589118 THP07101 528 aa16.7■□□□□ 0.26
SF3A2-204ENST00000589118 CENPBP07199 599 aaPredicted RBP16.7■□□□□ 0.26
SF3A2-204ENST00000589118 RHOP08100 348 aa16.7■□□□□ 0.26
SF3A2-204ENST00000589118 BRCC3P46736 316 aa16.7■□□□□ 0.26
SF3A2-204ENST00000589118 PFKPQ01813 784 aa16.7■□□□□ 0.26
SF3A2-204ENST00000589118 POU5F1BQ06416 359 aa16.7■□□□□ 0.26
SF3A2-204ENST00000589118 DMWDQ09019 674 aa16.7■□□□□ 0.26
SF3A2-204ENST00000589118 SRSF5Q13243 272 aaKnown RBP16.7■□□□□ 0.26
SF3A2-204ENST00000589118 RAB33AQ14088 237 aa16.7■□□□□ 0.26
SF3A2-204ENST00000589118 EEF1DP3Q658K8 133 aa16.7■□□□□ 0.26
SF3A2-204ENST00000589118 ZNF852Q6ZMS4 543 aa16.7■□□□□ 0.26
SF3A2-204ENST00000589118 RUFY3Q7L099 469 aa16.7■□□□□ 0.26
SF3A2-204ENST00000589118 ZNF687Q8N1G0 1237 aa16.7■□□□□ 0.26
SF3A2-204ENST00000589118 HSD17B14Q9BPX1 270 aa16.7■□□□□ 0.26
SF3A2-204ENST00000589118 PDZD7Q9H5P4 517 aa16.7■□□□□ 0.26
SF3A2-204ENST00000589118 GOLGA2P5Q9HBQ8 144 aa16.7■□□□□ 0.26
SF3A2-204ENST00000589118 PRMT8Q9NR22 394 aaPredicted RBP16.7■□□□□ 0.26
SF3A2-204ENST00000589118 COL4A2P08572 1712 aa16.7■□□□□ 0.26
SF3A2-204ENST00000589118 CHD8Q9HCK8 2581 aa16.7■□□□□ 0.26
SF3A2-204ENST00000589118 PRR5-ARHGAP8B1AHC4 643 aa16.69■□□□□ 0.26
SF3A2-204ENST00000589118 TBX3O15119 743 aa16.69■□□□□ 0.26
SF3A2-204ENST00000589118 GDF9O60383 454 aa16.69■□□□□ 0.26
SF3A2-204ENST00000589118 TDGF1P13385 188 aa16.69■□□□□ 0.26
SF3A2-204ENST00000589118 KCNA4P22459 653 aa16.69■□□□□ 0.26
SF3A2-204ENST00000589118 FCARP24071 287 aa16.69■□□□□ 0.26
SF3A2-204ENST00000589118 TKTP29401 623 aaKnown RBP16.69■□□□□ 0.26
SF3A2-204ENST00000589118 HOXA9P31269 272 aa16.69■□□□□ 0.26
SF3A2-204ENST00000589118 RARRES1P49788 294 aa16.69■□□□□ 0.26
SF3A2-204ENST00000589118 ARHGAP8P85298 464 aa16.69■□□□□ 0.26
SF3A2-204ENST00000589118 LMNB2Q03252 620 aa16.69■□□□□ 0.26
SF3A2-204ENST00000589118 ADCY1Q08828 1119 aa16.69■□□□□ 0.26
SF3A2-204ENST00000589118 PCBP1Q15365 356 aaKnown RBP eCLIP16.69■□□□□ 0.26
SF3A2-204ENST00000589118 ST3GAL2Q16842 350 aa16.69■□□□□ 0.26
SF3A2-204ENST00000589118 BSNDQ8WZ55 320 aa16.69■□□□□ 0.26
SF3A2-204ENST00000589118 SECISBP2LQ93073 1101 aaKnown RBP16.69■□□□□ 0.26
SF3A2-204ENST00000589118 RTKNQ9BST9 563 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms