RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 CCDC94Q9BW85 323 aaPredicted RBP24.54■■□□□ 1.52
CASC3-207ENST00000581849 CDT1Q9H211 546 aa24.54■■□□□ 1.52
CASC3-207ENST00000581849 GDAQ9Y2T3 454 aa24.54■■□□□ 1.52
CASC3-207ENST00000581849 MYH11P35749 1972 aa24.53■■□□□ 1.52
CASC3-207ENST00000581849 PLS3P13797 630 aa24.53■■□□□ 1.52
CASC3-207ENST00000581849 PROZP22891 400 aa24.53■■□□□ 1.52
CASC3-207ENST00000581849 YARSP54577 528 aaKnown RBP24.53■■□□□ 1.52
CASC3-207ENST00000581849 SLC12A3P55017 1021 aa24.53■■□□□ 1.52
CASC3-207ENST00000581849 ZNF568Q3ZCX4 644 aa24.53■■□□□ 1.52
CASC3-207ENST00000581849 XKR4Q5GH76 650 aa24.53■■□□□ 1.52
CASC3-207ENST00000581849 TAS1R3Q7RTX0 852 aa24.53■■□□□ 1.52
CASC3-207ENST00000581849 KREMEN2Q8NCW0 462 aa24.53■■□□□ 1.52
CASC3-207ENST00000581849 PPP1R10Q96QC0 940 aaKnown RBP24.53■■□□□ 1.52
CASC3-207ENST00000581849 TTPALQ9BTX7 342 aa24.53■■□□□ 1.52
CASC3-207ENST00000581849 ZDHHC7Q9NXF8 308 aa24.53■■□□□ 1.52
CASC3-207ENST00000581849 MYO10Q9HD67 2058 aa24.53■■□□□ 1.52
CASC3-207ENST00000581849 MCF2P10911 925 aa24.52■■□□□ 1.52
CASC3-207ENST00000581849 PDCP20941 246 aa24.52■■□□□ 1.52
CASC3-207ENST00000581849 SMTNP53814 917 aa24.52■■□□□ 1.52
CASC3-207ENST00000581849 ZRSR1Q15695 479 aaKnown RBP24.52■■□□□ 1.52
CASC3-207ENST00000581849 RTP2Q5QGT7 225 aa24.52■■□□□ 1.52
CASC3-207ENST00000581849 LILRA6Q6PI73 481 aa24.52■■□□□ 1.52
CASC3-207ENST00000581849 SUGP1Q8IWZ8 645 aaKnown RBP24.52■■□□□ 1.52
CASC3-207ENST00000581849 FBXL6Q8N531 539 aa24.52■■□□□ 1.52
CASC3-207ENST00000581849 RABGGTAQ92696 567 aa24.52■■□□□ 1.52
CASC3-207ENST00000581849 STAMQ92783 540 aa24.52■■□□□ 1.52
CASC3-207ENST00000581849 B3GALT6Q96L58 329 aa24.52■■□□□ 1.52
CASC3-207ENST00000581849 TRIP11Q15643 1979 aa24.51■■□□□ 1.51
CASC3-207ENST00000581849 CCDC195A0A1B0GUA6 201 aa24.51■■□□□ 1.51
CASC3-207ENST00000581849 H0YCG3 227 aa24.51■■□□□ 1.51
CASC3-207ENST00000581849 TGM5O43548 720 aa24.51■■□□□ 1.51
CASC3-207ENST00000581849 PLA2G4BP0C869 781 aa24.51■■□□□ 1.51
CASC3-207ENST00000581849 SCP2P22307 547 aa24.51■■□□□ 1.51
CASC3-207ENST00000581849 STRN3Q13033 797 aa24.51■■□□□ 1.51
CASC3-207ENST00000581849 FAM171A1Q5VUB5 890 aa24.51■■□□□ 1.51
CASC3-207ENST00000581849 DCLRE1AQ6PJP8 1040 aa24.51■■□□□ 1.51
CASC3-207ENST00000581849 MPZL3Q6UWV2 235 aa24.51■■□□□ 1.51
CASC3-207ENST00000581849 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.51■■□□□ 1.51
CASC3-207ENST00000581849 PRRX2Q99811 253 aa24.51■■□□□ 1.51
CASC3-207ENST00000581849 TARS2Q9BW92 718 aaKnown RBP24.51■■□□□ 1.51
CASC3-207ENST00000581849 CXCL16Q9H2A7 254 aa24.51■■□□□ 1.51
CASC3-207ENST00000581849 WDR6Q9NNW5 1121 aaKnown RBP24.51■■□□□ 1.51
CASC3-207ENST00000581849 SLC38A7Q9NVC3 462 aa24.51■■□□□ 1.51
CASC3-207ENST00000581849 CACNG4Q9UBN1 327 aa24.51■■□□□ 1.51
CASC3-207ENST00000581849 ZDBF2Q9HCK1 2354 aa24.5■■□□□ 1.51
CASC3-207ENST00000581849 ABLIM1O14639 778 aa24.5■■□□□ 1.51
CASC3-207ENST00000581849 SLC16A4O15374 487 aa24.5■■□□□ 1.51
CASC3-207ENST00000581849 LONP1P36776 959 aaKnown RBP24.5■■□□□ 1.51
CASC3-207ENST00000581849 UBA7P41226 1012 aa24.5■■□□□ 1.51
CASC3-207ENST00000581849 ALKAL1Q6UXT8 129 aa24.5■■□□□ 1.51
CASC3-207ENST00000581849 ZPBP2Q6X784 338 aa24.5■■□□□ 1.51
CASC3-207ENST00000581849 TMEM161BQ8NDZ6 487 aa24.5■■□□□ 1.51
CASC3-207ENST00000581849 CALML4Q96GE6 196 aa24.5■■□□□ 1.51
CASC3-207ENST00000581849 LARSQ9P2J5 1176 aaKnown RBP24.5■■□□□ 1.51
CASC3-207ENST00000581849 ODF2LQ9ULJ1 636 aa24.5■■□□□ 1.51
CASC3-207ENST00000581849 CITO14578 2027 aa24.49■■□□□ 1.51
CASC3-207ENST00000581849 SMIM28A0A1B0GU29 152 aa24.49■■□□□ 1.51
CASC3-207ENST00000581849 TOM1L1O75674 476 aa24.49■■□□□ 1.51
CASC3-207ENST00000581849 PSMD5Q16401 504 aa24.49■■□□□ 1.51
CASC3-207ENST00000581849 PALB2Q86YC2 1186 aa24.49■■□□□ 1.51
CASC3-207ENST00000581849 CEP120Q8N960 986 aa24.49■■□□□ 1.51
CASC3-207ENST00000581849 LNX1Q8TBB1 728 aaPredicted RBP24.49■■□□□ 1.51
CASC3-207ENST00000581849 HASPINQ8TF76 798 aa24.49■■□□□ 1.51
CASC3-207ENST00000581849 DDX27Q96GQ7 796 aaKnown RBP24.49■■□□□ 1.51
CASC3-207ENST00000581849 VWA8A3KMH1 1905 aa24.48■■□□□ 1.51
CASC3-207ENST00000581849 SFI1A8K8P3 1242 aa24.48■■□□□ 1.51
CASC3-207ENST00000581849 TRAPPC3O43617 180 aa24.48■■□□□ 1.51
CASC3-207ENST00000581849 MAPTP10636 758 aaKnown RBP24.48■■□□□ 1.51
CASC3-207ENST00000581849 KCNE1P15382 129 aa24.48■■□□□ 1.51
CASC3-207ENST00000581849 FGFR3P22607 806 aa24.48■■□□□ 1.51
CASC3-207ENST00000581849 UPP1Q16831 310 aa24.48■■□□□ 1.51
CASC3-207ENST00000581849 GLRA4Q5JXX5 417 aa24.48■■□□□ 1.51
CASC3-207ENST00000581849 PRSS55Q6UWB4 352 aaPredicted RBP24.48■■□□□ 1.51
CASC3-207ENST00000581849 FEZF2Q8TBJ5 459 aa24.48■■□□□ 1.51
CASC3-207ENST00000581849 SMG7Q92540 1137 aaKnown RBP24.48■■□□□ 1.51
CASC3-207ENST00000581849 ZNF707Q96C28 371 aaPredicted RBP24.48■■□□□ 1.51
CASC3-207ENST00000581849 SNX27Q96L92 541 aa24.48■■□□□ 1.51
CASC3-207ENST00000581849 ACAP3Q96P50 834 aa24.48■■□□□ 1.51
CASC3-207ENST00000581849 TCHPQ9BT92 498 aa24.48■■□□□ 1.51
CASC3-207ENST00000581849 LIMD1Q9UGP4 676 aa24.48■■□□□ 1.51
CASC3-207ENST00000581849 FBXW11Q9UKB1 542 aa24.48■■□□□ 1.51
CASC3-207ENST00000581849 CLUHO75153 1309 aa24.47■■□□□ 1.51
CASC3-207ENST00000581849 RFPL2O75678 378 aa24.47■■□□□ 1.51
CASC3-207ENST00000581849 ZMYND10O75800 440 aa24.47■■□□□ 1.51
CASC3-207ENST00000581849 B3GAT3O94766 335 aa24.47■■□□□ 1.51
CASC3-207ENST00000581849 HOXD11P31277 338 aaPredicted RBP24.47■■□□□ 1.51
CASC3-207ENST00000581849 CLCNKBP51801 687 aa24.47■■□□□ 1.51
CASC3-207ENST00000581849 PLIN2Q99541 437 aa24.47■■□□□ 1.51
CASC3-207ENST00000581849 CLSTN3Q9BQT9 956 aa24.47■■□□□ 1.51
CASC3-207ENST00000581849 PRKD2Q9BZL6 878 aa24.47■■□□□ 1.51
CASC3-207ENST00000581849 CNTN3Q9P232 1028 aa24.47■■□□□ 1.51
CASC3-207ENST00000581849 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.47■■□□□ 1.51
CASC3-207ENST00000581849 KMT2EQ8IZD2 1858 aa24.47■■□□□ 1.51
CASC3-207ENST00000581849 RPL17P18621 184 aaKnown RBP24.46■■□□□ 1.51
CASC3-207ENST00000581849 HOXA9P31269 272 aa24.46■■□□□ 1.51
CASC3-207ENST00000581849 NCKAP1LP55160 1127 aa24.46■■□□□ 1.51
CASC3-207ENST00000581849 RAD51AP2Q09MP3 1159 aa24.46■■□□□ 1.51
CASC3-207ENST00000581849 NOLC1Q14978 699 aaKnown RBP eCLIP24.46■■□□□ 1.51
CASC3-207ENST00000581849 SF3A1Q15459 793 aaKnown RBP24.46■■□□□ 1.51
CASC3-207ENST00000581849 ARSHQ5FYA8 562 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms