RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 MEIS3P2A8K0S8 358 aa14.83□□□□□ -0.04
ITGB4-209ENST00000583327 RECQL4O94761 1208 aa14.83□□□□□ -0.04
ITGB4-209ENST00000583327 CXCL8P10145 99 aa14.83□□□□□ -0.04
ITGB4-209ENST00000583327 PRKCSHP14314 528 aaPredicted RBP14.83□□□□□ -0.04
ITGB4-209ENST00000583327 KCNE1P15382 129 aa14.83□□□□□ -0.04
ITGB4-209ENST00000583327 CDK11BP21127 795 aaKnown RBP14.83□□□□□ -0.04
ITGB4-209ENST00000583327 GTF2H1P32780 548 aa14.83□□□□□ -0.04
ITGB4-209ENST00000583327 COPB1P53618 953 aaKnown RBP14.83□□□□□ -0.04
ITGB4-209ENST00000583327 EPHB4P54760 987 aa14.83□□□□□ -0.04
ITGB4-209ENST00000583327 OSTNP61366 133 aa14.83□□□□□ -0.04
ITGB4-209ENST00000583327 PPIGQ13427 754 aaKnown RBP eCLIP14.83□□□□□ -0.04
ITGB4-209ENST00000583327 NR1I3Q14994 352 aa14.83□□□□□ -0.04
ITGB4-209ENST00000583327 MAN2A1Q16706 1144 aa14.83□□□□□ -0.04
ITGB4-209ENST00000583327 CCDC40Q4G0X9 1142 aa14.83□□□□□ -0.04
ITGB4-209ENST00000583327 PGBD4Q96DM1 585 aa14.83□□□□□ -0.04
ITGB4-209ENST00000583327 SNX27Q96L92 541 aa14.83□□□□□ -0.04
ITGB4-209ENST00000583327 NAP1L5Q96NT1 182 aaPredicted RBP14.83□□□□□ -0.04
ITGB4-209ENST00000583327 TRIM6Q9C030 488 aaPredicted RBP14.83□□□□□ -0.04
ITGB4-209ENST00000583327 PDE11AQ9HCR9 933 aa14.83□□□□□ -0.04
ITGB4-209ENST00000583327 UBN1Q9NPG3 1134 aa14.83□□□□□ -0.04
ITGB4-209ENST00000583327 RTN4Q9NQC3 1192 aaKnown RBP14.83□□□□□ -0.04
ITGB4-209ENST00000583327 TMEM161AQ9NX61 479 aa14.83□□□□□ -0.04
ITGB4-209ENST00000583327 MAGEC2Q9UBF1 373 aaPredicted RBP14.83□□□□□ -0.04
ITGB4-209ENST00000583327 DERAQ9Y315 318 aa14.83□□□□□ -0.04
ITGB4-209ENST00000583327 GOLGA6L3A6NEY3 463 aa14.82□□□□□ -0.04
ITGB4-209ENST00000583327 LRRIQ3A6PVS8 624 aaPredicted RBP14.82□□□□□ -0.04
ITGB4-209ENST00000583327 EFCAB14O75071 495 aa14.82□□□□□ -0.04
ITGB4-209ENST00000583327 BAIAP3O94812 1187 aa14.82□□□□□ -0.04
ITGB4-209ENST00000583327 C4BPAP04003 597 aaKnown RBP14.82□□□□□ -0.04
ITGB4-209ENST00000583327 ITGA4P13612 1032 aa14.82□□□□□ -0.04
ITGB4-209ENST00000583327 KRT13P13646 458 aa14.82□□□□□ -0.04
ITGB4-209ENST00000583327 AKAP5P24588 427 aa14.82□□□□□ -0.04
ITGB4-209ENST00000583327 FPGSQ05932 587 aa14.82□□□□□ -0.04
ITGB4-209ENST00000583327 PPP3CAQ08209 521 aa14.82□□□□□ -0.04
ITGB4-209ENST00000583327 KCNH2Q12809 1159 aa14.82□□□□□ -0.04
ITGB4-209ENST00000583327 VWA3BQ502W6 1294 aa14.82□□□□□ -0.04
ITGB4-209ENST00000583327 TMEM240Q5SV17 173 aa14.82□□□□□ -0.04
ITGB4-209ENST00000583327 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.82□□□□□ -0.04
ITGB4-209ENST00000583327 NT5DC4Q86YG4 428 aa14.82□□□□□ -0.04
ITGB4-209ENST00000583327 HACE1Q8IYU2 909 aa14.82□□□□□ -0.04
ITGB4-209ENST00000583327 TET1Q8NFU7 2136 aa14.82□□□□□ -0.04
ITGB4-209ENST00000583327 DPF3Q92784 378 aa14.82□□□□□ -0.04
ITGB4-209ENST00000583327 ZMAT2Q96NC0 199 aaKnown RBP14.82□□□□□ -0.04
ITGB4-209ENST00000583327 POP1Q99575 1024 aaKnown RBP14.82□□□□□ -0.04
ITGB4-209ENST00000583327 NDST4Q9H3R1 872 aa14.82□□□□□ -0.04
ITGB4-209ENST00000583327 GRPEL1Q9HAV7 217 aa14.82□□□□□ -0.04
ITGB4-209ENST00000583327 COQ4Q9Y3A0 265 aa14.82□□□□□ -0.04
ITGB4-209ENST00000583327 C2CD2Q9Y426 696 aa14.82□□□□□ -0.04
ITGB4-209ENST00000583327 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.82□□□□□ -0.04
ITGB4-209ENST00000583327 SMIM28A0A1B0GU29 152 aa14.81□□□□□ -0.04
ITGB4-209ENST00000583327 PTGESO14684 152 aa14.81□□□□□ -0.04
ITGB4-209ENST00000583327 OFD1O75665 1012 aa14.81□□□□□ -0.04
ITGB4-209ENST00000583327 ACRP10323 421 aa14.81□□□□□ -0.04
ITGB4-209ENST00000583327 SYN1P17600 705 aa14.81□□□□□ -0.04
ITGB4-209ENST00000583327 MTIF2P46199 727 aaKnown RBP14.81□□□□□ -0.04
ITGB4-209ENST00000583327 AP3M2P53677 418 aa14.81□□□□□ -0.04
ITGB4-209ENST00000583327 NAB2Q15742 525 aa14.81□□□□□ -0.04
ITGB4-209ENST00000583327 WDR49Q8IV35 697 aa14.81□□□□□ -0.04
ITGB4-209ENST00000583327 EFCAB13Q8IY85 973 aa14.81□□□□□ -0.04
ITGB4-209ENST00000583327 CXorf38Q8TB03 319 aa14.81□□□□□ -0.04
ITGB4-209ENST00000583327 LPPQ93052 612 aa14.81□□□□□ -0.04
ITGB4-209ENST00000583327 TOP1MTQ969P6 601 aa14.81□□□□□ -0.04
ITGB4-209ENST00000583327 CCDC127Q96BQ5 260 aa14.81□□□□□ -0.04
ITGB4-209ENST00000583327 CGRRF1Q99675 332 aa14.81□□□□□ -0.04
ITGB4-209ENST00000583327 VPS16Q9H269 839 aa14.81□□□□□ -0.04
ITGB4-209ENST00000583327 TOPORSQ9NS56 1045 aaPredicted RBP14.81□□□□□ -0.04
ITGB4-209ENST00000583327 INTS13Q9NVM9 706 aa14.81□□□□□ -0.04
ITGB4-209ENST00000583327 RNF216Q9NWF9 866 aaPredicted RBP14.81□□□□□ -0.04
ITGB4-209ENST00000583327 MIOSQ9NXC5 875 aa14.81□□□□□ -0.04
ITGB4-209ENST00000583327 TAB2Q9NYJ8 693 aa14.81□□□□□ -0.04
ITGB4-209ENST00000583327 PCDH10Q9P2E7 1040 aa14.81□□□□□ -0.04
ITGB4-209ENST00000583327 PTPRJQ12913 1337 aa14.81□□□□□ -0.04
ITGB4-209ENST00000583327 ARL5CA6NH57 179 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 LGALS16A8MUM7 142 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 P4HA2O15460 535 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 FGBP02675 491 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 AFPP02771 609 aaKnown RBP14.8□□□□□ -0.04
ITGB4-209ENST00000583327 TRIM49P0CI25 452 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 TRIM49CP0CI26 452 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 PBX1P40424 430 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 AFF1P51825 1210 aaKnown RBP14.8□□□□□ -0.04
ITGB4-209ENST00000583327 YARSP54577 528 aaKnown RBP14.8□□□□□ -0.04
ITGB4-209ENST00000583327 ZACNQ401N2 412 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 CLLU1OSQ5K130 101 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 RASIP1Q5U651 963 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 DPY19L2P1Q6NXN4 242 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 ZNF365Q70YC5 407 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 SV2AQ7L0J3 742 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 USP37Q86T82 979 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 NPAS4Q8IUM7 802 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 ANKRD20A12PQ8NF67 263 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 OR5B17Q8NGF7 314 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 RSPH1Q8WYR4 309 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 HERVK_113Q902F9 699 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 PPP1R10Q96QC0 940 aaKnown RBP14.8□□□□□ -0.04
ITGB4-209ENST00000583327 TMEM117Q9H0C3 514 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 PARP2Q9UGN5 583 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 ZMYND8Q9ULU4 1186 aaPredicted RBP14.8□□□□□ -0.04
ITGB4-209ENST00000583327 NR2E3Q9Y5X4 410 aa14.8□□□□□ -0.04
ITGB4-209ENST00000583327 GTPBP10A4D1E9 387 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms