RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 NOVA2Q9UNW9 492 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 V9GY48 417 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 FRMPD2Q68DX3 1309 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 WNT10BO00744 389 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ADAMTS3O15072 1205 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CBFA2T3O75081 653 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ZBED4O75132 1171 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 DEXIO95424 95 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 IDEP14735 1019 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 GM2AP17900 193 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CASP1P29466 404 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SHMT1P34896 483 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 TUBA4AP68366 448 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ZBTB17Q13105 803 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ANKDD1AQ495B1 522 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 PPP2R2DQ66LE6 453 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 Q6ZNX1 250 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 RETREG2Q8NC44 543 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 PPP1R14CQ8TAE6 165 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SPATA20Q8TB22 786 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 UTP4Q969X6 686 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CSRNP1Q96S65 589 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 TMEM47Q9BQJ4 181 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 FAM114A2Q9NRY5 505 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 REXO2Q9Y3B8 237 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 MYH1P12882 1939 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 GOLGA8TH3BQL2 631 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 DDNO94850 711 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 HSPA9P38646 679 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 RGS2P41220 211 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 FXR1P51114 621 aaKnown RBP eCLIP12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 MAGOHP61326 146 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 WASHC5Q12768 1159 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 TROAPQ12815 778 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 PNMA1Q8ND90 353 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SCG3Q8WXD2 468 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 MAGOHBQ96A72 148 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ITPKCQ96DU7 683 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 NSRP1Q9H0G5 558 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 PARVGQ9HBI0 331 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 GDF3Q9NR23 364 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CNOT7Q9UIV1 285 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 KIAA1257Q9ULG3 409 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 DIS3Q9Y2L1 958 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 HBS1LQ9Y450 684 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 LOC105371267A0A1B0GV96 52 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 RASA4BC9J798 803 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 RASA4O43374 803 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ADAM23O75077 832 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CYP1A2P05177 515 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 TGFB3P10600 412 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CD44P16070 742 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CYTH1Q15438 398 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SPATA1Q5VX52 437 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 APTXQ7Z2E3 356 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 PHLDB2Q86SQ0 1253 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SRBD1Q8N5C6 995 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CCDC110Q8TBZ0 833 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 MDM1Q8TC05 714 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SHISA4Q96DD7 197 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 MYOZ2Q9NPC6 264 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 MYO3BQ8WXR4 1341 aa12.65□□□□□ -0.38
CDK5RAP3-232ENST00000584168 A0A087X0B3 334 aa12.65□□□□□ -0.39
CDK5RAP3-232ENST00000584168 LINC00854A0A1B0GVQ3 168 aa12.65□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SMIM23A6NLE4 172 aa12.65□□□□□ -0.39
CDK5RAP3-232ENST00000584168 GYPCP04921 128 aa12.65□□□□□ -0.39
CDK5RAP3-232ENST00000584168 MZF1P28698 734 aaPredicted RBP12.65□□□□□ -0.39
CDK5RAP3-232ENST00000584168 PRKG1Q13976 671 aa12.65□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CTC1Q2NKJ3 1217 aa12.65□□□□□ -0.39
CDK5RAP3-232ENST00000584168 PARP6Q2NL67 630 aa12.65□□□□□ -0.39
CDK5RAP3-232ENST00000584168 TMTC4Q5T4D3 741 aa12.65□□□□□ -0.39
CDK5RAP3-232ENST00000584168 NLRP9Q7RTR0 991 aa12.65□□□□□ -0.39
CDK5RAP3-232ENST00000584168 VPS36Q86VN1 386 aa12.65□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SMYD4Q8IYR2 804 aaPredicted RBP12.65□□□□□ -0.39
CDK5RAP3-232ENST00000584168 OR2W6PQ8NHA6 318 aa12.65□□□□□ -0.39
CDK5RAP3-232ENST00000584168 LRRC8CQ8TDW0 803 aa12.65□□□□□ -0.39
CDK5RAP3-232ENST00000584168 SH3TC2Q8TF17 1288 aa12.65□□□□□ -0.39
CDK5RAP3-232ENST00000584168 DYDC2Q96IM9 177 aa12.65□□□□□ -0.39
CDK5RAP3-232ENST00000584168 VPS54Q9P1Q0 977 aa12.65□□□□□ -0.39
CDK5RAP3-232ENST00000584168 PNMA3Q9UL41 463 aa12.65□□□□□ -0.39
CDK5RAP3-232ENST00000584168 EPN1Q9Y6I3 576 aaPredicted RBP12.65□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CDK5RAP2Q96SN8 1893 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 FAM205CA6NFA0 338 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 FAM47E-STBD1D6RA91 191 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ADCY3O60266 1144 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 NDUFA10O95299 355 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ZBED1O96006 694 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CCNB1P14635 433 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 S100A5P33763 92 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 EPS15P42566 896 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 RNASELQ05823 741 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ZNF844Q08AG5 666 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 NR1D2Q14995 579 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CCDC6Q16204 474 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 VASH1Q7L8A9 365 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ZBED8Q8IZ13 594 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 CEP70Q8NHQ1 597 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 DCLRE1BQ9H816 532 aa12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 ADD3Q9UEY8 706 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-232ENST00000584168 HDAC9Q9UKV0 1011 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms