RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 ZNF396Q96N95 335 aaPredicted RBP12.68□□□□□ -0.38
RFX1-204ENST00000588885 CLIC6Q96NY7 704 aa12.68□□□□□ -0.38
RFX1-204ENST00000588885 ACO2Q99798 780 aaKnown RBP12.68□□□□□ -0.38
RFX1-204ENST00000588885 HERC2P3Q9BVR0 1158 aa12.68□□□□□ -0.38
RFX1-204ENST00000588885 PHF7Q9BWX1 381 aaPredicted RBP12.68□□□□□ -0.38
RFX1-204ENST00000588885 EMILIN2Q9BXX0 1053 aa12.68□□□□□ -0.38
RFX1-204ENST00000588885 ARHGAP28Q9P2N2 729 aa12.68□□□□□ -0.38
RFX1-204ENST00000588885 MUTYHQ9UIF7 546 aa12.68□□□□□ -0.38
RFX1-204ENST00000588885 IRAK3Q9Y616 596 aa12.68□□□□□ -0.38
RFX1-204ENST00000588885 TDRD15B5MCY1 1934 aaKnown RBP12.68□□□□□ -0.38
RFX1-204ENST00000588885 TEX28O15482 410 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 LILRB3O75022 631 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 KRT18P05783 430 aaKnown RBP12.67□□□□□ -0.38
RFX1-204ENST00000588885 THP07101 528 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 HOXB8P17481 243 aaPredicted RBP12.67□□□□□ -0.38
RFX1-204ENST00000588885 PLCG1P19174 1290 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 GLUD2P49448 558 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 STRN3Q13033 797 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 TUSC3Q13454 348 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 HSP90AA2PQ14568 343 aaPredicted RBP12.67□□□□□ -0.38
RFX1-204ENST00000588885 PTPAQ15257 358 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 ZNF568Q3ZCX4 644 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 SEZ6Q53EL9 994 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 KIAA0319Q5VV43 1072 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 CES5AQ6NT32 575 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 PALB2Q86YC2 1186 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 GLYCTKQ8IVS8 523 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 CEP120Q8N960 986 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 RIN2Q8WYP3 895 aaPredicted RBP12.67□□□□□ -0.38
RFX1-204ENST00000588885 MRPL4Q9BYD3 311 aaKnown RBP12.67□□□□□ -0.38
RFX1-204ENST00000588885 CDT1Q9H211 546 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 ADAM7Q9H2U9 754 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 ZHX3Q9H4I2 956 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 TMEM134Q9H6X4 195 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 C11orf16Q9NQ32 467 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 BLOC1S4Q9NUP1 217 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 TFIP11Q9UBB9 837 aaKnown RBP12.67□□□□□ -0.38
RFX1-204ENST00000588885 TNFSF13BQ9Y275 285 aa12.67□□□□□ -0.38
RFX1-204ENST00000588885 PHLPP2Q6ZVD8 1323 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 LOC730098B7Z3J9 87 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 MAPTP10636 758 aaKnown RBP12.66□□□□□ -0.38
RFX1-204ENST00000588885 RPL17P18621 184 aaKnown RBP12.66□□□□□ -0.38
RFX1-204ENST00000588885 MATR3P43243 847 aaKnown RBP eCLIP12.66□□□□□ -0.38
RFX1-204ENST00000588885 CLCN4P51793 760 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 SMTNP53814 917 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 USP41Q3LFD5 358 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 FUT10Q6P4F1 479 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 PRSS55Q6UWB4 352 aaPredicted RBP12.66□□□□□ -0.38
RFX1-204ENST00000588885 APBB1IPQ7Z5R6 666 aaPredicted RBP12.66□□□□□ -0.38
RFX1-204ENST00000588885 PPFIBP1Q86W92 1011 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 CEP57Q86XR8 500 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 MYCT1Q8N699 235 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 TMEM161BQ8NDZ6 487 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 LEO1Q8WVC0 666 aaPredicted RBP12.66□□□□□ -0.38
RFX1-204ENST00000588885 SPIRE2Q8WWL2 714 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 RAD54LQ92698 747 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 FBXL18Q96ME1 805 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 REEP2Q9BRK0 252 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 TIPINQ9BVW5 301 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 PANK2Q9BZ23 570 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 C17orf75Q9HAS0 396 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 PTPRHQ9HD43 1115 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 ANKFY1Q9P2R3 1169 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 STK39Q9UEW8 545 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 ADAM28Q9UKQ2 775 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 MYO10Q9HD67 2058 aa12.66□□□□□ -0.38
RFX1-204ENST00000588885 MUC6Q6W4X9 2439 aa12.65□□□□□ -0.38
RFX1-204ENST00000588885 SMIM28A0A1B0GU29 152 aa12.65□□□□□ -0.38
RFX1-204ENST00000588885 FAM13AO94988 1023 aa12.65□□□□□ -0.38
RFX1-204ENST00000588885 KIF4AO95239 1232 aa12.65□□□□□ -0.38
RFX1-204ENST00000588885 EFEMP2O95967 443 aa12.65□□□□□ -0.38
RFX1-204ENST00000588885 NASPP49321 788 aaPredicted RBP12.65□□□□□ -0.38
RFX1-204ENST00000588885 YARSP54577 528 aaKnown RBP12.65□□□□□ -0.38
RFX1-204ENST00000588885 DSG1Q02413 1049 aa12.65□□□□□ -0.38
RFX1-204ENST00000588885 ITIH3Q06033 890 aa12.65□□□□□ -0.38
RFX1-204ENST00000588885 NAB2Q15742 525 aa12.65□□□□□ -0.38
RFX1-204ENST00000588885 ATAT1Q5SQI0 421 aa12.65□□□□□ -0.38
RFX1-204ENST00000588885 FAM171A1Q5VUB5 890 aa12.65□□□□□ -0.38
RFX1-204ENST00000588885 KCTD17Q8N5Z5 321 aa12.65□□□□□ -0.38
RFX1-204ENST00000588885 BICD1Q96G01 975 aa12.65□□□□□ -0.38
RFX1-204ENST00000588885 NTPCRQ9BSD7 190 aaKnown RBP12.65□□□□□ -0.38
RFX1-204ENST00000588885 CCDC94Q9BW85 323 aaPredicted RBP12.65□□□□□ -0.38
RFX1-204ENST00000588885 POMKQ9H5K3 350 aa12.65□□□□□ -0.38
RFX1-204ENST00000588885 GOLGA2P5Q9HBQ8 144 aa12.65□□□□□ -0.38
RFX1-204ENST00000588885 DZANK1Q9NVP4 752 aa12.65□□□□□ -0.38
RFX1-204ENST00000588885 FBXO2Q9UK22 296 aaPredicted RBP12.65□□□□□ -0.38
RFX1-204ENST00000588885 SSX2IPQ9Y2D8 614 aa12.65□□□□□ -0.38
RFX1-204ENST00000588885 GOLGA6L22H0YM25 854 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 I3L4J1 428 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 SLC26A4O43511 780 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 YEATS4O95619 227 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 ADH1AP07327 375 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 MCF2P10911 925 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 GRM5P41594 1212 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 CLCNKBP51801 687 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 STK38Q15208 465 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 RTP2Q5QGT7 225 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 ATL3Q6DD88 541 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 MPZL3Q6UWV2 235 aa12.64□□□□□ -0.39
RFX1-204ENST00000588885 HAUS6Q7Z4H7 955 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms