RNA–Protein interactions for RNA: ENST00000581416.5

ATG13-227, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-227ENST00000581416 SMC3Q9UQE7 1217 aa17.4■□□□□ 0.38
ATG13-227ENST00000581416 H3BQV1 296 aa17.39■□□□□ 0.37
ATG13-227ENST00000581416 SLC16A4O15374 487 aa17.39■□□□□ 0.37
ATG13-227ENST00000581416 ADAM12O43184 909 aa17.39■□□□□ 0.37
ATG13-227ENST00000581416 TGM5O43548 720 aa17.39■□□□□ 0.37
ATG13-227ENST00000581416 MCM2P49736 904 aa17.39■□□□□ 0.37
ATG13-227ENST00000581416 ZRSR1Q15695 479 aaKnown RBP17.39■□□□□ 0.37
ATG13-227ENST00000581416 XKR4Q5GH76 650 aa17.39■□□□□ 0.37
ATG13-227ENST00000581416 ARL6IP4Q66PJ3 421 aaKnown RBP17.39■□□□□ 0.37
ATG13-227ENST00000581416 ALKAL1Q6UXT8 129 aa17.39■□□□□ 0.37
ATG13-227ENST00000581416 C15orf39Q6ZRI6 1047 aa17.39■□□□□ 0.37
ATG13-227ENST00000581416 GPR65Q8IYL9 337 aa17.39■□□□□ 0.37
ATG13-227ENST00000581416 TMEM130Q8N3G9 435 aa17.39■□□□□ 0.37
ATG13-227ENST00000581416 TDRD5Q8NAT2 981 aaKnown RBP17.39■□□□□ 0.37
ATG13-227ENST00000581416 PRSS33Q8NF86 280 aa17.39■□□□□ 0.37
ATG13-227ENST00000581416 LNX1Q8TBB1 728 aaPredicted RBP17.39■□□□□ 0.37
ATG13-227ENST00000581416 PBXIP1Q96AQ6 731 aa17.39■□□□□ 0.37
ATG13-227ENST00000581416 ZBTB45Q96K62 511 aaPredicted RBP17.39■□□□□ 0.37
ATG13-227ENST00000581416 KMT5AQ9NQR1 393 aa17.39■□□□□ 0.37
ATG13-227ENST00000581416 LIMD1Q9UGP4 676 aa17.39■□□□□ 0.37
ATG13-227ENST00000581416 USTQ9Y2C2 406 aa17.39■□□□□ 0.37
ATG13-227ENST00000581416 SSX2IPQ9Y2D8 614 aa17.39■□□□□ 0.37
ATG13-227ENST00000581416 SF3B1O75533 1304 aaKnown RBP eCLIP17.39■□□□□ 0.372e-6■■■■■ 102.6
ATG13-227ENST00000581416 SCN1AP35498 2009 aa17.38■□□□□ 0.37
ATG13-227ENST00000581416 USP34Q70CQ2 3546 aa17.38■□□□□ 0.37
ATG13-227ENST00000581416 CCDC195A0A1B0GUA6 201 aa17.38■□□□□ 0.37
ATG13-227ENST00000581416 NR1I2O75469 434 aa17.38■□□□□ 0.37
ATG13-227ENST00000581416 TADA2AO75478 443 aa17.38■□□□□ 0.37
ATG13-227ENST00000581416 GRM5P41594 1212 aa17.38■□□□□ 0.37
ATG13-227ENST00000581416 CACNB1Q02641 598 aaPredicted RBP17.38■□□□□ 0.37
ATG13-227ENST00000581416 DMP1Q13316 513 aaPredicted RBP17.38■□□□□ 0.37
ATG13-227ENST00000581416 TMEM161BQ8NDZ6 487 aa17.38■□□□□ 0.37
ATG13-227ENST00000581416 DRC1Q96MC2 740 aa17.38■□□□□ 0.37
ATG13-227ENST00000581416 MFSD14AQ96MC6 490 aa17.38■□□□□ 0.37
ATG13-227ENST00000581416 ZMAT2Q96NC0 199 aaKnown RBP17.38■□□□□ 0.37
ATG13-227ENST00000581416 CLSTN3Q9BQT9 956 aa17.38■□□□□ 0.37
ATG13-227ENST00000581416 RHOBTB2Q9BYZ6 727 aa17.38■□□□□ 0.37
ATG13-227ENST00000581416 HAPLN2Q9GZV7 340 aa17.38■□□□□ 0.37
ATG13-227ENST00000581416 UPF2Q9HAU5 1272 aaKnown RBP17.38■□□□□ 0.37
ATG13-227ENST00000581416 BLOC1S4Q9NUP1 217 aa17.38■□□□□ 0.37
ATG13-227ENST00000581416 SORCS3Q9UPU3 1222 aa17.38■□□□□ 0.37
ATG13-227ENST00000581416 COL4A3Q01955 1670 aa17.38■□□□□ 0.37
ATG13-227ENST00000581416 TMEM189-UBE2V1I3L0A0 370 aa17.37■□□□□ 0.37
ATG13-227ENST00000581416 PLA2G4BP0C869 781 aa17.37■□□□□ 0.37
ATG13-227ENST00000581416 CLCNKBP51801 687 aa17.37■□□□□ 0.37
ATG13-227ENST00000581416 OSTNP61366 133 aa17.37■□□□□ 0.37
ATG13-227ENST00000581416 ZNF568Q3ZCX4 644 aa17.37■□□□□ 0.37
ATG13-227ENST00000581416 FAM171A1Q5VUB5 890 aa17.37■□□□□ 0.37
ATG13-227ENST00000581416 LARP1BQ659C4 914 aaKnown RBP17.37■□□□□ 0.37
ATG13-227ENST00000581416 RSPO2Q6UXX9 243 aaPredicted RBP17.37■□□□□ 0.37
ATG13-227ENST00000581416 CCDC149Q6ZUS6 474 aa17.37■□□□□ 0.37
ATG13-227ENST00000581416 ZBTB33Q86T24 672 aa17.37■□□□□ 0.37
ATG13-227ENST00000581416 FBXL6Q8N531 539 aa17.37■□□□□ 0.37
ATG13-227ENST00000581416 PIK3R5Q8WYR1 880 aa17.37■□□□□ 0.37
ATG13-227ENST00000581416 NTPCRQ9BSD7 190 aaKnown RBP17.37■□□□□ 0.37
ATG13-227ENST00000581416 MRPL4Q9BYD3 311 aaKnown RBP17.37■□□□□ 0.37
ATG13-227ENST00000581416 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.37■□□□□ 0.37
ATG13-227ENST00000581416 FBXW11Q9UKB1 542 aa17.37■□□□□ 0.37
ATG13-227ENST00000581416 VPS13AQ96RL7 3174 aa17.36■□□□□ 0.37
ATG13-227ENST00000581416 PIEZO1Q92508 2521 aa17.36■□□□□ 0.37
ATG13-227ENST00000581416 SMIM28A0A1B0GU29 152 aa17.36■□□□□ 0.37
ATG13-227ENST00000581416 I3L4J1 428 aa17.36■□□□□ 0.37
ATG13-227ENST00000581416 C1RP00736 705 aa17.36■□□□□ 0.37
ATG13-227ENST00000581416 MAPTP10636 758 aaKnown RBP17.36■□□□□ 0.37
ATG13-227ENST00000581416 FGFR3P22607 806 aa17.36■□□□□ 0.37
ATG13-227ENST00000581416 NHLH1Q02575 133 aa17.36■□□□□ 0.37
ATG13-227ENST00000581416 MTMR3Q13615 1198 aa17.36■□□□□ 0.37
ATG13-227ENST00000581416 PSMD5Q16401 504 aa17.36■□□□□ 0.37
ATG13-227ENST00000581416 UPP1Q16831 310 aa17.36■□□□□ 0.37
ATG13-227ENST00000581416 SEZ6Q53EL9 994 aa17.36■□□□□ 0.37
ATG13-227ENST00000581416 SPIRE2Q8WWL2 714 aa17.36■□□□□ 0.37
ATG13-227ENST00000581416 SNX27Q96L92 541 aa17.36■□□□□ 0.37
ATG13-227ENST00000581416 TTPALQ9BTX7 342 aa17.36■□□□□ 0.37
ATG13-227ENST00000581416 TIPINQ9BVW5 301 aa17.36■□□□□ 0.37
ATG13-227ENST00000581416 NT5C3AQ9H0P0 336 aa17.36■□□□□ 0.37
ATG13-227ENST00000581416 C17orf75Q9HAS0 396 aa17.36■□□□□ 0.37
ATG13-227ENST00000581416 WDR6Q9NNW5 1121 aaKnown RBP17.36■□□□□ 0.37
ATG13-227ENST00000581416 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.36■□□□□ 0.37
ATG13-227ENST00000581416 MIA3Q5JRA6 1907 aa17.36■□□□□ 0.37
ATG13-227ENST00000581416 CLUHO75153 1309 aa17.36■□□□□ 0.37
ATG13-227ENST00000581416 SPDYE4A6NLX3 237 aa17.35■□□□□ 0.37
ATG13-227ENST00000581416 PLS3P13797 630 aa17.35■□□□□ 0.37
ATG13-227ENST00000581416 BRCC3P46736 316 aa17.35■□□□□ 0.37
ATG13-227ENST00000581416 MPZL3Q6UWV2 235 aa17.35■□□□□ 0.37
ATG13-227ENST00000581416 HDAC7Q8WUI4 952 aa17.35■□□□□ 0.37
ATG13-227ENST00000581416 SMG7Q92540 1137 aaKnown RBP17.35■□□□□ 0.37
ATG13-227ENST00000581416 MYADMQ96S97 322 aa17.35■□□□□ 0.37
ATG13-227ENST00000581416 MYO15AQ9UKN7 3530 aa17.34■□□□□ 0.37
ATG13-227ENST00000581416 MCF2P10911 925 aa17.34■□□□□ 0.37
ATG13-227ENST00000581416 HARSP12081 509 aaKnown RBP17.34■□□□□ 0.37
ATG13-227ENST00000581416 TKTP29401 623 aaKnown RBP17.34■□□□□ 0.37
ATG13-227ENST00000581416 NCKAP1LP55160 1127 aa17.34■□□□□ 0.37
ATG13-227ENST00000581416 TCF15Q12870 199 aa17.34■□□□□ 0.37
ATG13-227ENST00000581416 PTPAQ15257 358 aa17.34■□□□□ 0.37
ATG13-227ENST00000581416 SF3A1Q15459 793 aaKnown RBP17.34■□□□□ 0.37
ATG13-227ENST00000581416 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.34■□□□□ 0.37
ATG13-227ENST00000581416 USP49Q70CQ1 688 aa17.34■□□□□ 0.37
ATG13-227ENST00000581416 CEP57Q86XR8 500 aa17.34■□□□□ 0.37
ATG13-227ENST00000581416 UBALD2Q8IYN6 164 aa17.34■□□□□ 0.37
ATG13-227ENST00000581416 PLCD3Q8N3E9 789 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms