RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 FAXDC2Q96IV6 333 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 ALPK3Q96L96 1907 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 CGRRF1Q99675 332 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 HAPLN2Q9GZV7 340 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 TMX1Q9H3N1 280 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 IL23AQ9NPF7 189 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 TMEM161AQ9NX61 479 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 CNTN3Q9P232 1028 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 KANSL3Q9P2N6 904 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 IPPQ9Y573 584 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 MICAL3Q7RTP6 2002 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 LTBP2Q14767 1821 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 A0A1W2PQC6 194 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 TTC26A0AVF1 554 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 TRIM43BA6NCK2 446 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 GOLGA6L6A8MZA4 724 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 C9IYK1 514 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 TNNC2P02585 160 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 CYP3A5P20815 502 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 RFX1P22670 979 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 CCL23P55773 120 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 FPGSQ05932 587 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 KCNH2Q12809 1159 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 ENOX2Q16206 610 aaKnown RBP11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 DUOXA2Q1HG44 320 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 XKR4Q5GH76 650 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 DCAF17Q5H9S7 520 aaPredicted RBP11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 KRT39Q6A163 491 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 ECHDC2Q86YB7 292 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 NPAS4Q8IUM7 802 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 CREBRFQ8IUR6 639 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 FMNL3Q8IVF7 1028 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 RDH13Q8NBN7 331 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 CCDC150Q8NCX0 1101 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 TRIM43Q96BQ3 446 aaPredicted RBP11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 ANKRD36BP1Q96IX9 119 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 SNX27Q96L92 541 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 RPS6KC1Q96S38 1066 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 LBHD1Q9BQE6 289 aaPredicted RBP11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 EIF2AQ9BY44 585 aaKnown RBP11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 MRPL9Q9BYD2 267 aaKnown RBP11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 TRIM5Q9C035 493 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 FAM124BQ9H5Z6 455 aaPredicted RBP11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 TMEM8AQ9HCN3 771 aa11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 RTN4Q9NQC3 1192 aaKnown RBP11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 R3HCC1Q9Y3T6 440 aaKnown RBP11.21□□□□□ -0.61
CLPTM1-207ENST00000587537 BRCA2P51587 3418 aa11.21□□□□□ -0.62
CLPTM1-207ENST00000587537 TTC3P53804 2025 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 UMODL1Q5DID0 1318 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 GOLGA8IPA6NC78 632 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 GOLGA8JA6NMD2 632 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 ZC3H11AO75152 810 aaKnown RBP eCLIP11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 RECQL4O94761 1208 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 AMHP03971 560 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 TMEM191BP0C7N4 346 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 CXCL8P10145 99 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 ATP1A3P13637 1013 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 TNNI1P19237 187 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 CDC25BP30305 580 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 FMO5P49326 533 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 MXI1P50539 228 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 TRIM14Q14142 442 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 GPNMBQ14956 572 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 NR1I3Q14994 352 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 TMEM132DQ14C87 1099 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 GLB1LQ6UWU2 654 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 ALKAL1Q6UXT8 129 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 GBP6Q6ZN66 633 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 APTXQ7Z2E3 356 aaKnown RBP11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 ZNF598Q86UK7 904 aaKnown RBP11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 C7orf61Q8IZ16 206 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 SMG8Q8ND04 991 aaKnown RBP11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 BEST2Q8NFU1 509 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 URGCPQ8TCY9 931 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 TAF4BQ92750 862 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 SCLYQ96I15 445 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 ERGIC2Q96RQ1 377 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 NUP58Q9BVL2 599 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 IMPG2Q9BZV3 1241 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 IKZF4Q9H2S9 585 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 NXF3Q9H4D5 531 aaKnown RBP11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 RSAD1Q9HA92 442 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 SNTG2Q9NY99 539 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 PARP2Q9UGN5 583 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 ITGA11Q9UKX5 1188 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 LRFN2Q9ULH4 789 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 UBQLN1Q9UMX0 589 aaKnown RBP11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 COQ4Q9Y3A0 265 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 PCDHB7Q9Y5E2 793 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 ANK1P16157 1881 aa11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 PDCD11Q14690 1871 aaKnown RBP11.2□□□□□ -0.62
CLPTM1-207ENST00000587537 SCN5AQ14524 2016 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 ITIH6Q6UXX5 1313 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 PES1O00541 588 aaKnown RBP11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 ENPP3O14638 875 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 MGEA5O60502 916 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 TPM1P09493 284 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 DLATP10515 647 aaKnown RBP11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 PNPLA4P41247 253 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 KCNJ6P48051 423 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms