RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 TMEM150BA6NC51 233 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 PP2D1A8MPX8 630 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 LYPLA2O95372 231 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 WISP1O95388 367 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 SMIM10L2AP0DMW4 78 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 SMIM10L2BP0DMW5 78 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 INSRRP14616 1297 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 ITGB8P26012 769 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 MARK3P27448 753 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 RPA1P27694 616 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 MARCKSP29966 332 aaPredicted RBP6.3□□□□□ -1.4
CDH8-213ENST00000584966 CDC25AP30304 524 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 QARSP47897 775 aaKnown RBP6.3□□□□□ -1.4
CDH8-213ENST00000584966 JAK3P52333 1124 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 NUCB2P80303 420 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 CEBPZQ03701 1054 aaKnown RBP6.3□□□□□ -1.4
CDH8-213ENST00000584966 TLE2Q04725 743 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 PTPN11Q06124 597 aaPredicted RBP6.3□□□□□ -1.4
CDH8-213ENST00000584966 CTTNQ14247 550 aaKnown RBP6.3□□□□□ -1.4
CDH8-213ENST00000584966 GPNMBQ14956 572 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 TRIM71Q2Q1W2 868 aaKnown RBP6.3□□□□□ -1.4
CDH8-213ENST00000584966 TRIM60Q495X7 471 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 HYIQ5T013 277 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 AXDND1Q5T1B0 1012 aaPredicted RBP6.3□□□□□ -1.4
CDH8-213ENST00000584966 NCAPH2Q6IBW4 605 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 DTHD1Q6ZMT9 781 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 USP49Q70CQ1 688 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 ANO5Q75V66 913 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 MAP4K3Q8IVH8 894 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 C4orf19Q8IY42 314 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 LINC01465Q8N7H1 131 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 SNX29Q8TEQ0 813 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 ATP8B4Q8TF62 1192 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 DHX38Q92620 1227 aaKnown RBP6.3□□□□□ -1.4
CDH8-213ENST00000584966 VWCEQ96DN2 955 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 ZBTB10Q96DT7 871 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 CLIC6Q96NY7 704 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 POLR3CQ9BUI4 534 aaPredicted RBP6.3□□□□□ -1.4
CDH8-213ENST00000584966 KATNAL1Q9BW62 490 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 SEZ6LQ9BYH1 1024 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 TGIF2Q9GZN2 237 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 TRPV6Q9H1D0 765 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 PDLIM7Q9NR12 457 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 TRMT13Q9NUP7 481 aaKnown RBP6.3□□□□□ -1.4
CDH8-213ENST00000584966 SETD4Q9NVD3 440 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 FNDC3AQ9Y2H6 1198 aaKnown RBP6.3□□□□□ -1.4
CDH8-213ENST00000584966 USP20Q9Y2K6 914 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 SRPRBQ9Y5M8 271 aaKnown RBP6.3□□□□□ -1.4
CDH8-213ENST00000584966 CHD9Q3L8U1 2897 aa6.3□□□□□ -1.4
CDH8-213ENST00000584966 IGKV6-21A0A0C4DH24 114 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 VWA3AA6NCI4 1184 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 TRIM43BA6NCK2 446 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 GIPC1O14908 333 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 KIAA0355O15063 1070 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 MARCH6O60337 910 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 HBP1O60381 514 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 PPP6R2O75170 966 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 YEATS4O95619 227 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 BMP15O95972 392 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 EIF4BP23588 611 aaKnown RBP6.29□□□□□ -1.4
CDH8-213ENST00000584966 SLC26A2P50443 739 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 NRLP54845 237 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 PSMC5P62195 406 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 PRKCEQ02156 737 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 CYP4A11Q02928 519 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 GRB10Q13322 594 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.29□□□□□ -1.4
CDH8-213ENST00000584966 FAM160B1Q5W0V3 765 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 ATL3Q6DD88 541 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 RUFY4Q6ZNE9 571 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 ACAD11Q709F0 780 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 KCNK18Q7Z418 384 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 LMBR1Q8WVP7 490 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 TRAPPC12Q8WVT3 735 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 GLG1Q92896 1179 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 CCDC74AQ96AQ1 378 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 TRIM43Q96BQ3 446 aaPredicted RBP6.29□□□□□ -1.4
CDH8-213ENST00000584966 ZNF396Q96N95 335 aaPredicted RBP6.29□□□□□ -1.4
CDH8-213ENST00000584966 SH2D3AQ9BRG2 576 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 LXNQ9BS40 222 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 OSBPL7Q9BZF2 842 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 CSRNP2Q9H175 543 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 AZI2Q9H6S1 392 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 TUFT1Q9NNX1 390 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 LRWD1Q9UFC0 647 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 TBX21Q9UL17 535 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 PCDHA7Q9UN72 937 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 SAMM50Q9Y512 469 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 COL1A2P08123 1366 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 CDH23Q9H251 3354 aa6.29□□□□□ -1.4
CDH8-213ENST00000584966 UMODL1Q5DID0 1318 aa6.28□□□□□ -1.4
CDH8-213ENST00000584966 NRCAMQ92823 1304 aa6.28□□□□□ -1.4
CDH8-213ENST00000584966 REV3LO60673 3130 aa6.28□□□□□ -1.4
CDH8-213ENST00000584966 CHD7Q9P2D1 2997 aa6.28□□□□□ -1.4
CDH8-213ENST00000584966 TRANK1O15050 2925 aa6.28□□□□□ -1.4
CDH8-213ENST00000584966 A0A087X0B3 334 aa6.28□□□□□ -1.4
CDH8-213ENST00000584966 C17orf102A2RUQ5 167 aa6.28□□□□□ -1.4
CDH8-213ENST00000584966 SPTLC2O15270 562 aa6.28□□□□□ -1.4
CDH8-213ENST00000584966 PQBP1O60828 265 aaKnown RBP6.28□□□□□ -1.4
CDH8-213ENST00000584966 C22orf31O95567 290 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms