RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	NRG2	O14511	850 aa	Predicted RBP	5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	GPR182	O15218	404 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	RPS6KA5	O75582	802 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	C1S	P09871	688 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	FAM87A	P0C7U9	286 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	CYP2D6	P10635	497 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	KPNA1	P52294	538 aa	Predicted RBP	5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	DSG1	Q02413	1049 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	PTH1R	Q03431	593 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	SCRN1	Q12765	414 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	PPFIA1	Q13136	1202 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	SKIDA1	Q1XH10	827 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	FAM78A	Q5JUQ0	283 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	CCDC81	Q6ZN84	652 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	RTL10	Q7L3V2	364 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	ECHDC2	Q86YB7	292 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	NME8	Q8N427	588 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	FAM200A	Q8TCP9	573 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	NSUN6	Q8TEA1	469 aa	Known RBP	5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	MARVELD3	Q96A59	401 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	ACD	Q96AP0	544 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	NAF1	Q96HR8	494 aa	Known RBP	5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	NRDE2	Q9H7Z3	1164 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	PRDM16	Q9HAZ2	1276 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	ST3GAL5	Q9UNP4	418 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	INVS	Q9Y283	1065 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	NOC2L	Q9Y3T9	749 aa	Known RBP	5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	ESPL1	Q14674	2120 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	BIRC6	Q9NR09	4857 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	COL1A2	P08123	1366 aa		5.8	□□□□□ -1.48
MSI2-216	ENST00000582772	MN1	Q10571	1320 aa	Predicted RBP	5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	RNF40	O75150	1001 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	SEMA7A	O75326	666 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	SSB	P05455	408 aa	Known RBP eCLIP	5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	MYB	P10242	640 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	SLC11A1	P49279	550 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	GLUD2	P49448	558 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	KRT76	Q01546	638 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	SP2	Q02086	613 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	CREM	Q03060	361 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	GRIK2	Q13002	908 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	DMC1	Q14565	340 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	GRM4	Q14833	912 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	GRIK4	Q16099	956 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	SLC5A9	Q2M3M2	681 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	C12orf60	Q5U649	245 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	SLFN13	Q68D06	897 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	CAPRIN2	Q6IMN6	1127 aa	Known RBP	5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	FBXL19	Q6PCT2	694 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	TRIM50	Q86XT4	487 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	LSMEM2	Q8N112	164 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	HELQ	Q8TDG4	1101 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	RHBDD1	Q8TEB9	315 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	TMEM40	Q8WWA1	233 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	ING5	Q8WYH8	240 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	SMARCD2	Q92925	531 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	E2F7	Q96AV8	911 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	MCRS1	Q96EZ8	462 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	SPACA7	Q96KW9	195 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	TMEM209	Q96SK2	561 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	ARHGAP9	Q9BRR9	750 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	CRNKL1	Q9BZJ0	848 aa	Known RBP	5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	TPSD1	Q9BZJ3	242 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	ADNP	Q9H2P0	1102 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	CHST7	Q9NS84	486 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	SMC4	Q9NTJ3	1288 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	POLR3B	Q9NW08	1133 aa	Predicted RBP	5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	DNMT3B	Q9UBC3	853 aa	Known RBP	5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	MRPS23	Q9Y3D9	190 aa	Known RBP	5.79	□□□□□ -1.48
MSI2-216	ENST00000582772	PLIN4	Q96Q06	1357 aa		5.79	□□□□□ -1.48
MSI2-216	ENST00000582772		A0A0U1RQF3	1178 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	CENPB	P07199	599 aa	Predicted RBP	5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	CEBPB	P17676	345 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	ASIC1	P78348	528 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	TWISTNB	Q3B726	338 aa	Predicted RBP	5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	FBXO43	Q4G163	708 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	ZNF484	Q5JVG2	852 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	PRSS36	Q5K4E3	855 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	LIN9	Q5TKA1	542 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	FSTL4	Q6MZW2	842 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	IGF2-AS	Q6U949	168 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	USP49	Q70CQ1	688 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	ARMCX6	Q7L4S7	300 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	TAOK1	Q7L7X3	1001 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	PALB2	Q86YC2	1186 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	ENGASE	Q8NFI3	743 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	TSTD1	Q8NFU3	115 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	RFFL	Q8WZ73	363 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	TMEM131	Q92545	1883 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	EXTL1	Q92935	676 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	ZNF512B	Q96KM6	892 aa	Predicted RBP	5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	LURAP1	Q96LR2	239 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	TMUB1	Q9BVT8	246 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	COPRS	Q9NQ92	184 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	TM7SF3	Q9NS93	570 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	TBC1D13	Q9NVG8	400 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	HCFC1R1	Q9NWW0	138 aa		5.78	□□□□□ -1.48
MSI2-216	ENST00000582772	CLIP2	Q9UDT6	1046 aa		5.78	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms