RNA–Protein interactions for RNA: ENST00000580171.2

RN7SL336P-201, Transcript of RNA, 7SL, cytoplasmic 336, pseudogene, humanhuman

BASIC

Gene RN7SL336P, Length 297 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL336P-201ENST00000580171 PCDHB6Q9Y5E3 794 aa12.6□□□□□ -0.39
RN7SL336P-201ENST00000580171 PLXNA3P51805 1871 aa12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 GALR2O43603 387 aaPredicted RBP12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 TRAPPC3O43617 180 aa12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 ZMYND10O75800 440 aa12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 EDN1P05305 212 aa12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 HNRNPA1P09651 372 aaKnown RBP eCLIP12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 SPATA31D3P0C874 917 aa12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 MYBP10242 640 aa12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 RPL17P18621 184 aaKnown RBP12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 TOB1P50616 345 aaPredicted RBP12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 CLCN5P51795 746 aa12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 PEX3P56589 373 aa12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 ECM1Q16610 540 aa12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 GLRA4Q5JXX5 417 aa12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 PRSS55Q6UWB4 352 aaPredicted RBP12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 SPATA31D4Q6ZUB0 917 aa12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 KCTD17Q8N5Z5 321 aa12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 ATOH1Q92858 354 aaPredicted RBP12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 NXPE3Q969Y0 559 aa12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 PRKD2Q9BZL6 878 aa12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 NT5C3AQ9H0P0 336 aa12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 C17orf75Q9HAS0 396 aa12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 KMT5AQ9NQR1 393 aa12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 SLC38A7Q9NVC3 462 aa12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 USP20Q9Y2K6 914 aa12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 RBM19Q9Y4C8 960 aaKnown RBP12.59□□□□□ -0.39
RN7SL336P-201ENST00000580171 CACNA1HO95180 2353 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 C2orf16Q68DN1 1984 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 PP2D1A8MPX8 630 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 E9PMD0 336 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 H3BQV1 296 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 N4BP1O75113 896 aaKnown RBP12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 HIP1RO75146 1068 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 XYLBO75191 536 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 B3GAT3O94766 335 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 C8AP07357 584 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 RFX1P22670 979 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 HOXA9P31269 272 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 GRM5P41594 1212 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 NPTX2P47972 431 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 ZRSR1Q15695 479 aaKnown RBP12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 NAB2Q15742 525 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 PPM1LQ5SGD2 360 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 NT5DC1Q5TFE4 455 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 LILRA6Q6PI73 481 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 TMEM105Q8N8V8 129 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 FLCNQ8NFG4 579 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 LNX1Q8TBB1 728 aaPredicted RBP12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 CDK5RAP3Q96JB5 506 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 PPP1R10Q96QC0 940 aaKnown RBP12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 CDT1Q9H211 546 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 TMEM134Q9H6X4 195 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 ARHGAP28Q9P2N2 729 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 KCNG1Q9UIX4 513 aa12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 ZFP37Q9Y6Q3 630 aaPredicted RBP12.58□□□□□ -0.4
RN7SL336P-201ENST00000580171 MCF2P10911 925 aa12.57□□□□□ -0.4
RN7SL336P-201ENST00000580171 SRFP11831 508 aa12.57□□□□□ -0.4
RN7SL336P-201ENST00000580171 AOC1P19801 751 aa12.57□□□□□ -0.4
RN7SL336P-201ENST00000580171 GUCY2CP25092 1073 aa12.57□□□□□ -0.4
RN7SL336P-201ENST00000580171 ATP2C1P98194 919 aaPredicted RBP12.57□□□□□ -0.4
RN7SL336P-201ENST00000580171 STRN3Q13033 797 aa12.57□□□□□ -0.4
RN7SL336P-201ENST00000580171 CWF19L1Q69YN2 538 aaKnown RBP12.57□□□□□ -0.4
RN7SL336P-201ENST00000580171 DCLRE1AQ6PJP8 1040 aa12.57□□□□□ -0.4
RN7SL336P-201ENST00000580171 DAW1Q8N136 415 aa12.57□□□□□ -0.4
RN7SL336P-201ENST00000580171 SIX5Q8N196 739 aa12.57□□□□□ -0.4
RN7SL336P-201ENST00000580171 DDX27Q96GQ7 796 aaKnown RBP12.57□□□□□ -0.4
RN7SL336P-201ENST00000580171 MYADMQ96S97 322 aa12.57□□□□□ -0.4
RN7SL336P-201ENST00000580171 ACO2Q99798 780 aaKnown RBP12.57□□□□□ -0.4
RN7SL336P-201ENST00000580171 CLSTN3Q9BQT9 956 aa12.57□□□□□ -0.4
RN7SL336P-201ENST00000580171 TCHPQ9BT92 498 aa12.57□□□□□ -0.4
RN7SL336P-201ENST00000580171 RUSC1Q9BVN2 902 aa12.57□□□□□ -0.4
RN7SL336P-201ENST00000580171 POLD4Q9HCU8 107 aa12.57□□□□□ -0.4
RN7SL336P-201ENST00000580171 FAM86C1Q9NVL1 165 aa12.57□□□□□ -0.4
RN7SL336P-201ENST00000580171 KCND2Q9NZV8 630 aa12.57□□□□□ -0.4
RN7SL336P-201ENST00000580171 MTRRQ9UBK8 725 aa12.57□□□□□ -0.4
RN7SL336P-201ENST00000580171 H0Y858 1186 aa12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 POU2F2P09086 479 aa12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 LAMP2P13473 410 aa12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 FGFR3P22607 806 aa12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 FSHRP23945 695 aa12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 CDC25AP30304 524 aa12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 MCM2P49736 904 aa12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 CLCNKBP51801 687 aa12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 SMTNP53814 917 aa12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 UPP1Q16831 310 aa12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 ARL6IP4Q66PJ3 421 aaKnown RBP12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 RINT1Q6NUQ1 792 aa12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 MPZL3Q6UWV2 235 aa12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 ANKS3Q6ZW76 656 aa12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 RTL10Q7L3V2 364 aa12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 CEP120Q8N960 986 aa12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 SLC7A14Q8TBB6 771 aa12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 TMX3Q96JJ7 454 aa12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 SNX27Q96L92 541 aa12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 PHOX2BQ99453 314 aa12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 RTP3Q9BQQ7 232 aa12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 TARS2Q9BW92 718 aaKnown RBP12.56□□□□□ -0.4
RN7SL336P-201ENST00000580171 CXCL16Q9H2A7 254 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms