RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 MAGEC2Q9UBF1 373 aaPredicted RBP12.67□□□□□ -0.38
CDRT1-207ENST00000583965 PARP2Q9UGN5 583 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 ARMCX3Q9UH62 379 aaPredicted RBP12.67□□□□□ -0.38
CDRT1-207ENST00000583965 LRFN2Q9ULH4 789 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 HES2Q9Y543 173 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.67□□□□□ -0.38
CDRT1-207ENST00000583965 SCN1AP35498 2009 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 TTC26A0AVF1 554 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 GOLGA6L19H0YKK7 550 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 INPPL1O15357 1258 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 CXCL8P10145 99 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 AKAP5P24588 427 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 EEF1GP26641 437 aaKnown RBP12.66□□□□□ -0.38
CDRT1-207ENST00000583965 EPHB4P54760 987 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 PPP2R3AQ06190 1150 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 BFSP1Q12934 665 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 PSMD6Q15008 389 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 SLC10A6Q3KNW5 377 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 SEZ6Q53EL9 994 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 XKR4Q5GH76 650 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 ALKAL1Q6UXT8 129 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 AGMOQ6ZNB7 445 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 OTOP2Q7RTS6 562 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 LUZP1Q86V48 1076 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 NT5DC4Q86YG4 428 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 IRF2BP1Q8IU81 584 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 TMEM192Q8IY95 271 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 CRIPAKQ8N1N5 446 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 TOP1MTQ969P6 601 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 EEF2KMTQ96G04 330 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 BORCS6Q96GS4 357 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 SNX27Q96L92 541 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 CNOT6LQ96LI5 555 aaKnown RBP12.66□□□□□ -0.38
CDRT1-207ENST00000583965 APOL6Q9BWW8 343 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 RNF39Q9H2S5 420 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 RSAD1Q9HA92 442 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 FANCLQ9NW38 375 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 CNTN3Q9P232 1028 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 DERAQ9Y315 318 aa12.66□□□□□ -0.38
CDRT1-207ENST00000583965 ZBBXA8MT70 800 aa12.65□□□□□ -0.38
CDRT1-207ENST00000583965 KCNJ18B7U540 433 aa12.65□□□□□ -0.38
CDRT1-207ENST00000583965 PRKCSHP14314 528 aaPredicted RBP12.65□□□□□ -0.38
CDRT1-207ENST00000583965 KCNE1P15382 129 aa12.65□□□□□ -0.38
CDRT1-207ENST00000583965 ZNF18P17022 549 aa12.65□□□□□ -0.38
CDRT1-207ENST00000583965 VAMP7P51809 220 aa12.65□□□□□ -0.38
CDRT1-207ENST00000583965 KCNJ12Q14500 433 aa12.65□□□□□ -0.38
CDRT1-207ENST00000583965 TCP11X2Q5H9J9 407 aa12.65□□□□□ -0.38
CDRT1-207ENST00000583965 GLB1LQ6UWU2 654 aa12.65□□□□□ -0.38
CDRT1-207ENST00000583965 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.65□□□□□ -0.38
CDRT1-207ENST00000583965 TRIM59Q8IWR1 403 aa12.65□□□□□ -0.38
CDRT1-207ENST00000583965 RNF169Q8NCN4 708 aa12.65□□□□□ -0.38
CDRT1-207ENST00000583965 ANKRD20A12PQ8NF67 263 aa12.65□□□□□ -0.38
CDRT1-207ENST00000583965 PHOSPHO2Q8TCD6 241 aa12.65□□□□□ -0.38
CDRT1-207ENST00000583965 PARD3BQ8TEW8 1205 aa12.65□□□□□ -0.38
CDRT1-207ENST00000583965 LPPQ93052 612 aa12.65□□□□□ -0.38
CDRT1-207ENST00000583965 FNBP1Q96RU3 617 aa12.65□□□□□ -0.38
CDRT1-207ENST00000583965 RPS6KC1Q96S38 1066 aa12.65□□□□□ -0.38
CDRT1-207ENST00000583965 SLC9A7Q96T83 725 aa12.65□□□□□ -0.38
CDRT1-207ENST00000583965 GDF15Q99988 308 aa12.65□□□□□ -0.38
CDRT1-207ENST00000583965 SAMSN1Q9NSI8 373 aaKnown RBP12.65□□□□□ -0.38
CDRT1-207ENST00000583965 KANSL3Q9P2N6 904 aa12.65□□□□□ -0.38
CDRT1-207ENST00000583965 C2CD2Q9Y426 696 aa12.65□□□□□ -0.38
CDRT1-207ENST00000583965 ARL5CA6NH57 179 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 LACTBL1A8MY62 500 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 H0YGN5 161 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 XPOTO43592 962 aaKnown RBP12.64□□□□□ -0.39
CDRT1-207ENST00000583965 STX10O60499 249 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 OFD1O75665 1012 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 CAPN15O75808 1086 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 TPM2P07951 284 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 CDK11BP21127 795 aaKnown RBP12.64□□□□□ -0.39
CDRT1-207ENST00000583965 MTIF2P46199 727 aaKnown RBP12.64□□□□□ -0.39
CDRT1-207ENST00000583965 AP3M2P53677 418 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 CLDN10P78369 228 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 DEFB103AP81534 67 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 MLLT1Q03111 559 aaPredicted RBP12.64□□□□□ -0.39
CDRT1-207ENST00000583965 RASIP1Q5U651 963 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 WDR49Q8IV35 697 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 ABI1Q8IZP0 508 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 URGCPQ8TCY9 931 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 CACTINQ8WUQ7 758 aaKnown RBP12.64□□□□□ -0.39
CDRT1-207ENST00000583965 FAM212AQ96EL1 285 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 CGRRF1Q99675 332 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 TMEM117Q9H0C3 514 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 HSD3B7Q9H2F3 369 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 PDE11AQ9HCR9 933 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 RNF19AQ9NV58 838 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 PCDH10Q9P2E7 1040 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 SLC4A7Q9Y6M7 1214 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 COL4A6Q14031 1691 aa12.64□□□□□ -0.39
CDRT1-207ENST00000583965 MEIS3P2A8K0S8 358 aa12.63□□□□□ -0.39
CDRT1-207ENST00000583965 RBAK-RBAKDNI3L0D1 243 aa12.63□□□□□ -0.39
CDRT1-207ENST00000583965 MEFVO15553 781 aaPredicted RBP12.63□□□□□ -0.39
CDRT1-207ENST00000583965 THP07101 528 aa12.63□□□□□ -0.39
CDRT1-207ENST00000583965 IBSPP21815 317 aaPredicted RBP12.63□□□□□ -0.39
CDRT1-207ENST00000583965 GTF2H1P32780 548 aa12.63□□□□□ -0.39
CDRT1-207ENST00000583965 BMP8BP34820 402 aa12.63□□□□□ -0.39
CDRT1-207ENST00000583965 MLH1P40692 756 aa12.63□□□□□ -0.39
CDRT1-207ENST00000583965 GRIK3Q13003 919 aa12.63□□□□□ -0.39
CDRT1-207ENST00000583965 TMEM132DQ14C87 1099 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms