RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 ACAP3Q96P50 834 aa19.59■□□□□ 0.73
SRSF1-209ENST00000585096 PPP1R10Q96QC0 940 aaKnown RBP19.59■□□□□ 0.73
SRSF1-209ENST00000585096 CXCL16Q9H2A7 254 aa19.59■□□□□ 0.73
SRSF1-209ENST00000585096 CACNG4Q9UBN1 327 aa19.59■□□□□ 0.73
SRSF1-209ENST00000585096 CLIC4Q9Y696 253 aa19.59■□□□□ 0.73
SRSF1-209ENST00000585096 SMIM28A0A1B0GU29 152 aa19.58■□□□□ 0.72
SRSF1-209ENST00000585096 TOM1L1O75674 476 aa19.58■□□□□ 0.72
SRSF1-209ENST00000585096 PLCG1P19174 1290 aa19.58■□□□□ 0.72
SRSF1-209ENST00000585096 SP100P23497 879 aaPredicted RBP19.58■□□□□ 0.72
SRSF1-209ENST00000585096 CACNB1Q02641 598 aaPredicted RBP19.58■□□□□ 0.72
SRSF1-209ENST00000585096 PTPAQ15257 358 aa19.58■□□□□ 0.72
SRSF1-209ENST00000585096 GLRA4Q5JXX5 417 aa19.58■□□□□ 0.72
SRSF1-209ENST00000585096 FAM171A1Q5VUB5 890 aa19.58■□□□□ 0.72
SRSF1-209ENST00000585096 DCLRE1AQ6PJP8 1040 aa19.58■□□□□ 0.72
SRSF1-209ENST00000585096 C15orf39Q6ZRI6 1047 aa19.58■□□□□ 0.72
SRSF1-209ENST00000585096 CEP120Q8N960 986 aa19.58■□□□□ 0.72
SRSF1-209ENST00000585096 HASPINQ8TF76 798 aa19.58■□□□□ 0.72
SRSF1-209ENST00000585096 HDAC7Q8WUI4 952 aa19.58■□□□□ 0.72
SRSF1-209ENST00000585096 RAD54LQ92698 747 aa19.58■□□□□ 0.72
SRSF1-209ENST00000585096 REEP2Q9BRK0 252 aa19.58■□□□□ 0.72
SRSF1-209ENST00000585096 TTPALQ9BTX7 342 aa19.58■□□□□ 0.72
SRSF1-209ENST00000585096 CCSER1Q9C0I3 900 aa19.58■□□□□ 0.72
SRSF1-209ENST00000585096 ZSCAN16Q9H4T2 348 aaPredicted RBP19.58■□□□□ 0.72
SRSF1-209ENST00000585096 MAN1C1Q9NR34 630 aa19.58■□□□□ 0.72
SRSF1-209ENST00000585096 FOXD4L1Q9NU39 408 aa19.58■□□□□ 0.72
SRSF1-209ENST00000585096 BLOC1S4Q9NUP1 217 aa19.58■□□□□ 0.72
SRSF1-209ENST00000585096 SLC38A7Q9NVC3 462 aa19.58■□□□□ 0.72
SRSF1-209ENST00000585096 CCDC39Q9UFE4 941 aa19.58■□□□□ 0.72
SRSF1-209ENST00000585096 FAM13AO94988 1023 aa19.57■□□□□ 0.72
SRSF1-209ENST00000585096 NCKAP1LP55160 1127 aa19.57■□□□□ 0.72
SRSF1-209ENST00000585096 XKR4Q5GH76 650 aa19.57■□□□□ 0.72
SRSF1-209ENST00000585096 RTP2Q5QGT7 225 aa19.57■□□□□ 0.72
SRSF1-209ENST00000585096 PDXDC1Q6P996 788 aa19.57■□□□□ 0.72
SRSF1-209ENST00000585096 CYP26C1Q6V0L0 522 aa19.57■□□□□ 0.72
SRSF1-209ENST00000585096 CEP57Q86XR8 500 aa19.57■□□□□ 0.72
SRSF1-209ENST00000585096 MYCT1Q8N699 235 aa19.57■□□□□ 0.72
SRSF1-209ENST00000585096 CMASQ8NFW8 434 aaPredicted RBP19.57■□□□□ 0.72
SRSF1-209ENST00000585096 PLEKHA4Q9H4M7 779 aa19.57■□□□□ 0.72
SRSF1-209ENST00000585096 PARVGQ9HBI0 331 aa19.57■□□□□ 0.72
SRSF1-209ENST00000585096 ANKFY1Q9P2R3 1169 aa19.57■□□□□ 0.72
SRSF1-209ENST00000585096 MTMR6Q9Y217 621 aa19.57■□□□□ 0.72
SRSF1-209ENST00000585096 USTQ9Y2C2 406 aa19.57■□□□□ 0.72
SRSF1-209ENST00000585096 SRPRBQ9Y5M8 271 aaKnown RBP19.57■□□□□ 0.72
SRSF1-209ENST00000585096 TMEM189-UBE2V1I3L0A0 370 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 ABLIM1O14639 778 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 CLDN3O15551 220 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 TRAPPC3O43617 180 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 STX6O43752 255 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 TBCAO75347 108 aaKnown RBP19.56■□□□□ 0.72
SRSF1-209ENST00000585096 B3GAT3O94766 335 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 HARSP12081 509 aaKnown RBP19.56■□□□□ 0.72
SRSF1-209ENST00000585096 MARCKSP29966 332 aaPredicted RBP19.56■□□□□ 0.72
SRSF1-209ENST00000585096 DDIT3P35638 169 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 TXLNAP40222 546 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 ZXDAP98168 799 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 MCM6Q14566 821 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 NOLC1Q14978 699 aaKnown RBP eCLIP19.56■□□□□ 0.724e-11■□□□□ 10.2
SRSF1-209ENST00000585096 PTPN21Q16825 1174 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 FAM173BQ6P4H8 233 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 ALKAL1Q6UXT8 129 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 HAUS6Q7Z4H7 955 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 PALB2Q86YC2 1186 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 PLCD3Q8N3E9 789 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 TDRD5Q8NAT2 981 aaKnown RBP19.56■□□□□ 0.72
SRSF1-209ENST00000585096 PIK3R5Q8WYR1 880 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 LARP4BQ92615 738 aaKnown RBP19.56■□□□□ 0.72
SRSF1-209ENST00000585096 KCNN1Q92952 543 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 SNX21Q969T3 373 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 BICD1Q96G01 975 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 DDX27Q96GQ7 796 aaKnown RBP19.56■□□□□ 0.72
SRSF1-209ENST00000585096 RAPGEFL1Q9UHV5 662 aa19.56■□□□□ 0.72
SRSF1-209ENST00000585096 FBXO2Q9UK22 296 aaPredicted RBP19.56■□□□□ 0.72
SRSF1-209ENST00000585096 C2CD4DB7Z1M9 353 aa19.55■□□□□ 0.72
SRSF1-209ENST00000585096 TGM5O43548 720 aa19.55■□□□□ 0.72
SRSF1-209ENST00000585096 KCNE1P15382 129 aa19.55■□□□□ 0.72
SRSF1-209ENST00000585096 ABCD1P33897 745 aa19.55■□□□□ 0.72
SRSF1-209ENST00000585096 MATR3P43243 847 aaKnown RBP eCLIP19.55■□□□□ 0.72
SRSF1-209ENST00000585096 CLCNKBP51801 687 aa19.55■□□□□ 0.72
SRSF1-209ENST00000585096 ZNF131P52739 623 aa19.55■□□□□ 0.72
SRSF1-209ENST00000585096 CEBPZQ03701 1054 aaKnown RBP19.55■□□□□ 0.72
SRSF1-209ENST00000585096 UPP1Q16831 310 aa19.55■□□□□ 0.72
SRSF1-209ENST00000585096 PRSS55Q6UWB4 352 aaPredicted RBP19.55■□□□□ 0.72
SRSF1-209ENST00000585096 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.55■□□□□ 0.72
SRSF1-209ENST00000585096 TRIM67Q6ZTA4 783 aa19.55■□□□□ 0.72
SRSF1-209ENST00000585096 CCDC149Q6ZUS6 474 aa19.55■□□□□ 0.72
SRSF1-209ENST00000585096 LRRC15Q8TF66 581 aa19.55■□□□□ 0.72
SRSF1-209ENST00000585096 ACSF2Q96CM8 615 aaPredicted RBP19.55■□□□□ 0.72
SRSF1-209ENST00000585096 EPSTI1Q96J88 318 aa19.55■□□□□ 0.72
SRSF1-209ENST00000585096 ZBTB45Q96K62 511 aaPredicted RBP19.55■□□□□ 0.72
SRSF1-209ENST00000585096 SNX27Q96L92 541 aa19.55■□□□□ 0.72
SRSF1-209ENST00000585096 RHOBTB2Q9BYZ6 727 aa19.55■□□□□ 0.72
SRSF1-209ENST00000585096 ZHX3Q9H4I2 956 aa19.55■□□□□ 0.72
SRSF1-209ENST00000585096 CCDC195A0A1B0GUA6 201 aa19.54■□□□□ 0.72
SRSF1-209ENST00000585096 TRAK2O60296 914 aa19.54■□□□□ 0.72
SRSF1-209ENST00000585096 SPATA31D3P0C874 917 aa19.54■□□□□ 0.72
SRSF1-209ENST00000585096 RPL17P18621 184 aaKnown RBP19.54■□□□□ 0.72
SRSF1-209ENST00000585096 MCL1Q07820 350 aa19.54■□□□□ 0.72
SRSF1-209ENST00000585096 PSMD5Q16401 504 aa19.54■□□□□ 0.72
SRSF1-209ENST00000585096 SPECC1Q5M775 1068 aa19.54■□□□□ 0.72
SRSF1-209ENST00000585096 SPATA31D4Q6ZUB0 917 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms