RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 ZFP42Q96MM3 310 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 MINDY3Q9H8M7 445 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 NPDC1Q9NQX5 325 aaPredicted RBP8.5□□□□□ -1.05
CCDC47-205ENST00000582331 SH2B1Q9NRF2 756 aaPredicted RBP8.5□□□□□ -1.05
CCDC47-205ENST00000582331 SEMA4GQ9NTN9 838 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 FBXW11Q9UKB1 542 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 ADAM28Q9UKQ2 775 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 BRPF3Q9ULD4 1205 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 SPTBN2O15020 2390 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 CACNA1GO43497 2377 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 MAN2B1O00754 1011 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 EDIL3O43854 480 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 FOXD2O60548 495 aaPredicted RBP8.49□□□□□ -1.05
CCDC47-205ENST00000582331 ECI2O75521 394 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 PSMD10O75832 226 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 ERLIN2O94905 339 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 TDGF1P13385 188 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 CDC27P30260 824 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 AXLP30530 894 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 PSMC5P62195 406 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 LAMTOR4Q0VGL1 99 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 SIM2Q14190 667 aaPredicted RBP8.49□□□□□ -1.05
CCDC47-205ENST00000582331 NECTIN1Q15223 517 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 PLA2G4FQ68DD2 849 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 IL31Q6EBC2 164 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 CENPQQ7L2Z9 268 aaPredicted RBP8.49□□□□□ -1.05
CCDC47-205ENST00000582331 NPAS3Q8IXF0 933 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 HACE1Q8IYU2 909 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 TTC13Q8NBP0 860 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 BICD2Q8TD16 824 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 PSPC1Q8WXF1 523 aaKnown RBP8.49□□□□□ -1.05
CCDC47-205ENST00000582331 SLC7A3Q8WY07 619 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 GJA10Q969M2 543 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 TMEM143Q96AN5 459 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 CCDC51Q96ER9 411 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 CLSTN3Q9BQT9 956 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 IER2Q9BTL4 223 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 APOL6Q9BWW8 343 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 EIF2AQ9BY44 585 aaKnown RBP8.49□□□□□ -1.05
CCDC47-205ENST00000582331 PLA2G2FQ9BZM2 168 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 LSG1Q9H089 658 aaKnown RBP8.49□□□□□ -1.05
CCDC47-205ENST00000582331 CHRDQ9H2X0 955 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 HEBP1Q9NRV9 189 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 KCNH3Q9ULD8 1083 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 NDRG2Q9UN36 371 aaKnown RBP8.49□□□□□ -1.05
CCDC47-205ENST00000582331 GIT1Q9Y2X7 761 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 MRPS23Q9Y3D9 190 aaKnown RBP8.49□□□□□ -1.05
CCDC47-205ENST00000582331 HES2Q9Y543 173 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 SF3B1O75533 1304 aaKnown RBP eCLIP8.49□□□□□ -1.05
CCDC47-205ENST00000582331 USP24Q9UPU5 2620 aa8.49□□□□□ -1.05
CCDC47-205ENST00000582331 KLF18A0A0U1RQI7 1052 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 CCDC196A0A1B0GTZ2 297 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 SMAPO00193 183 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 ASAP2O43150 1006 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 GDF9O60383 454 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 DKC1O60832 514 aaKnown RBP eCLIP8.48□□□□□ -1.05
CCDC47-205ENST00000582331 POU2F2P09086 479 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 PMLP29590 882 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 ADD1P35611 737 aaKnown RBP8.48□□□□□ -1.05
CCDC47-205ENST00000582331 MLLT3P42568 568 aaPredicted RBP8.48□□□□□ -1.05
CCDC47-205ENST00000582331 CCR3P51677 355 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 NPEPPSP55786 919 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 SHC2P98077 582 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 EXOSC10Q01780 885 aaKnown RBP8.48□□□□□ -1.05
CCDC47-205ENST00000582331 PCBP1Q15365 356 aaKnown RBP eCLIP8.48□□□□□ -1.05
CCDC47-205ENST00000582331 PSMD5Q16401 504 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 UVSSAQ2YD98 709 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 PABPC1LQ4VXU2 614 aaKnown RBP8.48□□□□□ -1.05
CCDC47-205ENST00000582331 RTP2Q5QGT7 225 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 AXDND1Q5T1B0 1012 aaPredicted RBP8.48□□□□□ -1.05
CCDC47-205ENST00000582331 N4BP2L1Q5TBK1 243 aaPredicted RBP8.48□□□□□ -1.05
CCDC47-205ENST00000582331 FAM171A1Q5VUB5 890 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 NOTUMQ6P988 496 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 B3GNT9Q6UX72 402 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 CEP57Q86XR8 500 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 RNF149Q8NC42 400 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 LNX1Q8TBB1 728 aaPredicted RBP8.48□□□□□ -1.05
CCDC47-205ENST00000582331 TCP11Q8WWU5 503 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 ING5Q8WYH8 240 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 PIK3R5Q8WYR1 880 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 RABGGTAQ92696 567 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 DNASE1L2Q92874 299 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 MCRS1Q96EZ8 462 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 CPB2Q96IY4 423 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 CEP170P1Q96L14 293 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 TTPALQ9BTX7 342 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 TRIM6Q9C030 488 aaPredicted RBP8.48□□□□□ -1.05
CCDC47-205ENST00000582331 CSRNP2Q9H175 543 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 LMAN1LQ9HAT1 526 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 HCFC1R1Q9NWW0 138 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 GDE1Q9NZC3 331 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 DNMT3BQ9UBC3 853 aaKnown RBP8.48□□□□□ -1.05
CCDC47-205ENST00000582331 NAP1L2Q9ULW6 460 aaPredicted RBP8.48□□□□□ -1.05
CCDC47-205ENST00000582331 PPME1Q9Y570 386 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 CHD8Q9HCK8 2581 aa8.48□□□□□ -1.05
CCDC47-205ENST00000582331 BAHCC1Q9P281 2608 aa8.47□□□□□ -1.05
CCDC47-205ENST00000582331 SHISA7A6NL88 538 aa8.47□□□□□ -1.05
CCDC47-205ENST00000582331 PRPF3O43395 683 aaKnown RBP8.47□□□□□ -1.05
CCDC47-205ENST00000582331 TSPAN1O60635 241 aa8.47□□□□□ -1.05
CCDC47-205ENST00000582331 PROS1P07225 676 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms