RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 ZFP42Q96MM3 310 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 MBOAT7Q96N66 472 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 CEP89Q96ST8 783 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 RIT2Q99578 217 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 MINDY3Q9H8M7 445 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 FBXW11Q9UKB1 542 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 ADAM28Q9UKQ2 775 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 TPCN1Q9ULQ1 816 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 NAP1L2Q9ULW6 460 aaPredicted RBP11.95□□□□□ -0.5
TOP3A-210ENST00000580713 HES2Q9Y543 173 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 IPPQ9Y573 584 aa11.95□□□□□ -0.5
TOP3A-210ENST00000580713 MTCL1Q9Y4B5 1905 aaKnown RBP11.95□□□□□ -0.5
TOP3A-210ENST00000580713 C2orf72A6NCS6 295 aa11.94□□□□□ -0.5
TOP3A-210ENST00000580713 GOLGA8AA7E2F4 631 aa11.94□□□□□ -0.5
TOP3A-210ENST00000580713 GOLGA8BA8MQT2 603 aa11.94□□□□□ -0.5
TOP3A-210ENST00000580713 PMLP29590 882 aa11.94□□□□□ -0.5
TOP3A-210ENST00000580713 FZD5Q13467 585 aa11.94□□□□□ -0.5
TOP3A-210ENST00000580713 DSG2Q14126 1118 aa11.94□□□□□ -0.5
TOP3A-210ENST00000580713 ACAP1Q15027 740 aa11.94□□□□□ -0.5
TOP3A-210ENST00000580713 AASDHQ4L235 1098 aaPredicted RBP11.94□□□□□ -0.5
TOP3A-210ENST00000580713 PLA2G4FQ68DD2 849 aa11.94□□□□□ -0.5
TOP3A-210ENST00000580713 NPAS3Q8IXF0 933 aa11.94□□□□□ -0.5
TOP3A-210ENST00000580713 GPR65Q8IYL9 337 aa11.94□□□□□ -0.5
TOP3A-210ENST00000580713 RDM1Q8NG50 284 aa11.94□□□□□ -0.5
TOP3A-210ENST00000580713 CCDC12Q8WUD4 166 aaPredicted RBP11.94□□□□□ -0.5
TOP3A-210ENST00000580713 LENG9Q96B70 501 aa11.94□□□□□ -0.5
TOP3A-210ENST00000580713 MCRS1Q96EZ8 462 aa11.94□□□□□ -0.5
TOP3A-210ENST00000580713 EIF2AQ9BY44 585 aaKnown RBP11.94□□□□□ -0.5
TOP3A-210ENST00000580713 CHRDQ9H2X0 955 aa11.94□□□□□ -0.5
TOP3A-210ENST00000580713 MRPS23Q9Y3D9 190 aaKnown RBP11.94□□□□□ -0.5
TOP3A-210ENST00000580713 KLF18A0A0U1RQI7 1052 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 MAN2B1O00754 1011 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 FOXD2O60548 495 aaPredicted RBP11.93□□□□□ -0.5
TOP3A-210ENST00000580713 STBD1O95210 358 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 LARGE1O95461 756 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 GNA11P29992 359 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 HOXA9P31269 272 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 CCR3P51677 355 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 NCBP1Q09161 790 aaKnown RBP11.93□□□□□ -0.5
TOP3A-210ENST00000580713 CUL4AQ13619 759 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 ME3Q16798 604 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 PFKFB3Q16875 520 aaPredicted RBP11.93□□□□□ -0.5
TOP3A-210ENST00000580713 PABPC1LQ4VXU2 614 aaKnown RBP11.93□□□□□ -0.5
TOP3A-210ENST00000580713 RTP2Q5QGT7 225 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 HACE1Q8IYU2 909 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 SLC7A14Q8TBB6 771 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 PRPF31Q8WWY3 499 aaKnown RBP11.93□□□□□ -0.5
TOP3A-210ENST00000580713 PSPC1Q8WXF1 523 aaKnown RBP11.93□□□□□ -0.5
TOP3A-210ENST00000580713 SLC7A3Q8WY07 619 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 SLC5A5Q92911 643 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 TMEM143Q96AN5 459 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 ZNF274Q96GC6 653 aaPredicted RBP11.93□□□□□ -0.5
TOP3A-210ENST00000580713 CPB2Q96IY4 423 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 PLA2G2FQ9BZM2 168 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 TRIM6Q9C030 488 aaPredicted RBP11.93□□□□□ -0.5
TOP3A-210ENST00000580713 ZMYND12Q9H0C1 365 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 BRD9Q9H8M2 597 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 LMAN1LQ9HAT1 526 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 HCFC1R1Q9NWW0 138 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 WDR81Q562E7 1941 aa11.93□□□□□ -0.5
TOP3A-210ENST00000580713 SF3B1O75533 1304 aaKnown RBP eCLIP11.92□□□□□ -0.58e-6■■■■■ 107
TOP3A-210ENST00000580713 ESYT2A0FGR8 921 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 CHURC1-FNTBB4DL54 471 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 PFKFB2O60825 505 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 ECI2O75521 394 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 PROS1P07225 676 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 TDGF1P13385 188 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 CXCL12P48061 93 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 FNTBP49356 437 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 NPEPPSP55786 919 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 EVCP57679 992 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 SHC2P98077 582 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 LAMTOR4Q0VGL1 99 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 STK3Q13188 491 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 SRSF5Q13243 272 aaKnown RBP11.92□□□□□ -0.5
TOP3A-210ENST00000580713 PSMD5Q16401 504 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 AXDND1Q5T1B0 1012 aaPredicted RBP11.92□□□□□ -0.5
TOP3A-210ENST00000580713 NOTUMQ6P988 496 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 ANO5Q75V66 913 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 CEP68Q76N32 757 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 C12orf50Q8NA57 414 aaPredicted RBP11.92□□□□□ -0.5
TOP3A-210ENST00000580713 RNF149Q8NC42 400 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 BICD2Q8TD16 824 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 HASPINQ8TF76 798 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 MARVELD3Q96A59 401 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 CLSTN3Q9BQT9 956 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 IER2Q9BTL4 223 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 TTPALQ9BTX7 342 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 SLKQ9H2G2 1235 aaPredicted RBP11.92□□□□□ -0.5
TOP3A-210ENST00000580713 DNMT3BQ9UBC3 853 aaKnown RBP11.92□□□□□ -0.5
TOP3A-210ENST00000580713 BRPF3Q9ULD4 1205 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 KCNH3Q9ULD8 1083 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 GIT1Q9Y2X7 761 aa11.92□□□□□ -0.5
TOP3A-210ENST00000580713 F5P12259 2224 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 RALGAPA1Q6GYQ0 2036 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 HRO43593 1189 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 PSMD10O75832 226 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 AKAP5P24588 427 aa11.91□□□□□ -0.5
TOP3A-210ENST00000580713 PDIA3P30101 505 aaKnown RBP11.91□□□□□ -0.5
TOP3A-210ENST00000580713 CDC27P30260 824 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms