RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	SHH	Q15465	462 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ANO6	Q4KMQ2	910 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CLLU1OS	Q5K130	101 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CDKAL1	Q5VV42	579 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	OTOP2	Q7RTS6	562 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	FRMD5	Q7Z6J6	570 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	NT5DC4	Q86YG4	428 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CBWD2	Q8IUF1	395 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	DHX40	Q8IX18	779 aa	Known RBP	10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	TMC2	Q8TDI7	906 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	PARD3B	Q8TEW8	1205 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	BICD1	Q96G01	975 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	DDX27	Q96GQ7	796 aa	Known RBP	10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	SNX27	Q96L92	541 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ACAP3	Q96P50	834 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CASD1	Q96PB1	797 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	SLC9A7	Q96T83	725 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	DNAJC25	Q9H1X3	360 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CXCL16	Q9H2A7	254 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	THAP9	Q9H5L6	903 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	SNTG2	Q9NY99	539 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	DERA	Q9Y315	318 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	HES2	Q9Y543	173 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054		A0A1W2PPC1	479 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ZNF233	A6NK53	670 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	TRIM66	O15016	1216 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CETN3	O15182	167 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	HOXA2	O43364	376 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	RECQL4	O94761	1208 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	EFEMP2	O95967	443 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	AMH	P03971	560 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ITGA4	P13612	1032 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	PSMC2	P35998	433 aa	Known RBP	10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ACOT2	P49753	483 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	AFF1	P51825	1210 aa	Known RBP	10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CYP24A1	Q07973	514 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	DSC1	Q08554	894 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	SNRNP35	Q16560	246 aa	Known RBP	10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	C15orf39	Q6ZRI6	1047 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	APTX	Q7Z2E3	356 aa	Known RBP	10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ZBTB33	Q86T24	672 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	NOC3L	Q8WTT2	800 aa	Known RBP	10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ZMAT2	Q96NC0	199 aa	Known RBP	10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	PPP1R10	Q96QC0	940 aa	Known RBP	10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	TSG101	Q99816	390 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	TCHP	Q9BT92	498 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CCDC94	Q9BW85	323 aa	Predicted RBP	10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	TMEM117	Q9H0C3	514 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	PCIF1	Q9H4Z3	704 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	MIOS	Q9NXC5	875 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ANKFY1	Q9P2R3	1169 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CTNND2	Q9UQB3	1225 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	C2CD2	Q9Y426	696 aa		10.85	□□□□□ -0.67
EIF4A1-231	ENST00000584054	SMIM28	A0A1B0GU29	152 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ARL5C	A6NH57	179 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	LACTBL1	A8MY62	500 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	EXOC3	O60645	756 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	IL18RAP	O95256	599 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	GNA14	O95837	355 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CYP3A5	P20815	502 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ZNF165	P49910	485 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	STX17	P56962	302 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	MYL5	Q02045	173 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	SURF1	Q15526	300 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	SEZ6	Q53EL9	994 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	KLHL10	Q6JEL2	608 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	INTS8	Q75QN2	995 aa	Known RBP	10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	HERC6	Q8IVU3	1022 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	TRIM59	Q8IWR1	403 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	THNSL1	Q8IYQ7	743 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	HACE1	Q8IYU2	909 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CSGALNACT2	Q8N6G5	542 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CLP1	Q92989	425 aa	Known RBP	10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	LPP	Q93052	612 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	SAAL1	Q96ER3	474 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	FAM213A	Q9BRX8	229 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	SRRT	Q9BXP5	876 aa	Known RBP	10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	TRIM6	Q9C030	488 aa	Predicted RBP	10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	NAT10	Q9H0A0	1025 aa	Known RBP	10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	MTIF3	Q9H2K0	278 aa	Known RBP	10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	RSAD1	Q9HA92	442 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	METTL14	Q9HCE5	456 aa	Known RBP	10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	TOPORS	Q9NS56	1045 aa	Predicted RBP	10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	PCDHB7	Q9Y5E2	793 aa		10.84	□□□□□ -0.67
EIF4A1-231	ENST00000584054	RALGAPA2	Q2PPJ7	1873 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	FGFR1OP	O95684	399 aa	Known RBP	10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	CXCL8	P10145	99 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	AKAP5	P24588	427 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	LRPAP1	P30533	357 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	GTF2H1	P32780	548 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	CYP2J2	P51589	502 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	NOMO2	Q5JPE7	1267 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	CD300LG	Q6UXG3	332 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	EFCAB13	Q8IY85	973 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	CMTR2	Q8IYT2	770 aa	Known RBP	10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	FAM200A	Q8TCP9	573 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	ZNF516	Q92618	1163 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	SLC35C1	Q96A29	364 aa		10.83	□□□□□ -0.68
EIF4A1-231	ENST00000584054	GAD1	Q99259	594 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms